BLASTX nr result

ID: Cornus23_contig00040215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00040215
         (826 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010648850.1| PREDICTED: GRIP and coiled-coil domain-conta...    62   5e-07
ref|XP_010648849.1| PREDICTED: GRIP and coiled-coil domain-conta...    61   1e-06
ref|XP_010648847.1| PREDICTED: GRIP and coiled-coil domain-conta...    60   2e-06
ref|XP_010648845.1| PREDICTED: GRIP and coiled-coil domain-conta...    60   2e-06
emb|CBI24010.3| unnamed protein product [Vitis vinifera]               60   2e-06
ref|XP_002324946.2| hypothetical protein POPTR_0018s03440g [Popu...    59   3e-06
ref|XP_010648851.1| PREDICTED: GRIP and coiled-coil domain-conta...    58   9e-06

>ref|XP_010648850.1| PREDICTED: GRIP and coiled-coil domain-containing protein 2 isoform
            X4 [Vitis vinifera]
          Length = 2856

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 87/313 (27%), Positives = 129/313 (41%), Gaps = 44/313 (14%)
 Frame = -1

Query: 808  VESSLANNVEVPLEHSRVGEAVLKLSVGEEEHVGSLATYEGESSCIVDPKDTTSFTHVRS 629
            VE    +  E+PLE S VGE            V S  + +GES  I +P+     +   S
Sbjct: 117  VEKFSTDYTELPLEGSGVGE----------NDVDSSVSNKGESIPIANPEVAIVGSLGDS 166

Query: 628  EE-----DSLPVGLAVAVEFLAP-----------LDLVDAVKPDANAIEADCAQGEDL-- 503
            E      +S+   +   V+ LAP           LD V    P         +  E+   
Sbjct: 167  EMAVSGGESIHANMREPVDVLAPPASVDDAREQLLDTVGTWSPRLEEERELLSSQEEFPD 226

Query: 502  ---------EADHSGSKRVGQSTGIELELDGSLALPGFGECAETHAGTTSAEMGLKEATL 350
                     EA+  GSK++ +S+ IE+E    LAL       ET A   S    ++EAT 
Sbjct: 227  LSLIPRQYQEAESLGSKQLDRSSEIEIEGGVKLALSELRGSVETLAREASEVTVMEEATH 286

Query: 349  VAEQTNKLD---VSASSGVTNEVGSQGIDGHLFPP---QPLPESDGSSAVTPDATDQQSA 188
              EQ+   D    SAS+G  +EV  + I      P   Q +PE D S  ++ + T+QQ A
Sbjct: 287  EEEQSGDADDVSASASAGAPDEVEDKEIHRRDKVPVSGQAIPEVDDSLTISSEVTNQQRA 346

Query: 187  DVVAASLNXXXXXXXELPSTSNDFGSYCTERV-----------LADKQDITVGAKQLISK 41
            DV  +S N       E+ S S D GS   ER            +  ++ +  G+   +S+
Sbjct: 347  DVDVSSSN---EEEMEMLSRSGDTGSNWKERAQPGAKGRKGDEVYQQEGLPEGS--FVSE 401

Query: 40   GHSQEWPLASKMV 2
              S E PL +K++
Sbjct: 402  DKSHERPLETKIL 414


>ref|XP_010648849.1| PREDICTED: GRIP and coiled-coil domain-containing protein 2 isoform
            X3 [Vitis vinifera]
          Length = 2859

 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 87/316 (27%), Positives = 129/316 (40%), Gaps = 47/316 (14%)
 Frame = -1

Query: 808  VESSLANNVEVPLEHSRVGEAVLKLSVGEEEHVGSLATYEGESSCIVDPKDTTSFTHVRS 629
            VE    +  E+PLE S VG          E  V S  + +GES  I +P+     +   S
Sbjct: 117  VEKFSTDYTELPLEGSGVG----------ENDVDSSVSNKGESIPIANPEVAIVGSLGDS 166

Query: 628  E-----EDSLPVGLAVAVEFLAP-----------LDLVDAVKPDANAIEADCAQGEDL-- 503
            E      +S+   +   V+ LAP           LD V    P         +  E+   
Sbjct: 167  EMAVSGGESIHANMREPVDVLAPPASVDDAREQLLDTVGTWSPRLEEERELLSSQEEFPD 226

