BLASTX nr result

ID: Cornus23_contig00039616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00039616
         (382 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593907.1| DUF1365 family protein [Medicago truncatula]...    58   3e-06
ref|XP_002277705.1| PREDICTED: uncharacterized protein LOC100254...    57   5e-06

>ref|XP_003593907.1| DUF1365 family protein [Medicago truncatula]
           gi|355482955|gb|AES64158.1| DUF1365 family protein
           [Medicago truncatula]
          Length = 311

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 15/77 (19%)
 Frame = -3

Query: 278 LRRLFTPQAAAPSAADGTKPASLYQDIICYE*RRPVHHSF----RYALID---------- 141
           LRRL + +AA+ S+ DG +P SLY+  + ++ R PVHHSF    RYALID          
Sbjct: 30  LRRLVSSRAASSSSNDGDEPVSLYEGTVYHQRRHPVHHSFQYNVRYALIDLDRALHAPPN 89

Query: 140 -LSADEARCVAKTTVPI 93
            LS DEAR +  T  PI
Sbjct: 90  HLSPDEARQITDTNGPI 106


>ref|XP_002277705.1| PREDICTED: uncharacterized protein LOC100254825 [Vitis vinifera]
           gi|731405147|ref|XP_010655678.1| PREDICTED:
           uncharacterized protein LOC100254825 [Vitis vinifera]
           gi|147866339|emb|CAN79921.1| hypothetical protein
           VITISV_002110 [Vitis vinifera]
           gi|297740736|emb|CBI30918.3| unnamed protein product
           [Vitis vinifera]
          Length = 318

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 15/77 (19%)
 Frame = -3

Query: 278 LRRLFTPQAAAPSAADGTKPASLYQDIICYE*RRPVHHSF----RYALID---------- 141
           LR L + ++   SAA G  P SLY+  + +E RRPVHHSF    RYAL+D          
Sbjct: 30  LRCLCSSRSVGSSAATGEDPVSLYEGTVWHERRRPVHHSFRYAVRYALVDIDSAPNVLPD 89

Query: 140 -LSADEARCVAKTTVPI 93
            LS DEAR +A TT P+
Sbjct: 90  HLSGDEARRIAGTTGPV 106


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