BLASTX nr result
ID: Cornus23_contig00040195
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00040195
(370 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006341274.1| PREDICTED: putative E3 ubiquitin-protein lig... 89 2e-15
ref|XP_009788942.1| PREDICTED: putative E3 ubiquitin-protein lig... 85 2e-14
ref|XP_009788941.1| PREDICTED: putative E3 ubiquitin-protein lig... 85 2e-14
ref|XP_009788939.1| PREDICTED: putative E3 ubiquitin-protein lig... 85 2e-14
ref|XP_009606222.1| PREDICTED: putative E3 ubiquitin-protein lig... 84 4e-14
ref|XP_009606221.1| PREDICTED: putative E3 ubiquitin-protein lig... 84 4e-14
ref|XP_007013113.1| Transducin/WD40 repeat-like superfamily prot... 83 7e-14
ref|XP_010656298.1| PREDICTED: putative E3 ubiquitin-protein lig... 82 1e-13
ref|XP_010656297.1| PREDICTED: putative E3 ubiquitin-protein lig... 82 1e-13
emb|CBI28040.3| unnamed protein product [Vitis vinifera] 82 1e-13
emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera] 82 1e-13
ref|XP_011078302.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ... 82 2e-13
ref|XP_010323418.1| PREDICTED: putative E3 ubiquitin-protein lig... 80 5e-13
ref|XP_010323417.1| PREDICTED: putative E3 ubiquitin-protein lig... 80 5e-13
ref|XP_010323416.1| PREDICTED: putative E3 ubiquitin-protein lig... 80 5e-13
ref|XP_010050571.1| PREDICTED: putative E3 ubiquitin-protein lig... 78 2e-12
gb|KCW79938.1| hypothetical protein EUGRSUZ_C01271 [Eucalyptus g... 78 2e-12
gb|KDO66445.1| hypothetical protein CISIN_1g001349mg [Citrus sin... 77 5e-12
gb|KDO66444.1| hypothetical protein CISIN_1g001349mg [Citrus sin... 77 5e-12
ref|XP_006451205.1| hypothetical protein CICLE_v10007255mg [Citr... 77 5e-12
>ref|XP_006341274.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Solanum
tuberosum]
Length = 1284
Score = 88.6 bits (218), Expect = 2e-15
Identities = 40/51 (78%), Positives = 46/51 (90%)
Frame = -2
Query: 369 IVEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
IVEAWC+KKH RVETLQTG+ SK++CMALD +EE LVIGTSDGRIQAW +S
Sbjct: 1234 IVEAWCKKKHNRVETLQTGINSKVVCMALDTNEETLVIGTSDGRIQAWRLS 1284
>ref|XP_009788942.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X3
[Nicotiana sylvestris]
Length = 1274
Score = 84.7 bits (208), Expect = 2e-14
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -2
Query: 369 IVEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
I+E WC+KKH RVE LQTG+ KILCMALD +EE LVIGTSDGRIQ WG+S
Sbjct: 1224 ILEVWCKKKHNRVEALQTGINGKILCMALDVNEETLVIGTSDGRIQVWGLS 1274
>ref|XP_009788941.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X2
[Nicotiana sylvestris]
Length = 1310
Score = 84.7 bits (208), Expect = 2e-14
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -2
Query: 369 IVEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
I+E WC+KKH RVE LQTG+ KILCMALD +EE LVIGTSDGRIQ WG+S
Sbjct: 1260 ILEVWCKKKHNRVEALQTGINGKILCMALDVNEETLVIGTSDGRIQVWGLS 1310
>ref|XP_009788939.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X1
[Nicotiana sylvestris]
Length = 1311
Score = 84.7 bits (208), Expect = 2e-14
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -2
Query: 369 IVEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
I+E WC+KKH RVE LQTG+ KILCMALD +EE LVIGTSDGRIQ WG+S
Sbjct: 1261 ILEVWCKKKHNRVEALQTGINGKILCMALDVNEETLVIGTSDGRIQVWGLS 1311
>ref|XP_009606222.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X2
[Nicotiana tomentosiformis]
Length = 1273
Score = 84.0 bits (206), Expect = 4e-14
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2
Query: 369 IVEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
I+E WC+KKH RVE LQTG+ K+LCMALD +EE LVIGTSDGRIQ WG+S
Sbjct: 1223 ILEVWCKKKHNRVEALQTGINGKLLCMALDVNEETLVIGTSDGRIQVWGLS 1273
>ref|XP_009606221.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X1
[Nicotiana tomentosiformis]
Length = 1310
Score = 84.0 bits (206), Expect = 4e-14
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2
Query: 369 IVEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
I+E WC+KKH RVE LQTG+ K+LCMALD +EE LVIGTSDGRIQ WG+S
Sbjct: 1260 ILEVWCKKKHNRVEALQTGINGKLLCMALDVNEETLVIGTSDGRIQVWGLS 1310
>ref|XP_007013113.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
gi|508783476|gb|EOY30732.1| Transducin/WD40 repeat-like
superfamily protein [Theobroma cacao]
Length = 1332
Score = 83.2 bits (204), Expect = 7e-14
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -2
Query: 369 IVEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
IVE W +KKH R+E LQTG SK+LCM LD +EEVLVIGTSDGRIQAWG+S
Sbjct: 1282 IVEVWDQKKHTRIEILQTGTNSKVLCMTLDANEEVLVIGTSDGRIQAWGLS 1332
>ref|XP_010656298.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X2
[Vitis vinifera]
Length = 1074
Score = 82.4 bits (202), Expect = 1e-13
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2
Query: 366 VEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
