BLASTX nr result

ID: Cornus23_contig00039641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00039641
         (450 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005648018.1| hypothetical protein COCSUDRAFT_65934 [Cocco...   107   5e-21

>ref|XP_005648018.1| hypothetical protein COCSUDRAFT_65934 [Coccomyxa subellipsoidea
           C-169] gi|384249994|gb|EIE23474.1| hypothetical protein
           COCSUDRAFT_65934 [Coccomyxa subellipsoidea C-169]
          Length = 298

 Score =  107 bits (266), Expect = 5e-21
 Identities = 61/142 (42%), Positives = 86/142 (60%), Gaps = 3/142 (2%)
 Frame = -1

Query: 450 LDSRNTLWGSYTLNDTSNVANSTFNTIKEREGXXXXXXXXXXXXSAVKYTLEKDGYKVEP 271
           LD R TLWG++T +D S ++NST+  ++ER+G            SA + TLEKDGY +EP
Sbjct: 159 LDHRATLWGTHTFHDESLLSNSTYVNLRERQGFIIHPFTVPISTSAAQLTLEKDGYVIEP 218

Query: 270 AFDIATRSPFLSVEKFLSDKNVLAKASYAFRDEVAMLEFGYRPDE--KDFPLARTYVKGP 97
           AFD   R+ +LSV K  +  N+  + SYAF++E A+ E GYR +      PL R YVK P
Sbjct: 219 AFDFKQRAGYLSVAKDHNKYNL--RGSYAFKEETALFEVGYRHNGVFDRNPLVRGYVKAP 276

Query: 96  L-GQGGVGPISAGFILDKTIEL 34
           +    G+G +S G I+D T E+
Sbjct: 277 ISANNGLGALSLGVIVDHTFEI 298


Top