BLASTX nr result
ID: Cornus23_contig00039127
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00039127
(325 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADD30914.1| putative RF1 protein (chloroplast) [Cornus florida] 206 5e-51
gb|AEK71694.1| hypothetical chloroplast RF1 [Cornus florida] 206 5e-51
gb|ADD30919.1| putative RF1 protein (chloroplast) [Liquidambar s... 194 2e-47
ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) ... 194 2e-47
gb|ADD30908.1| putative RF1 protein (chloroplast) [Meliosma aff.... 188 2e-45
gb|AEK71643.1| hypothetical chloroplast RF1, partial (plastid) [... 188 2e-45
gb|ADD30903.1| putative RF1 protein (chloroplast) [Aucuba japonica] 186 6e-45
gb|ADD30913.1| putative RF1 protein (chloroplast) [Berberidopsis... 182 6e-44
gb|AEK71706.1| hypothetical chloroplast RF1 [Berberidopsis coral... 182 6e-44
gb|ALB78336.1| hypothetical chloroplast RF1 (chloroplast) [Heuch... 182 8e-44
gb|ADD30918.1| putative RF1 protein (chloroplast) [Heuchera sang... 182 8e-44
gb|AEK71741.1| hypothetical chloroplast RF1 [Heuchera sanguinea] 182 8e-44
ref|YP_009019849.1| hypothetical chloroplast RF1 (chloroplast) [... 180 4e-43
dbj|BAO01719.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 180 4e-43
dbj|BAO01635.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 180 4e-43
dbj|BAO01551.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 180 4e-43
ref|YP_567136.1| hypothetical chloroplast RF1 (chloroplast) [Vit... 180 4e-43
gb|AEK71713.1| hypothetical chloroplast RF1 [Aucuba japonica] 179 7e-43
ref|XP_010655325.1| PREDICTED: LOW QUALITY PROTEIN: putative mem... 178 1e-42
gb|AIP85267.1| Ycf1 (chloroplast) [Camellia sinensis] 177 2e-42
>gb|ADD30914.1| putative RF1 protein (chloroplast) [Cornus florida]
Length = 1867
Score = 206 bits (524), Expect = 5e-51
Identities = 103/108 (95%), Positives = 103/108 (95%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS IL KKLKETSK EERR SAEETDVEIETASETKGTKQEQEESTEEDPSPSLF
Sbjct: 236 YLGRIPSPILTKKLKETSKTEERRESAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT DEFHFHFKETCYQNSPISETSYL
Sbjct: 296 SEEKEDPDKIDETEEIRVNGKEKTTDEFHFHFKETCYQNSPISETSYL 343
>gb|AEK71694.1| hypothetical chloroplast RF1 [Cornus florida]
Length = 356
Score = 206 bits (524), Expect = 5e-51
Identities = 103/108 (95%), Positives = 103/108 (95%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS IL KKLKETSK EERR SAEETDVEIETASETKGTKQEQEESTEEDPSPSLF
Sbjct: 236 YLGRIPSPILTKKLKETSKTEERRESAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT DEFHFHFKETCYQNSPISETSYL
Sbjct: 296 SEEKEDPDKIDETEEIRVNGKEKTTDEFHFHFKETCYQNSPISETSYL 343
>gb|ADD30919.1| putative RF1 protein (chloroplast) [Liquidambar styraciflua]
Length = 1882
Score = 194 bits (494), Expect = 2e-47
Identities = 95/108 (87%), Positives = 100/108 (92%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS I+ KKLKETSK EER S EETDVEIET SETKGTK+EQEESTEEDPSPSLF
Sbjct: 233 YLGRIPSPIVTKKLKETSKTEERGESEEETDVEIETTSETKGTKEEQEESTEEDPSPSLF 292
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT+DEFHFHFKETCY+NSP+ ETSYL
