BLASTX nr result
ID: Cornus23_contig00039425
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00039425
(376 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004339676.1| elongation factor SIII p15 subunit, putative... 134 3e-29
gb|KND00445.1| hypothetical protein SPPG_09221 [Spizellomyces pu... 98 2e-18
ref|XP_002948468.1| hypothetical protein VOLCADRAFT_73804 [Volvo... 97 4e-18
ref|XP_001700238.1| predicted protein [Chlamydomonas reinhardtii... 97 4e-18
ref|XP_006680604.1| hypothetical protein BATDEDRAFT_7508, partia... 95 2e-17
emb|CBJ30221.1| RNA polymerase II transcription elongation facto... 95 2e-17
gb|ELU04459.1| hypothetical protein CAPTEDRAFT_162548 [Capitella... 94 3e-17
ref|XP_003283742.1| hypothetical protein DICPUDRAFT_85955 [Dicty... 94 3e-17
gb|KNE66334.1| hypothetical protein AMAG_10556 [Allomyces macrog... 94 4e-17
gb|KHN75340.1| Transcription elongation factor B polypeptide 1 [... 94 4e-17
ref|XP_638640.1| hypothetical protein DDB_G0284201 [Dictyosteliu... 94 4e-17
ref|XP_010905395.1| PREDICTED: transcription elongation factor B... 94 5e-17
ref|XP_010923200.1| PREDICTED: transcription elongation factor B... 94 5e-17
ref|XP_008811505.1| PREDICTED: transcription elongation factor B... 94 5e-17
gb|KMZ72507.1| putative Transcription elongation factor B polype... 93 7e-17
ref|XP_005794132.1| hypothetical protein EMIHUDRAFT_425739 [Emil... 93 7e-17
ref|XP_013785772.1| PREDICTED: transcription elongation factor B... 93 9e-17
ref|XP_009038876.1| hypothetical protein AURANDRAFT_29207, parti... 93 9e-17
gb|KNE57606.1| hypothetical protein AMAG_03296 [Allomyces macrog... 92 1e-16
gb|KFB40610.1| AGAP011535-PA-like protein [Anopheles sinensis] 92 1e-16
>ref|XP_004339676.1| elongation factor SIII p15 subunit, putative [Acanthamoeba
castellanii str. Neff] gi|440796554|gb|ELR17663.1|
elongation factor SIII p15 subunit, putative
[Acanthamoeba castellanii str. Neff]
Length = 103
Score = 134 bits (336), Expect = 3e-29
Identities = 64/75 (85%), Positives = 71/75 (94%)
Frame = -1
Query: 361 EGEVDTVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEK 182
+GE+DTVKLI+ADGHEF+VDRK AMVSGTIKSMLSGPGTFTEQ GEI FREISTPILEK
Sbjct: 4 DGELDTVKLISADGHEFVVDRKAAMVSGTIKSMLSGPGTFTEQAMGEINFREISTPILEK 63
Query: 181 VIQYFYYRVKYTNST 137
VIQYFYY+++YTNST
Sbjct: 64 VIQYFYYKLRYTNST 78
>gb|KND00445.1| hypothetical protein SPPG_09221 [Spizellomyces punctatus DAOM
BR117]
Length = 108
Score = 98.2 bits (243), Expect = 2e-18
Identities = 44/71 (61%), Positives = 56/71 (78%)
Frame = -1
Query: 349 DTVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQY 170
+TVKL+++DG EF++DRKCAM SGTIK+MLS PG FTE + FR+I ILEKV +Y
Sbjct: 13 ETVKLVSSDGFEFVIDRKCAMASGTIKNMLSSPGQFTESVQNTVNFRDIKAVILEKVCKY 72
Query: 169 FYYRVKYTNST 137
YY+V+YTNST
Sbjct: 73 LYYKVRYTNST 83
>ref|XP_002948468.1| hypothetical protein VOLCADRAFT_73804 [Volvox carteri f.
