BLASTX nr result
ID: Cornus23_contig00039340
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00039340
(603 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008240562.1| PREDICTED: pentatricopeptide repeat-containi... 91 4e-16
ref|XP_009368106.1| PREDICTED: pentatricopeptide repeat-containi... 91 6e-16
ref|XP_008387316.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-15
gb|KDO50719.1| hypothetical protein CISIN_1g005265mg [Citrus sin... 89 2e-15
ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citr... 89 2e-15
ref|XP_002517667.1| pentatricopeptide repeat-containing protein,... 88 4e-15
ref|XP_011466821.1| PREDICTED: pentatricopeptide repeat-containi... 87 7e-15
ref|XP_011466820.1| PREDICTED: pentatricopeptide repeat-containi... 87 7e-15
ref|XP_010270447.1| PREDICTED: uncharacterized protein LOC104606... 87 9e-15
ref|XP_008359551.1| PREDICTED: pentatricopeptide repeat-containi... 87 9e-15
ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containi... 85 3e-14
ref|XP_003602631.1| PPR containing plant-like protein [Medicago ... 84 6e-14
gb|KOM41056.1| hypothetical protein LR48_Vigan04g125400 [Vigna a... 83 1e-13
ref|XP_007137795.1| hypothetical protein PHAVU_009G156000g [Phas... 83 1e-13
emb|CDP04658.1| unnamed protein product [Coffea canephora] 83 1e-13
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi... 81 4e-13
ref|XP_012073146.1| PREDICTED: pentatricopeptide repeat-containi... 80 8e-13
ref|XP_014492252.1| PREDICTED: pentatricopeptide repeat-containi... 79 2e-12
gb|KRH29681.1| hypothetical protein GLYMA_11G131400 [Glycine max] 77 5e-12
gb|KHN21887.1| Pentatricopeptide repeat-containing protein [Glyc... 77 5e-12
>ref|XP_008240562.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Prunus mume]
Length = 706
Score = 91.3 bits (225), Expect = 4e-16
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +2
Query: 425 RYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRLI 601
R+ LF+Q+VGDLS L+S+P AKLLD+C+R+KSARD RIHARVIK+QF SEIFIQNRLI
Sbjct: 4 RHGLFKQLVGDLSFLDSTPFAKLLDSCIRTKSARDAHRIHARVIKTQFSSEIFIQNRLI 62
>ref|XP_009368106.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Pyrus x bretschneideri]
gi|694384428|ref|XP_009368107.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g13600
[Pyrus x bretschneideri]
Length = 706
Score = 90.5 bits (223), Expect = 6e-16
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +2
Query: 425 RYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRLI 601
R+ LF+Q VGDLS L+S+P KLLD+C+R+KSARD RRIHAR+IK+QF SEIFIQNRLI
Sbjct: 4 RHGLFKQFVGDLSFLDSTPFGKLLDSCIRTKSARDARRIHARIIKTQFSSEIFIQNRLI 62
>ref|XP_008387316.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Malus domestica]
Length = 706
Score = 88.6 bits (218), Expect = 2e-15
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +2
Query: 425 RYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRLI 601
R+ LF+Q VGDLS L+S+P KLLD+C+R+KSARD RRIHAR+IK+QF EIFIQNRLI
Sbjct: 4 RHGLFKQFVGDLSFLDSTPFGKLLDSCIRTKSARDARRIHARIIKTQFSXEIFIQNRLI 62
>gb|KDO50719.1| hypothetical protein CISIN_1g005265mg [Citrus sinensis]
Length = 705
Score = 88.6 bits (218), Expect = 2e-15
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +2
Query: 440 RQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRLI 601
+Q+VGDL+ L+SSP AKLLD+CLRSKS DTRR+HAR+IKSQF SEIFIQNRLI
Sbjct: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLI 61
>ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citrus clementina]
gi|568821173|ref|XP_006465064.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g13600-like [Citrus sinensis]