Sbjct: 293 SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVYETSYL 340
>ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) [Liquidambar formosana]
gi|491650429|gb|AGL13489.1| hypothetical chloroplast
RF19 (chloroplast) [Liquidambar formosana]
Length = 1878
Score = 194 bits (494), Expect = 2e-47
Identities = 95/108 (87%), Positives = 100/108 (92%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS I+ KKLKETSK EER S EETDVEIET SETKGTK+EQEESTEEDPSPSLF
Sbjct: 233 YLGRIPSPIVTKKLKETSKTEERGESEEETDVEIETTSETKGTKEEQEESTEEDPSPSLF 292
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT+DEFHFHFKETCY+NSP+ ETSYL
Sbjct: 293 SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPVYETSYL 340
>gb|ADD30908.1| putative RF1 protein (chloroplast) [Meliosma aff. cuneifolia Moore
333]
Length = 1894
Score = 188 bits (477), Expect = 2e-45
Identities = 92/108 (85%), Positives = 97/108 (89%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS I+ KKLKET+K EER S EETDVEIET SETKGTKQEQE STEEDPSPSL+
Sbjct: 233 YLGRIPSPIVTKKLKETAKTEERGESEEETDVEIETTSETKGTKQEQEGSTEEDPSPSLY 292
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT+DEFHFH KETCYQNSP+ E SYL
Sbjct: 293 SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHLKETCYQNSPVYENSYL 340
>gb|AEK71643.1| hypothetical chloroplast RF1, partial (plastid) [Meliosma aff.
cuneifolia Moore 333]
Length = 420
Score = 188 bits (477), Expect = 2e-45
Identities = 92/108 (85%), Positives = 97/108 (89%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS I+ KKLKET+K EER S EETDVEIET SETKGTKQEQE STEEDPSPSL+
Sbjct: 233 YLGRIPSPIVTKKLKETAKTEERGESEEETDVEIETTSETKGTKQEQEGSTEEDPSPSLY 292
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT+DEFHFH KETCYQNSP+ E SYL
Sbjct: 293 SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHLKETCYQNSPVYENSYL 340
>gb|ADD30903.1| putative RF1 protein (chloroplast) [Aucuba japonica]
Length = 1890
Score = 186 bits (472), Expect = 6e-45
Identities = 92/108 (85%), Positives = 95/108 (87%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS I KKLKETSK EE+ S EETDVEIETASETKGTKQEQE TEEDPSPSLF
Sbjct: 236 YLGRIPSPIFTKKLKETSKTEEKGESEEETDVEIETASETKGTKQEQEGYTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT+DEFHFHF ETCY NSP+ E SYL
Sbjct: 296 SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFTETCYNNSPVYEVSYL 343
>gb|ADD30913.1| putative RF1 protein (chloroplast) [Berberidopsis corallina]
Length = 1909
Score = 182 bits (463), Expect = 6e-44
Identities = 91/108 (84%), Positives = 96/108 (88%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS IL KKLKE+S+ EER S EE DVEIET SETK TKQEQE STEEDPSPSLF
Sbjct: 236 YLGRIPSPILTKKLKESSETEERGESEEERDVEIETTSETKETKQEQEGSTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVN KEKT+DEFHFHFKETCY+NSP+ ETSYL
Sbjct: 296 SEEKEDPDKIDETEEIRVNRKEKTKDEFHFHFKETCYKNSPVYETSYL 343
>gb|AEK71706.1| hypothetical chloroplast RF1 [Berberidopsis corallina]
Length = 356
Score = 182 bits (463), Expect = 6e-44
Identities = 91/108 (84%), Positives = 96/108 (88%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS IL KKLKE+S+ EER S EE DVEIET SETK TKQEQE STEEDPSPSLF