nagariensis] gi|300266155|gb|EFJ50343.1| hypothetical
protein VOLCADRAFT_73804 [Volvox carteri f. nagariensis]
Length = 100
Score = 97.4 bits (241), Expect = 4e-18
Identities = 46/70 (65%), Positives = 58/70 (82%)
Frame = -1
Query: 346 TVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQYF 167
TVKL++A+G+EFIVD K A VS TI++MLS G+FTE + GE+ F EISTPILEKV QYF
Sbjct: 5 TVKLVSAEGYEFIVDYKAACVSNTIRNMLSSQGSFTETELGEVKFPEISTPILEKVCQYF 64
Query: 166 YYRVKYTNST 137
YY+++Y NST
Sbjct: 65 YYKLRYQNST 74
>ref|XP_001700238.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272554|gb|EDO98353.1| predicted protein
[Chlamydomonas reinhardtii]
Length = 100
Score = 97.4 bits (241), Expect = 4e-18
Identities = 46/70 (65%), Positives = 58/70 (82%)
Frame = -1
Query: 346 TVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQYF 167
TVKL++A+G+EFIVD K A VS TI++MLS G+FTE + GE+ F EISTPILEKV QYF
Sbjct: 5 TVKLVSAEGYEFIVDYKAACVSNTIRNMLSSQGSFTETELGEVKFPEISTPILEKVCQYF 64
Query: 166 YYRVKYTNST 137
YY+++Y NST
Sbjct: 65 YYKLRYQNST 74
>ref|XP_006680604.1| hypothetical protein BATDEDRAFT_7508, partial [Batrachochytrium
dendrobatidis JAM81] gi|328768445|gb|EGF78491.1|
hypothetical protein BATDEDRAFT_7508, partial
[Batrachochytrium dendrobatidis JAM81]
Length = 95
Score = 94.7 bits (234), Expect = 2e-17
Identities = 45/70 (64%), Positives = 54/70 (77%)
Frame = -1
Query: 349 DTVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQY 170
+TVKL++ADG EF++DRK AM SGTIKSMLS PG FTE EI FR+I ILEKV +Y
Sbjct: 1 ETVKLVSADGFEFVLDRKYAMASGTIKSMLSSPGMFTESLQNEIQFRDIKAVILEKVCRY 60
Query: 169 FYYRVKYTNS 140
YY+V+Y NS
Sbjct: 61 LYYKVRYANS 70
>emb|CBJ30221.1| RNA polymerase II transcription elongation factor Elongin/SIII,
subunit elongin C [Ectocarpus siliculosus]
Length = 100
Score = 94.7 bits (234), Expect = 2e-17
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = -1
Query: 367 MTEGEVDTVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPIL 188
M + + VKL++A+G EF VDRKCAMVSGTIK+MLSG F E SG++ F EISTPIL
Sbjct: 1 MATEDQEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGG--FGEAASGQVHFAEISTPIL 58
Query: 187 EKVIQYFYYRVKYTNS 140
EKVIQ+ YY+V+YTNS
Sbjct: 59 EKVIQFVYYKVRYTNS 74
>gb|ELU04459.1| hypothetical protein CAPTEDRAFT_162548 [Capitella teleta]
Length = 120
Score = 94.4 bits (233), Expect = 3e-17
Identities = 43/69 (62%), Positives = 58/69 (84%)
Frame = -1
Query: 343 VKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQYFY 164
VKLI++DGHEFIV R+ A+ SGTIK+MLSGPG F+E ++ EI+FREI + +L+KV YF
Sbjct: 27 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFSENETNEIIFREIPSHVLQKVCMYFT 86
Query: 163 YRVKYTNST 137
Y+V+YTNS+
Sbjct: 87 YKVRYTNSS 95
>ref|XP_003283742.1| hypothetical protein DICPUDRAFT_85955 [Dictyostelium purpureum]
gi|325086365|gb|EGC39756.1| hypothetical protein
DICPUDRAFT_85955 [Dictyostelium purpureum]
Length = 109
Score = 94.4 bits (233), Expect = 3e-17
Identities = 46/72 (63%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Frame = -1
Query: 349 DTVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGT-FTEQQSGEIVFREISTPILEKVIQ 173
D ++L ++ GHEF++ RK + VSGTIKSMLSG + F E Q+ EI FREISTP+LEKVIQ
Sbjct: 13 DVLRLYSSSGHEFVLSRKMSYVSGTIKSMLSGDNSNFMEDQNNEIRFREISTPVLEKVIQ 72
