BLASTX nr result

ID: Cornus23_contig00039125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00039125
         (329 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010660000.1| PREDICTED: FRIGIDA-like protein 1 [Vitis vin...    59   1e-06
ref|XP_010270166.1| PREDICTED: truncated FRIGIDA-like protein 1 ...    59   2e-06
ref|XP_010097337.1| hypothetical protein L484_010213 [Morus nota...    56   9e-06
ref|XP_012089467.1| PREDICTED: LOW QUALITY PROTEIN: FRIGIDA-like...    56   9e-06
emb|CAN75645.1| hypothetical protein VITISV_031268 [Vitis vinifera]    56   9e-06

>ref|XP_010660000.1| PREDICTED: FRIGIDA-like protein 1 [Vitis vinifera]
          Length = 851

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
 Frame = -1

Query: 329 GGNVLHSHEEVDRSSSENSLFSNKVISSPMGPRVEFKSLCTNMEREGVSSL--------- 177
           G  +L S    ++S S+     N + SS + P  E K LC NM+ +G+ S          
Sbjct: 286 GTGILLSQVMTNQSPSKRLELKNAIASSSVRPCPELKLLCINMDGKGLWSFLNEHVKEHD 345

Query: 176 ---------IRFSLDPAKLVLDALQGCYYSNLKGNTGPRRDVLRPT-VIFLEQLMRVSPK 27
                    ++F+ DPA+LV+D LQ       + N G +  V+R + ++ LEQL R+SP 
Sbjct: 346 SIRCEVYYALQFAPDPAELVVDVLQVFDAPRSELNKGFKMGVIRKSCILLLEQLFRISPP 405

Query: 26  IKPRVQQ 6
           IKP V++
Sbjct: 406 IKPHVKE 412


>ref|XP_010270166.1| PREDICTED: truncated FRIGIDA-like protein 1 [Nelumbo nucifera]
          Length = 519

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 21/124 (16%)
 Frame = -1

Query: 311 SHEEVDRSSSENS--LFSNKVISSPMGPRVEFKSLCTNMEREGVSSLI------------ 174
           S  E D+S+ + S  L + K       PR E KSLC +M+  G+ S I            
Sbjct: 80  SPPEKDKSADKPSPHLPAKKPDEPERSPRPELKSLCVSMDGMGLRSYIIEHRKELPFVKD 139

Query: 173 ------RFSLDPAKLVLDALQGCYYSNLKGN-TGPRRDVLRPTVIFLEQLMRVSPKIKPR 15
                 R + DPA LVLDA+QG +  N KG+  G    + R  ++ LEQ   +SP+I+P 
Sbjct: 140 ELAGALRTASDPATLVLDAMQGFFPPNSKGDKDGELASIRRTCILLLEQSAAISPEIRPH 199

Query: 14  VQQE 3
           V+++
Sbjct: 200 VKEK 203


>ref|XP_010097337.1| hypothetical protein L484_010213 [Morus notabilis]
           gi|587878652|gb|EXB67647.1| hypothetical protein
           L484_010213 [Morus notabilis]
          Length = 869

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
 Frame = -1

Query: 329 GGNVLHSHEEVDRSSSENSLFSNKVISSPMGPRVEFKSLCTNMEREG------------- 189
           G + + SHE V+   S        ++SS   P  E KS C NM+ +              
Sbjct: 579 GRSSILSHEHVEDHDS--------LVSSSASPWPELKSFCINMDGKSLRLFLYNHAAEHD 630

Query: 188 -----VSSLIRFSLDPAKLVLDALQGC------YYSNLKGNTGPRRDVLRPTVIFLEQLM 42
                V   ++F+ DPAKLVLDA++G       +  +L  NT     V +  V+ LEQL+
Sbjct: 631 FMCGEVCDALQFASDPAKLVLDAMRGSLCVQPEFDKSLSINT-----VRKSCVLLLEQLI 685

Query: 41  RVSPKIKPRVQQE 3
            +SPKI PRV+ E
Sbjct: 686 TISPKINPRVKVE 698


>ref|XP_012089467.1| PREDICTED: LOW QUALITY PROTEIN: FRIGIDA-like protein 5 [Jatropha
           curcas]
          Length = 894

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
 Frame = -1

Query: 197 REGVSSLIRFSLDPAKLVLDALQGCYYSNL-KGNTGPRRDVLRPTVIFL-EQLMRVSPKI 24
           R  V + +R S DPAKLVLDA+ G Y  +L KG+      V+R + IFL EQLM++SP+I
Sbjct: 267 RTEVLTALRLSSDPAKLVLDAMHGFYPPHLKKGDMEFEEGVVRRSCIFLFEQLMKISPEI 326

Query: 23  KPRVQQE 3
           +P+V++E
Sbjct: 327 RPQVKKE 333


>emb|CAN75645.1| hypothetical protein VITISV_031268 [Vitis vinifera]
          Length = 666

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 19/116 (16%)
 Frame = -1

Query: 296 DRSSSENSLFSNKVISSPMGPRVEFKSLCTNMEREGVSSLI------------------R 171
           ++S S+     N + SS + P  E K LC NM+ +G+ S +                  +
Sbjct: 3   NQSPSKRLELKNAIASSSVRPCPELKLLCINMDGKGLWSFLNEHVKEHDSIRCEVYYALQ 62

Query: 170 FSLDPAKLVLDALQGCYYSNLKGNTGPRRDVLRPT-VIFLEQLMRVSPKIKPRVQQ 6
           F+ DPA+LV+D LQ       + N G +  V+R + ++ LEQL R+SP IKP V++
Sbjct: 63  FAPDPAELVVDVLQVFDAPRSELNKGFKMGVIRKSCILLLEQLFRISPPIKPHVKE 118


Top