Sbjct: 236 YLGRIPSPILTKKLKESSETEERGESEEERDVEIETTSETKETKQEQEGSTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVN KEKT+DEFHFHFKETCY+NSP+ ETSYL
Sbjct: 296 SEEKEDPDKIDETEEIRVNRKEKTKDEFHFHFKETCYKNSPVYETSYL 343
>gb|ALB78336.1| hypothetical chloroplast RF1 (chloroplast) [Heuchera parviflora
var. saurensis]
Length = 1870
Score = 182 bits (462), Expect = 8e-44
Identities = 90/108 (83%), Positives = 96/108 (88%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS + KKLKETS+ EER S EETDVEIET SETKGTK+EQE STEEDPSPSLF
Sbjct: 236 YLGRIPSPTVTKKLKETSETEERGESEEETDVEIETTSETKGTKEEQEGSTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNG EKT+DEFHFHFKETCY+NSP+ ETS L
Sbjct: 296 SEEKEDPDKIDETEEIRVNGTEKTKDEFHFHFKETCYKNSPVYETSDL 343
>gb|ADD30918.1| putative RF1 protein (chloroplast) [Heuchera sanguinea]
Length = 1866
Score = 182 bits (462), Expect = 8e-44
Identities = 90/108 (83%), Positives = 96/108 (88%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS + KKLKETS+ EER S EETDVEIET SETKGTK+EQE STEEDPSPSLF
Sbjct: 236 YLGRIPSPTVTKKLKETSETEERGESEEETDVEIETTSETKGTKEEQEGSTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNG EKT+DEFHFHFKETCY+NSP+ ETS L
Sbjct: 296 SEEKEDPDKIDETEEIRVNGTEKTKDEFHFHFKETCYKNSPVYETSDL 343
>gb|AEK71741.1| hypothetical chloroplast RF1 [Heuchera sanguinea]
Length = 422
Score = 182 bits (462), Expect = 8e-44
Identities = 90/108 (83%), Positives = 96/108 (88%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS + KKLKETS+ EER S EETDVEIET SETKGTK+EQE STEEDPSPSLF
Sbjct: 236 YLGRIPSPTVTKKLKETSETEERGESEEETDVEIETTSETKGTKEEQEGSTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNG EKT+DEFHFHFKETCY+NSP+ ETS L
Sbjct: 296 SEEKEDPDKIDETEEIRVNGTEKTKDEFHFHFKETCYKNSPVYETSDL 343
>ref|YP_009019849.1| hypothetical chloroplast RF1 (chloroplast) [Vitis rotundifolia]
gi|586947471|gb|AHJ91268.1| hypothetical chloroplast RF1
(chloroplast) [Vitis rotundifolia]
Length = 1893
Score = 180 bits (456), Expect = 4e-43
Identities = 91/108 (84%), Positives = 96/108 (88%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS IL KK+KETS+ EER S EETDVEIE SETKGTKQEQE STEEDPSPSLF
Sbjct: 236 YLGRIPSPILTKKMKETSETEERGESEEETDVEIERTSETKGTKQEQERSTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT+DE FHFKETCY+NSP+ ETSYL
Sbjct: 296 SEEKEDPDKIDETEEIRVNGKEKTKDE--FHFKETCYKNSPVYETSYL 341
>dbj|BAO01719.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
caucasica]
Length = 1893
Score = 180 bits (456), Expect = 4e-43
Identities = 91/108 (84%), Positives = 96/108 (88%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS IL KK+KETS+ EER S EETDVEIE SETKGTKQEQE STEEDPSPSLF
Sbjct: 236 YLGRIPSPILTKKMKETSETEERGESEEETDVEIERTSETKGTKQEQERSTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT+DE FHFKETCY+NSP+ ETSYL
Sbjct: 296 SEEKEDPDKIDETEEIRVNGKEKTKDE--FHFKETCYKNSPVYETSYL 341
>dbj|BAO01635.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
caucasica]
Length = 1893
Score = 180 bits (456), Expect = 4e-43
Identities = 91/108 (84%), Positives = 96/108 (88%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS IL KK+KETS+ EER S EETDVEIE SETKGTKQEQE STEEDPSPSLF