Query: 172 YFYYRVKYTNST 137
YFY++ KYTNST
Sbjct: 73 YFYFKHKYTNST 84
>gb|KNE66334.1| hypothetical protein AMAG_10556 [Allomyces macrogynus ATCC 38327]
Length = 120
Score = 94.0 bits (232), Expect = 4e-17
Identities = 42/71 (59%), Positives = 54/71 (76%)
Frame = -1
Query: 349 DTVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQY 170
D V+L++ADG EF++DRKCAM SGTIK+MLS P F E Q + F++I ILEKV QY
Sbjct: 24 DHVRLVSADGFEFVIDRKCAMASGTIKAMLSSPARFAESQHNVVEFKDIKAVILEKVCQY 83
Query: 169 FYYRVKYTNST 137
YY+V+YTNS+
Sbjct: 84 LYYKVRYTNSS 94
>gb|KHN75340.1| Transcription elongation factor B polypeptide 1 [Toxocara canis]
Length = 111
Score = 94.0 bits (232), Expect = 4e-17
Identities = 42/69 (60%), Positives = 57/69 (82%)
Frame = -1
Query: 343 VKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQYFY 164
VKLI++DGHEFI+ + A+ SGTIK+MLSGPGT+ E +S E+ FREI + +L+KV QYF
Sbjct: 18 VKLISSDGHEFIIKKDLALTSGTIKAMLSGPGTYAENESNEVNFREIPSHVLQKVCQYFA 77
Query: 163 YRVKYTNST 137
Y+V+YTNS+
Sbjct: 78 YKVRYTNSS 86
>ref|XP_638640.1| hypothetical protein DDB_G0284201 [Dictyostelium discoideum AX4]
gi|74854345|sp|Q54Q05.1|ELOC_DICDI RecName:
Full=Transcription elongation factor B polypeptide 1;
AltName: Full=Elongin-C; AltName: Full=RNA polymerase II
transcription factor SIII subunit C
gi|60467256|gb|EAL65289.1| hypothetical protein
DDB_G0284201 [Dictyostelium discoideum AX4]
Length = 109
Score = 94.0 bits (232), Expect = 4e-17
Identities = 46/72 (63%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Frame = -1
Query: 349 DTVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGT-FTEQQSGEIVFREISTPILEKVIQ 173
D ++L ++ GHEF++ RK + VSGTIKSMLSG + F E Q+ EI FREISTP+LEKVIQ
Sbjct: 13 DVLRLYSSTGHEFVLSRKMSYVSGTIKSMLSGDNSNFMEDQNNEIRFREISTPVLEKVIQ 72
Query: 172 YFYYRVKYTNST 137
YFY++ KYTNST
Sbjct: 73 YFYFKNKYTNST 84
>ref|XP_010905395.1| PREDICTED: transcription elongation factor B polypeptide 1-like
[Elaeis guineensis]
Length = 98
Score = 93.6 bits (231), Expect = 5e-17
Identities = 42/69 (60%), Positives = 57/69 (82%)
Frame = -1
Query: 349 DTVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQY 170
+TVKLI+A+G EF++D+K AMVS TI++ML+ PG F E Q GE+ F EISTPILEK+ QY
Sbjct: 5 ETVKLISAEGFEFVIDKKAAMVSHTIRNMLTSPGGFAETQLGEVTFPEISTPILEKICQY 64
Query: 169 FYYRVKYTN 143
FY+ ++YT+
Sbjct: 65 FYWSLQYTS 73
>ref|XP_010923200.1| PREDICTED: transcription elongation factor B polypeptide 1 [Elaeis
guineensis]
Length = 98
Score = 93.6 bits (231), Expect = 5e-17
Identities = 43/69 (62%), Positives = 56/69 (81%)
Frame = -1
Query: 349 DTVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQY 170
DTVKLI+A+G EF++D+K AMVS TI++ML+ PG F E Q GE+ F EISTPILEKV QY
Sbjct: 5 DTVKLISAEGFEFVIDKKAAMVSHTIRNMLTSPGGFAETQLGEVTFPEISTPILEKVCQY 64
Query: 169 FYYRVKYTN 143
FY+ ++Y +
Sbjct: 65 FYWSLQYAS 73
>ref|XP_008811505.1| PREDICTED: transcription elongation factor B polypeptide 1-like
[Phoenix dactylifera]
Length = 97
Score = 93.6 bits (231), Expect = 5e-17
Identities = 42/69 (60%), Positives = 57/69 (82%)
Frame = -1
Query: 349 DTVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQY 170
+TVKLI+A+G EF++D+K AMVS TI++ML+ PG F E Q GE+ F EISTPILEK+ QY