Query: 502  ------------EADHSGSKRVGQSTGIELELDGSLALPGFGECAETHAGTTSAEMGLKE 359
                        EA+  GSK++ +S+ IE+E    LAL       ET A   S    ++E
Sbjct: 227  LSLIPRQYQVTDEAESLGSKQLDRSSEIEIEGGVKLALSELRGSVETLAREASEVTVMEE 286

Query: 358  ATLVAEQTNKLD---VSASSGVTNEVGSQGIDGHLFPP---QPLPESDGSSAVTPDATDQ 197
            AT   EQ+   D    SAS+G  +EV  + I      P   Q +PE D S  ++ + T+Q
Sbjct: 287  ATHEEEQSGDADDVSASASAGAPDEVEDKEIHRRDKVPVSGQAIPEVDDSLTISSEVTNQ 346

Query: 196  QSADVVAASLNXXXXXXXELPSTSNDFGSYCTERV-----------LADKQDITVGAKQL 50
            Q ADV  +S N       E+ S S D GS   ER            +  ++ +  G+   
Sbjct: 347  QRADVDVSSSN---EEEMEMLSRSGDTGSNWKERAQPGAKGRKGDEVYQQEGLPEGS--F 401

Query: 49   ISKGHSQEWPLASKMV 2
            +S+  S E PL +K++
Sbjct: 402  VSEDKSHERPLETKIL 417


>ref|XP_010648847.1| PREDICTED: GRIP and coiled-coil domain-containing protein 2 isoform
            X2 [Vitis vinifera]
          Length = 2860

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 88/321 (27%), Positives = 130/321 (40%), Gaps = 52/321 (16%)
 Frame = -1

Query: 808  VESSLANNVEVPLEHSRVGEAVLKLSVGEEEHVGSLATYEGESSCIVDPKDTTSFTHVRS 629
            VE    +  E+PLE S VGE            V S  + +GES  I +P+     +   S
Sbjct: 117  VEKFSTDYTELPLEGSGVGE----------NDVDSSVSNKGESIPIANPEVAIVGSLGDS 166

Query: 628  EE-----DSLPVGLAVAVEFLAPLDLVDAVK---------------------------PD 545
            E      +S+   +   V+ LAP   VD  +                           PD
Sbjct: 167  EMAVSGGESIHANMREPVDVLAPPASVDDAREQLLDTVGTWSPRLEEERELLSSQEEFPD 226

Query: 544  ANAIEADCAQ---GEDLEADHSGSKRVGQSTGIELELDGSLALPGFGECAETHAGTTSAE 374
             + I         G   EA+  GSK++ +S+ IE+E    LAL       ET A   S  
Sbjct: 227  LSLIPRQYQVTDVGAMQEAESLGSKQLDRSSEIEIEGGVKLALSELRGSVETLAREASEV 286

Query: 373  MGLKEATLVAEQTNKLD---VSASSGVTNEVGSQGIDGHLFPP---QPLPESDGSSAVTP 212
              ++EAT   EQ+   D    SAS+G  +EV  + I      P   Q +PE D S  ++ 
Sbjct: 287  TVMEEATHEEEQSGDADDVSASASAGAPDEVEDKEIHRRDKVPVSGQAIPEVDDSLTISS 346

Query: 211  DATDQQSADVVAASLNXXXXXXXELPSTSNDFGSYCTERV-----------LADKQDITV 65
            + T+QQ ADV  +S N       E+ S S D GS   ER            +  ++ +  
Sbjct: 347  EVTNQQRADVDVSSSN---EEEMEMLSRSGDTGSNWKERAQPGAKGRKGDEVYQQEGLPE 403

Query: 64   GAKQLISKGHSQEWPLASKMV 2
            G+   +S+  S E PL +K++
Sbjct: 404  GS--FVSEDKSHERPLETKIL 422


>ref|XP_010648845.1| PREDICTED: GRIP and coiled-coil domain-containing protein 2 isoform
            X1 [Vitis vinifera] gi|731386347|ref|XP_010648846.1|
            PREDICTED: GRIP and coiled-coil domain-containing protein
            2 isoform X1 [Vitis vinifera]
          Length = 2864