Sbjct: 236 YLGRIPSPILTKKMKETSETEERGESEEETDVEIERTSETKGTKQEQERSTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT+DE FHFKETCY+NSP+ ETSYL
Sbjct: 296 SEEKEDPDKIDETEEIRVNGKEKTKDE--FHFKETCYKNSPVYETSYL 341
>dbj|BAO01551.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
caucasica]
Length = 1893
Score = 180 bits (456), Expect = 4e-43
Identities = 91/108 (84%), Positives = 96/108 (88%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS IL KK+KETS+ EER S EETDVEIE SETKGTKQEQE STEEDPSPSLF
Sbjct: 236 YLGRIPSPILTKKMKETSETEERGESEEETDVEIERTSETKGTKQEQERSTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT+DE FHFKETCY+NSP+ ETSYL
Sbjct: 296 SEEKEDPDKIDETEEIRVNGKEKTKDE--FHFKETCYKNSPVYETSYL 341
>ref|YP_567136.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera]
gi|118577986|sp|Q0ZIW0.1|TI214_VITVI RecName:
Full=Protein TIC 214; AltName: Full=Translocon at the
inner envelope membrane of chloroplasts 214;
Short=AtTIC214 gi|91701709|gb|ABE47593.1| hypothetical
chloroplast RF1 (chloroplast) [Vitis vinifera]
Length = 1893
Score = 180 bits (456), Expect = 4e-43
Identities = 91/108 (84%), Positives = 96/108 (88%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS IL KK+KETS+ EER S EETDVEIE SETKGTKQEQE STEEDPSPSLF
Sbjct: 236 YLGRIPSPILTKKMKETSETEERGESEEETDVEIERTSETKGTKQEQERSTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT+DE FHFKETCY+NSP+ ETSYL
Sbjct: 296 SEEKEDPDKIDETEEIRVNGKEKTKDE--FHFKETCYKNSPVYETSYL 341
>gb|AEK71713.1| hypothetical chloroplast RF1 [Aucuba japonica]
Length = 337
Score = 179 bits (454), Expect = 7e-43
Identities = 88/102 (86%), Positives = 91/102 (89%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS I KKLKETSK EE+ S EETDVEIETASETKGTKQEQE TEEDPSPSLF
Sbjct: 236 YLGRIPSPIFTKKLKETSKTEEKGESEEETDVEIETASETKGTKQEQEGYTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPI 306
SEEKEDPDKIDETEEIRVNGKEKT+DEFHFHF ETCY NSP+
Sbjct: 296 SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFTETCYNNSPV 337
>ref|XP_010655325.1| PREDICTED: LOW QUALITY PROTEIN: putative membrane protein ycf1
[Vitis vinifera]
Length = 1033
Score = 178 bits (452), Expect = 1e-42
Identities = 90/108 (83%), Positives = 96/108 (88%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS IL KK+KETS+ EER S EETDVEIE S+TKGTKQEQE STEEDPSPSLF
Sbjct: 236 YLGRIPSPILTKKMKETSETEERGESEEETDVEIERTSKTKGTKQEQERSTEEDPSPSLF 295
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT+DE FHFKETCY+NSP+ ETSYL
Sbjct: 296 SEEKEDPDKIDETEEIRVNGKEKTKDE--FHFKETCYKNSPVYETSYL 341
>gb|AIP85267.1| Ycf1 (chloroplast) [Camellia sinensis]
Length = 1873
Score = 177 bits (450), Expect = 2e-42
Identities = 91/108 (84%), Positives = 93/108 (86%)
Frame = +1
Query: 1 YLGRIPSLILAKKLKETSKMEERRASAEETDVEIETASETKGTKQEQEESTEEDPSPSLF 180
YLGRIPS IL KKLKETSK EER DVEIET ETKGTKQEQE STEEDPSPSLF
Sbjct: 236 YLGRIPSPILTKKLKETSKTEER-------DVEIETTYETKGTKQEQEGSTEEDPSPSLF 288
Query: 181 SEEKEDPDKIDETEEIRVNGKEKTRDEFHFHFKETCYQNSPISETSYL 324
SEEKEDPDKIDETEEIRVNGKEKT+DEFHFHFKETCY+NSPI E SYL
Sbjct: 289 SEEKEDPDKIDETEEIRVNGKEKTKDEFHFHFKETCYKNSPIYEASYL 336