gi|557534290|gb|ESR45408.1| hypothetical protein
CICLE_v10000448mg [Citrus clementina]
Length = 705
Score = 88.6 bits (218), Expect = 2e-15
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +2
Query: 440 RQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRLI 601
+Q+VGDL+ L+SSP AKLLD+CLRSKS DTRR+HAR+IKSQF SEIFIQNRLI
Sbjct: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLI 61
>ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543299|gb|EEF44831.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 628
Score = 87.8 bits (216), Expect = 4e-15
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = +2
Query: 419 MKRYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRL 598
M ++ +++VGDLS L+SSP AKLLD+CL+SKS RDTRRIHAR+IK+QF E+FIQNRL
Sbjct: 1 MSKHGFVKKIVGDLSFLDSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRL 60
Query: 599 I 601
I
Sbjct: 61 I 61
>ref|XP_011466821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
isoform X2 [Fragaria vesca subsp. vesca]
Length = 708
Score = 87.0 bits (214), Expect = 7e-15
Identities = 39/55 (70%), Positives = 50/55 (90%)
Frame = +2
Query: 437 FRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRLI 601
F+QVVGDLS ++SSP AKLLD+C+R+KSARD RR+HAR+IK+QF SE+F+ NRLI
Sbjct: 6 FKQVVGDLSFIDSSPFAKLLDSCIRAKSARDARRVHARLIKTQFSSEVFVHNRLI 60
>ref|XP_011466820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
isoform X1 [Fragaria vesca subsp. vesca]
Length = 735
Score = 87.0 bits (214), Expect = 7e-15
Identities = 39/55 (70%), Positives = 50/55 (90%)
Frame = +2
Query: 437 FRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRLI 601
F+QVVGDLS ++SSP AKLLD+C+R+KSARD RR+HAR+IK+QF SE+F+ NRLI
Sbjct: 6 FKQVVGDLSFIDSSPFAKLLDSCIRAKSARDARRVHARLIKTQFSSEVFVHNRLI 60
>ref|XP_010270447.1| PREDICTED: uncharacterized protein LOC104606779 [Nelumbo nucifera]
Length = 1399
Score = 86.7 bits (213), Expect = 9e-15
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = +2
Query: 416 GMKRYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNR 595
GM RY FR +VGDLSL NS+ AKLLD C++SKS RD RR+HARV+K++F SEIFIQNR
Sbjct: 692 GMARYGSFRHLVGDLSLPNSTTFAKLLDLCIQSKSLRDGRRVHARVMKTRFASEIFIQNR 751
Query: 596 LI 601
LI
Sbjct: 752 LI 753
>ref|XP_008359551.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Malus domestica]
Length = 713
Score = 86.7 bits (213), Expect = 9e-15
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = +2
Query: 398 VLC*DYGMKRYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSE 577
+LC + R+ LF+Q VGDLS L+S+P KLLD+C+R+K ARD RRIHAR+IK+Q SE
Sbjct: 2 LLCYNGMGTRHGLFKQFVGDLSFLDSTPFGKLLDSCIRTKXARDARRIHARIIKTQISSE 61
Query: 578 IFIQNRLI 601
IFIQNRLI
Sbjct: 62 IFIQNRLI 69
>ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Cicer arietinum]
Length = 706
Score = 85.1 bits (209), Expect = 3e-14
Identities = 41/61 (67%), Positives = 51/61 (83%)
Frame = +2
Query: 419 MKRYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRL 598
M ++ L R+VVGDLS L+SSP AKLLD C+RSKS + RR+HAR+IK+QF SEIFIQNRL
Sbjct: 1 MGKHGLVRKVVGDLSFLDSSPFAKLLDCCVRSKSVFEARRVHARIIKTQFSSEIFIQNRL 60
Query: 599 I 601
+
Sbjct: 61 V 61
>ref|XP_003602631.1| PPR containing plant-like protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| PPR containing plant-like
protein [Medicago truncatula]
Length = 705
Score = 84.0 bits (206), Expect = 6e-14
Identities = 40/61 (65%), Positives = 51/61 (83%)
Frame = +2
Query: 419 MKRYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRL 598
M ++ L R+VVGDLS L+SSP AKLLDTC++SKS + R +HAR+IK+QF SEIFIQNRL
Sbjct: 1 MAKHGLVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRL 60
Query: 599 I 601
+