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 88/321 (27%), Positives = 130/321 (40%), Gaps = 52/321 (16%)
 Frame = -1

Query: 808  VESSLANNVEVPLEHSRVGEAVLKLSVGEEEHVGSLATYEGESSCIVDPKDTTSFTHVRS 629
            VE    +  E+PLE S VGE            V S  + +GES  I +P+     +   S
Sbjct: 117  VEKFSTDYTELPLEGSGVGE----------NDVDSSVSNKGESIPIANPEVAIVGSLGDS 166

Query: 628  EE-----DSLPVGLAVAVEFLAPLDLVDAVK---------------------------PD 545
            E      +S+   +   V+ LAP   VD  +                           PD
Sbjct: 167  EMAVSGGESIHANMREPVDVLAPPASVDDAREQLLDTVGTWSPRLEEERELLSSQEEFPD 226

Query: 544  ANAIEADCAQ---GEDLEADHSGSKRVGQSTGIELELDGSLALPGFGECAETHAGTTSAE 374
             + I         G   EA+  GSK++ +S+ IE+E    LAL       ET A   S  
Sbjct: 227  LSLIPRQYQVTDVGAMQEAESLGSKQLDRSSEIEIEGGVKLALSELRGSVETLAREASEV 286

Query: 373  MGLKEATLVAEQTNKLD---VSASSGVTNEVGSQGIDGHLFPP---QPLPESDGSSAVTP 212
              ++EAT   EQ+   D    SAS+G  +EV  + I      P   Q +PE D S  ++ 
Sbjct: 287  TVMEEATHEEEQSGDADDVSASASAGAPDEVEDKEIHRRDKVPVSGQAIPEVDDSLTISS 346

Query: 211  DATDQQSADVVAASLNXXXXXXXELPSTSNDFGSYCTERV-----------LADKQDITV 65
            + T+QQ ADV  +S N       E+ S S D GS   ER            +  ++ +  
Sbjct: 347  EVTNQQRADVDVSSSN---EEEMEMLSRSGDTGSNWKERAQPGAKGRKGDEVYQQEGLPE 403

Query: 64   GAKQLISKGHSQEWPLASKMV 2
            G+   +S+  S E PL +K++
Sbjct: 404  GS--FVSEDKSHERPLETKIL 422


>emb|CBI24010.3| unnamed protein product [Vitis vinifera]
          Length = 1298

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 88/321 (27%), Positives = 130/321 (40%), Gaps = 52/321 (16%)
 Frame = -1

Query: 808 VESSLANNVEVPLEHSRVGEAVLKLSVGEEEHVGSLATYEGESSCIVDPKDTTSFTHVRS 629
           VE    +  E+PLE S VGE            V S  + +GES  I +P+     +   S
Sbjct: 24  VEKFSTDYTELPLEGSGVGE----------NDVDSSVSNKGESIPIANPEVAIVGSLGDS 73

Query: 628 EE-----DSLPVGLAVAVEFLAPLDLVDAVK---------------------------PD 545
           E      +S+   +   V+ LAP   VD  +                           PD
Sbjct: 74  EMAVSGGESIHANMREPVDVLAPPASVDDAREQLLDTVGTWSPRLEEERELLSSQEEFPD 133

Query: 544 ANAIEADCAQ---GEDLEADHSGSKRVGQSTGIELELDGSLALPGFGECAETHAGTTSAE 374
            + I         G   EA+  GSK++ +S+ IE+E    LAL       ET A   S  
Sbjct: 134 LSLIPRQYQVTDVGAMQEAESLGSKQLDRSSEIEIEGGVKLALSELRGSVETLAREASEV 193

Query: 373 MGLKEATLVAEQTNKLD---VSASSGVTNEVGSQGIDGHLFPP---QPLPESDGSSAVTP 212
             ++EAT   EQ+   D    SAS+G  +EV  + I      P   Q +PE D S  ++ 
Sbjct: 194 TVMEEATHEEEQSGDADDVSASASAGAPDEVEDKEIHRRDKVPVSGQAIPEVDDSLTISS 253