VE WCRKK IRVETLQTG K+ CMA+D DEEVLV+GTSDGRIQAW +S
Sbjct: 1025 VEIWCRKKLIRVETLQTGTNGKVQCMAVDGDEEVLVVGTSDGRIQAWELS 1074
>ref|XP_010656297.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X1
[Vitis vinifera]
Length = 1339
Score = 82.4 bits (202), Expect = 1e-13
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2
Query: 366 VEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
VE WCRKK IRVETLQTG K+ CMA+D DEEVLV+GTSDGRIQAW +S
Sbjct: 1290 VEIWCRKKLIRVETLQTGTNGKVQCMAVDGDEEVLVVGTSDGRIQAWELS 1339
>emb|CBI28040.3| unnamed protein product [Vitis vinifera]
Length = 1154
Score = 82.4 bits (202), Expect = 1e-13
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2
Query: 366 VEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
VE WCRKK IRVETLQTG K+ CMA+D DEEVLV+GTSDGRIQAW +S
Sbjct: 1105 VEIWCRKKLIRVETLQTGTNGKVQCMAVDGDEEVLVVGTSDGRIQAWELS 1154
>emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]
Length = 1618
Score = 82.4 bits (202), Expect = 1e-13
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -2
Query: 366 VEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
VE WCRKK IRVETLQTG K+ CMA+D DEEVLV+GTSDGRIQAW +S
Sbjct: 1569 VEIWCRKKLIRVETLQTGTNGKVQCMAVDGDEEVLVVGTSDGRIQAWELS 1618
>ref|XP_011078302.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein ligase
LIN [Sesamum indicum]
Length = 1325
Score = 81.6 bits (200), Expect = 2e-13
Identities = 35/50 (70%), Positives = 43/50 (86%)
Frame = -2
Query: 366 VEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
VE WCRKKH RVETLQ T+KILCMA+D +E++L+IGTSDGRIQ WG++
Sbjct: 1276 VEVWCRKKHSRVETLQVSSTAKILCMAIDANEDMLIIGTSDGRIQTWGLN 1325
>ref|XP_010323418.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X3
[Solanum lycopersicum]
Length = 940
Score = 80.5 bits (197), Expect = 5e-13
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = -2
Query: 369 IVEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
IVEAWC+KKH RV+TLQTG+ K++ MALD +EE LVIGTSDGRIQ W +S
Sbjct: 890 IVEAWCKKKHNRVDTLQTGINGKVVSMALDTNEETLVIGTSDGRIQVWRLS 940
>ref|XP_010323417.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X2
[Solanum lycopersicum]
Length = 1038
Score = 80.5 bits (197), Expect = 5e-13
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = -2
Query: 369 IVEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
IVEAWC+KKH RV+TLQTG+ K++ MALD +EE LVIGTSDGRIQ W +S
Sbjct: 988 IVEAWCKKKHNRVDTLQTGINGKVVSMALDTNEETLVIGTSDGRIQVWRLS 1038
>ref|XP_010323416.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X1
[Solanum lycopersicum]
Length = 1039
Score = 80.5 bits (197), Expect = 5e-13
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = -2
Query: 369 IVEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
IVEAWC+KKH RV+TLQTG+ K++ MALD +EE LVIGTSDGRIQ W +S
Sbjct: 989 IVEAWCKKKHNRVDTLQTGINGKVVSMALDTNEETLVIGTSDGRIQVWRLS 1039
>ref|XP_010050571.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Eucalyptus
grandis]
Length = 1321
Score = 78.2 bits (191), Expect = 2e-12
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = -2
Query: 369 IVEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
IVE WC++ H RVETLQ+G +KI CMAL+ DEE LVIGTSDG IQAWG+S
Sbjct: 1271 IVEVWCKENHQRVETLQSGTNAKIHCMALNADEEFLVIGTSDGWIQAWGLS 1321
>gb|KCW79938.1| hypothetical protein EUGRSUZ_C01271 [Eucalyptus grandis]
Length = 1172
Score = 78.2 bits (191), Expect = 2e-12
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = -2
Query: 369 IVEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
IVE WC++ H RVETLQ+G +KI CMAL+ DEE LVIGTSDG IQAWG+S
Sbjct: 1122 IVEVWCKENHQRVETLQSGTNAKIHCMALNADEEFLVIGTSDGWIQAWGLS 1172
>gb|KDO66445.1| hypothetical protein CISIN_1g001349mg [Citrus sinensis]
Length = 949
Score = 77.0 bits (188), Expect = 5e-12
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = -2
Query: 366 VEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
VE W +K+ IR+ETLQTG + K+ CMALD +EE LVIGTSDGRIQAWG+S
Sbjct: 900 VEIWDQKRQIRIETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQAWGLS 949
>gb|KDO66444.1| hypothetical protein CISIN_1g001349mg [Citrus sinensis]
Length = 1094
Score = 77.0 bits (188), Expect = 5e-12
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = -2
Query: 366 VEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
VE W +K+ IR+ETLQTG + K+ CMALD +EE LVIGTSDGRIQAWG+S
Sbjct: 1045 VEIWDQKRQIRIETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQAWGLS 1094
>ref|XP_006451205.1| hypothetical protein CICLE_v10007255mg [Citrus clementina]
gi|557554431|gb|ESR64445.1| hypothetical protein
CICLE_v10007255mg [Citrus clementina]
Length = 1380
Score = 77.0 bits (188), Expect = 5e-12
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = -2
Query: 366 VEAWCRKKHIRVETLQTGVTSKILCMALDRDEEVLVIGTSDGRIQAWGVS 217
VE W +K+ IR+ETLQTG + K+ CMALD +EE LVIGTSDGRIQAWG+S
Sbjct: 1331 VEIWDQKRQIRIETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQAWGLS 1380