Sbjct: 61 V 61
>gb|KOM41056.1| hypothetical protein LR48_Vigan04g125400 [Vigna angularis]
Length = 705
Score = 83.2 bits (204), Expect = 1e-13
Identities = 40/61 (65%), Positives = 50/61 (81%)
Frame = +2
Query: 419 MKRYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRL 598
M R+ ++VVGDL LL+SSP A+LLD+C+RSKS D RRIH R+IK+QF SEIFIQNRL
Sbjct: 1 MGRHAFVQKVVGDLCLLDSSPFARLLDSCVRSKSGIDVRRIHGRIIKTQFSSEIFIQNRL 60
Query: 599 I 601
+
Sbjct: 61 V 61
>ref|XP_007137795.1| hypothetical protein PHAVU_009G156000g [Phaseolus vulgaris]
gi|561010882|gb|ESW09789.1| hypothetical protein
PHAVU_009G156000g [Phaseolus vulgaris]
Length = 705
Score = 83.2 bits (204), Expect = 1e-13
Identities = 40/61 (65%), Positives = 50/61 (81%)
Frame = +2
Query: 419 MKRYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRL 598
M R+ + ++VVGDL L+SSP AKLLD+C+RSKS D RRIH R+IK+QF SEIFIQNRL
Sbjct: 1 MGRHGVVQKVVGDLCFLDSSPFAKLLDSCIRSKSGIDARRIHCRIIKAQFSSEIFIQNRL 60
Query: 599 I 601
+
Sbjct: 61 V 61
>emb|CDP04658.1| unnamed protein product [Coffea canephora]
Length = 704
Score = 82.8 bits (203), Expect = 1e-13
Identities = 40/61 (65%), Positives = 48/61 (78%)
Frame = +2
Query: 419 MKRYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRL 598
M R FRQV+ DLSL NSSP AKLLD+C++SKSARD +HAR++KSQF E+FI NRL
Sbjct: 1 MARNVFFRQVIADLSLPNSSPFAKLLDSCIKSKSARDVVGVHARILKSQFSHEVFINNRL 60
Query: 599 I 601
I
Sbjct: 61 I 61
>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max] gi|947075842|gb|KRH24682.1|
hypothetical protein GLYMA_12G055700 [Glycine max]
Length = 705
Score = 81.3 bits (199), Expect = 4e-13
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +2
Query: 419 MKRYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRL 598
M R+ +++VG+L L+SSP AKLLD+C+RSKS D RRIHAR+IK+QF SEIFIQNRL
Sbjct: 1 MGRHGFVQKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRL 60
Query: 599 I 601
+
Sbjct: 61 V 61
>ref|XP_012073146.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Jatropha curcas]
Length = 707
Score = 80.1 bits (196), Expect = 8e-13
Identities = 37/54 (68%), Positives = 48/54 (88%)
Frame = +2
Query: 440 RQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRLI 601
+Q +GDLS L+SS AKLLD+C++S+SA DTRRIHAR+IK+QF +E+FIQNRLI
Sbjct: 10 KQAIGDLSFLDSSHFAKLLDSCVKSQSASDTRRIHARIIKTQFATEVFIQNRLI 63
>ref|XP_014492252.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vigna radiata var. radiata]
Length = 705
Score = 78.6 bits (192), Expect = 2e-12
Identities = 38/61 (62%), Positives = 48/61 (78%)
Frame = +2
Query: 419 MKRYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRL 598
M R+ ++VVGDL L+SS A+LLD+C+RSKS D RRIH R+IK+QF SEIFIQNRL
Sbjct: 1 MGRHAFVQKVVGDLCFLDSSSFARLLDSCVRSKSGIDVRRIHGRIIKTQFSSEIFIQNRL 60
Query: 599 I 601
+
Sbjct: 61 V 61
>gb|KRH29681.1| hypothetical protein GLYMA_11G131400 [Glycine max]
Length = 652
Score = 77.4 bits (189), Expect = 5e-12
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = +2
Query: 419 MKRYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRL 598
M R ++VVGDL L+SSP AKLLD+C+RSKS D RRIHAR+ K+QF EIFIQNRL
Sbjct: 1 MGRNGFVQKVVGDLCFLDSSPFAKLLDSCVRSKSEIDARRIHARISKTQFSYEIFIQNRL 60
Query: 599 I 601
+
Sbjct: 61 V 61
>gb|KHN21887.1| Pentatricopeptide repeat-containing protein [Glycine soja]
Length = 639
Score = 77.4 bits (189), Expect = 5e-12
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = +2
Query: 419 MKRYELFRQVVGDLSLLNSSPLAKLLDTCLRSKSARDTRRIHARVIKSQFFSEIFIQNRL 598
M R ++VVGDL L+SSP AKLLD+C+RSKS D RRIHAR+ K+QF EIFIQNRL
Sbjct: 1 MGRNGFVQKVVGDLCFLDSSPFAKLLDSCVRSKSEIDARRIHARISKTQFSYEIFIQNRL 60
Query: 599 I 601
+
Sbjct: 61 V 61