Sbjct: 4 ETVKLISAEGFEFVIDKKAAMVSHTIRNMLTSPGGFAETQLGEVTFPEISTPILEKICQY 63
Query: 169 FYYRVKYTN 143
FY+ ++YT+
Sbjct: 64 FYWSLQYTS 72
>gb|KMZ72507.1| putative Transcription elongation factor B polypeptide [Zostera
marina]
Length = 98
Score = 93.2 bits (230), Expect = 7e-17
Identities = 42/69 (60%), Positives = 57/69 (82%)
Frame = -1
Query: 349 DTVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQY 170
DTVKLI+A+G EF++DRK AMVS TI++ML+ PG F+E Q GE+ F EISTPILEK+ QY
Sbjct: 5 DTVKLISAEGFEFVIDRKAAMVSNTIRNMLTSPGGFSEAQHGEVRFPEISTPILEKICQY 64
Query: 169 FYYRVKYTN 143
FY+ +++ +
Sbjct: 65 FYWSLQFAS 73
>ref|XP_005794132.1| hypothetical protein EMIHUDRAFT_425739 [Emiliania huxleyi CCMP1516]
gi|485648797|gb|EOD41703.1| hypothetical protein
EMIHUDRAFT_425739 [Emiliania huxleyi CCMP1516]
Length = 99
Score = 93.2 bits (230), Expect = 7e-17
Identities = 44/70 (62%), Positives = 56/70 (80%)
Frame = -1
Query: 352 VDTVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQ 173
+D VKLIA+DG E I+DR+ AMVSGTIKSML GPG + EQ+ GEI F EIS LE+ +Q
Sbjct: 1 MDPVKLIASDGTEIILDRQAAMVSGTIKSMLGGPGGYVEQEKGEINFPEISGKTLEQTVQ 60
Query: 172 YFYYRVKYTN 143
YFYY++++TN
Sbjct: 61 YFYYKLRHTN 70
>ref|XP_013785772.1| PREDICTED: transcription elongation factor B polypeptide 1 [Limulus
polyphemus]
Length = 116
Score = 92.8 bits (229), Expect = 9e-17
Identities = 42/69 (60%), Positives = 57/69 (82%)
Frame = -1
Query: 343 VKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQYFY 164
VKLI++DGHEFI+ R+ A+ SGTIK+MLSGPG F E ++ E+ FREI + +L+KV QYF
Sbjct: 23 VKLISSDGHEFIIKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLQKVCQYFT 82
Query: 163 YRVKYTNST 137
Y+V+YTNS+
Sbjct: 83 YKVRYTNSS 91
>ref|XP_009038876.1| hypothetical protein AURANDRAFT_29207, partial [Aureococcus
anophagefferens] gi|323450415|gb|EGB06296.1|
hypothetical protein AURANDRAFT_29207, partial
[Aureococcus anophagefferens]
Length = 92
Score = 92.8 bits (229), Expect = 9e-17
Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 3/67 (4%)
Frame = -1
Query: 331 AADGHEFIVDRKCAMVSGTIKSMLSGPG---TFTEQQSGEIVFREISTPILEKVIQYFYY 161
+A+GHEF VDRKCA SGTIK+MLSGP FTE SGEI F EISTPILEKVIQYFYY
Sbjct: 1 SAEGHEFWVDRKCANTSGTIKAMLSGPRGPRQFTES-SGEIKFPEISTPILEKVIQYFYY 59
Query: 160 RVKYTNS 140
+++YTNS
Sbjct: 60 KLRYTNS 66
>gb|KNE57606.1| hypothetical protein AMAG_03296 [Allomyces macrogynus ATCC 38327]
Length = 120
Score = 92.4 bits (228), Expect = 1e-16
Identities = 41/71 (57%), Positives = 54/71 (76%)
Frame = -1
Query: 349 DTVKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQY 170
D V+L++ADG EF++DRKCAM SGTIK+MLS P F E Q + F++I ILEKV QY
Sbjct: 24 DHVRLVSADGFEFVIDRKCAMASGTIKAMLSSPARFAESQHNVVEFKDIKAVILEKVCQY 83
Query: 169 FYYRVKYTNST 137
YY+V++TNS+
Sbjct: 84 LYYKVRFTNSS 94
>gb|KFB40610.1| AGAP011535-PA-like protein [Anopheles sinensis]
Length = 115
Score = 92.4 bits (228), Expect = 1e-16
Identities = 43/69 (62%), Positives = 56/69 (81%)
Frame = -1
Query: 343 VKLIAADGHEFIVDRKCAMVSGTIKSMLSGPGTFTEQQSGEIVFREISTPILEKVIQYFY 164
VKLI++DGHEFIV R+ A+ SGTIK+MLSGPG F E ++ E+ FREI + +LEKV YF
Sbjct: 22 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENEANEVNFREIPSHVLEKVCMYFT 81
Query: 163 YRVKYTNST 137
Y+V+YTNS+
Sbjct: 82 YKVRYTNSS 90