Query: 211 DATDQQSADVVAASLNXXXXXXXELPSTSNDFGSYCTERV-----------LADKQDITV 65
           + T+QQ ADV  +S N       E+ S S D GS   ER            +  ++ +  
Sbjct: 254 EVTNQQRADVDVSSSN---EEEMEMLSRSGDTGSNWKERAQPGAKGRKGDEVYQQEGLPE 310

Query: 64  GAKQLISKGHSQEWPLASKMV 2
           G+   +S+  S E PL +K++
Sbjct: 311 GS--FVSEDKSHERPLETKIL 329


>ref|XP_002324946.2| hypothetical protein POPTR_0018s03440g [Populus trichocarpa]
           gi|550317945|gb|EEF03511.2| hypothetical protein
           POPTR_0018s03440g [Populus trichocarpa]
          Length = 2804

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 41/235 (17%)
 Frame = -1

Query: 778 VPLE-HSRVGEAVLKLSVG--------EEEHVGSLATYEGESSCIVDPKDTT-----SFT 641
           +PL   +RV E  L    G        +E H+ S    EGESS  +D K        S  
Sbjct: 107 IPLTPETRVAETALDHDAGSAAEEGGADENHIDSSKPDEGESSQSIDDKAARVVPLGSSD 166

Query: 640 HVRSEEDSLPVGLAVAVEFLAPLDLVDAVK--------------------------PDAN 539
              SE  +      V+V+  AP  L+D +                           PD +
Sbjct: 167 IPDSEAKTKHDDAFVSVDVSAPHKLIDTMDGTTVTGETESQDGEDGMWPLPPQEDTPDTS 226

Query: 538 AIEADCAQGEDLEADHSGSKRVGQSTGIELELDGSLALPGFGECAETHAGTTSAEMGLKE 359
           +I+A   Q  D EAD   SK  G S+ +ELE D  L+  G GE A+    T S ++ ++E
Sbjct: 227 SIQARGNQVTD-EADGLDSKHFGGSSDLELEGDRRLSFSGRGEIAKCAGETASEQIHVEE 285

Query: 358 ATL-VAEQTNKLDVSASSGVTNEVGSQGIDGHLFPPQPLPESDGSSAVTPDATDQ 197
           A    ++Q++ +D ++ S    ++     DG +    P+ E+DGS+ V  +AT+Q
Sbjct: 286 AAASQSKQSDGVDDASVSASATDMS----DGLVASTLPISEADGSAGVIHEATNQ 336


>ref|XP_010648851.1| PREDICTED: GRIP and coiled-coil domain-containing protein 2 isoform
           X5 [Vitis vinifera] gi|731386357|ref|XP_010648852.1|
           PREDICTED: GRIP and coiled-coil domain-containing
           protein 2 isoform X5 [Vitis vinifera]
          Length = 2623

 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
 Frame = -1

Query: 502 EADHSGSKRVGQSTGIELELDGSLALPGFGECAETHAGTTSAEMGLKEATLVAEQTNKLD 323
           EA+  GSK++ +S+ IE+E    LAL       ET A   S    ++EAT   EQ+   D
Sbjct: 3   EAESLGSKQLDRSSEIEIEGGVKLALSELRGSVETLAREASEVTVMEEATHEEEQSGDAD 62

Query: 322 ---VSASSGVTNEVGSQGIDGHLFPP---QPLPESDGSSAVTPDATDQQSADVVAASLNX 161
               SAS+G  +EV  + I      P   Q +PE D S  ++ + T+QQ ADV  +S N 
Sbjct: 63  DVSASASAGAPDEVEDKEIHRRDKVPVSGQAIPEVDDSLTISSEVTNQQRADVDVSSSN- 121

Query: 160 XXXXXXELPSTSNDFGSYCTERV-----------LADKQDITVGAKQLISKGHSQEWPLA 14
                 E+ S S D GS   ER            +  ++ +  G+   +S+  S E PL 
Sbjct: 122 --EEEMEMLSRSGDTGSNWKERAQPGAKGRKGDEVYQQEGLPEGS--FVSEDKSHERPLE 177

Query: 13  SKMV 2
           +K++
Sbjct: 178 TKIL 181


Top