BLASTX nr result
ID: Cornus23_contig00039838
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cornus23_contig00039838 (313 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EFL06024.1| conserved hypothetical protein [Streptomyces sp. ... 65 3e-14 emb|CNJ48920.1| Uncharacterised protein [Mycobacterium tuberculo... 74 4e-11 gb|EID19495.1| hypothetical protein HMPREF1043_0707 [Streptococc... 62 2e-10 gb|KPM07194.1| hypothetical protein QR98_0056810 [Sarcoptes scab... 44 4e-07 dbj|BAC18353.1| conserved hypothetical protein [Corynebacterium ... 57 4e-06 >gb|EFL06024.1| conserved hypothetical protein [Streptomyces sp. AA4] Length = 195 Score = 64.7 bits (156), Expect(2) = 3e-14 Identities = 46/84 (54%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Frame = +3 Query: 3 RGFSRQHGITLLR----LKRLCVTSQPNGARICLDTGLHACTSTTTHWRSYPPASPHRLA 170 RGFSRQH IT RL V Q RICL LHA T TT WRSY PASPHRL Sbjct: 14 RGFSRQHRITHFASHGYASRLRVCEQ----RICLLFLLHAYTRTTIAWRSYLPASPHRLT 69 Query: 171 TTRQGPALPC-SVPEG-TCRFGRL 236 TT GP L PEG T FG L Sbjct: 70 TTESGPTLHTPDPPEGFTSGFGWL 93 Score = 40.0 bits (92), Expect(2) = 3e-14 Identities = 17/25 (68%), Positives = 19/25 (76%) Frame = +2 Query: 239 TTGLSWAVLRRYGNINPLSIDYACR 313 +T WA + YGNINPLSIDYACR Sbjct: 95 STASPWAHMLGYGNINPLSIDYACR 119 >emb|CNJ48920.1| Uncharacterised protein [Mycobacterium tuberculosis] Length = 189 Score = 73.9 bits (180), Expect = 4e-11 Identities = 44/95 (46%), Positives = 52/95 (54%), Gaps = 4/95 (4%) Frame = +2 Query: 41 PQTAMRHVSA*WRPDLPGHRPTRLHQYNHSLAELPSCVTPSLGYYQAGSRAPLFGPRRD- 217 P+T HVS L PTRL NH +A LPSCVTP + + + R P + Sbjct: 83 PKTGSHHVSGTQPAHLTTDNPTRLDHDNHRVAWLPSCVTP-VNTFTSKDRVPQPTQHTNK 141 Query: 218 ---LQVRAVSTTGLSWAVLRRYGNINPLSIDYACR 313 + +R VS T WAV RYGNINPLSIDYACR Sbjct: 142 SLHIMLRMVSITISVWAVFHRYGNINPLSIDYACR 176 >gb|EID19495.1| hypothetical protein HMPREF1043_0707 [Streptococcus anginosus subsp. whileyi CCUG 39159] Length = 191 Score = 62.4 bits (150), Expect(2) = 2e-10 Identities = 37/67 (55%), Positives = 41/67 (61%), Gaps = 4/67 (5%) Frame = +2 Query: 125 HSLAELPSCVTP--SLGYYQAGSRAPLFGPRRDL--QVRAVSTTGLSWAVLRRYGNINPL 292 H A LPSCVTP +L R+P P + VRAVS TG +W VL YGNINPL Sbjct: 112 HCPARLPSCVTPVNALASPVQVPRSPSPTPSKTRFGMVRAVSITGSTWTVLHWYGNINPL 171 Query: 293 SIDYACR 313 SIDYACR Sbjct: 172 SIDYACR 178 Score = 29.3 bits (64), Expect(2) = 2e-10 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = +1 Query: 4 EAFLGSMGSLCFASNGYASRLSLMAPGFAWTPAYTLAP 117 +AFLGS+GS G S L A GF + YTL P Sbjct: 71 DAFLGSIGSPDHPPCGRPSGLRHTAGGFTYRQPYTLRP 108 >gb|KPM07194.1| hypothetical protein QR98_0056810 [Sarcoptes scabiei] Length = 96 Score = 44.3 bits (103), Expect(2) = 4e-07 Identities = 20/35 (57%), Positives = 22/35 (62%) Frame = +2 Query: 209 RRDLQVRAVSTTGLSWAVLRRYGNINPLSIDYACR 313 R+ R VS T W+ YGNINPLSIDYACR Sbjct: 49 RKQQHTRVVSITDSPWSHTHGYGNINPLSIDYACR 83 Score = 36.6 bits (83), Expect(2) = 4e-07 Identities = 15/28 (53%), Positives = 16/28 (57%) Frame = +3 Query: 105 HACTSTTTHWRSYPPASPHRLATTRQGP 188 H T + W Y PASPH LATT GP Sbjct: 11 HTLTPQSNKWLGYLPASPHHLATTSSGP 38 >dbj|BAC18353.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 261 Score = 57.4 bits (137), Expect = 4e-06 Identities = 33/60 (55%), Positives = 35/60 (58%), Gaps = 2/60 (3%) Frame = +2 Query: 140 LPSCVTPSLGYYQAGSRAPLFGPR--RDLQVRAVSTTGLSWAVLRRYGNINPLSIDYACR 313 LP CVTPSL YYQ S A R + + VS T WA YGNINPLSIDYACR Sbjct: 189 LPHCVTPSLSYYQIRSHARHHHQPEGRHVILWVVSITDSPWARTLGYGNINPLSIDYACR 248