BLASTX nr result
ID: Cornus23_contig00039113
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00039113
(323 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ELR99509.1| Photosynthetic reaction centre protein, partial [... 51 1e-09
gb|ELR98438.1| Photosynthetic reaction centre protein, partial [... 51 1e-09
ref|WP_015229298.1| photosystem II DII subunit, Q(A) protein [Da... 50 1e-09
ref|WP_015228154.1| photosystem II DII subunit, Q(A) protein [Da... 50 1e-09
ref|WP_006453491.1| photosystem II D2 protein [Synechococcus sp.... 53 1e-09
ref|WP_015170991.1| photosystem II D2 protein [Geitlerinema sp. ... 50 1e-09
gb|EDX87338.1| Photosynthetic reaction center protein [Synechoco... 53 1e-09
ref|XP_010088420.1| Photosystem II D2 protein [Morus notabilis] ... 69 2e-09
ref|WP_012307174.1| photosystem II D2 protein [Synechococcus sp.... 52 2e-09
ref|WP_017306012.1| photosystem II D2 protein [Spirulina subsalsa] 52 2e-09
ref|WP_015202410.1| photosystem II D2 protein [Crinalium epipsam... 52 2e-09
ref|WP_027269127.1| photosystem II D2 protein [Leptolyngbya sp. ... 50 2e-09
ref|WP_026072380.1| photosystem II D2 protein [Nodosilinea nodul... 50 2e-09
ref|WP_024547192.1| photosystem II D2 protein, partial [Synechoc... 52 2e-09
gb|KEI65548.1| PsbD [Planktothrix agardhii NIVA-CYA 126/8] 53 2e-09
ref|YP_009117829.1| photosystem II protein D2 [Gnetum gnemon] gi... 52 2e-09
ref|WP_015224756.1| photosystem II D2 protein [Halothece sp. PCC... 50 2e-09
ref|WP_011244758.1| photosystem II D2 protein 2 [Synechococcus e... 53 2e-09
ref|WP_011243185.1| MULTISPECIES: photosystem II reaction center... 53 2e-09
gb|AAA27357.1| D2 thylakoid protein [Synechococcus sp.] gi|15458... 53 2e-09
>gb|ELR99509.1| Photosynthetic reaction centre protein, partial [Gloeocapsa sp. PCC
73106]
Length = 126
Score = 50.8 bits (120), Expect(2) = 1e-09
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGL 249
RWLHFF+LF+PVTGLWM+ +GIVGL
Sbjct: 39 RWLHFFMLFVPVTGLWMSSVGIVGL 63
Score = 38.5 bits (88), Expect(2) = 1e-09
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
LGLNLRA+DFVS +I A+DPEFE
Sbjct: 63 LGLNLRAYDFVSQEIRAAEDPEFE 86
>gb|ELR98438.1| Photosynthetic reaction centre protein, partial [Gloeocapsa sp. PCC
73106]
Length = 109
Score = 50.8 bits (120), Expect(2) = 1e-09
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGL 249
RWLHFF+LF+PVTGLWM+ +GIVGL
Sbjct: 22 RWLHFFMLFVPVTGLWMSSVGIVGL 46
Score = 38.5 bits (88), Expect(2) = 1e-09
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
LGLNLRA+DFVS +I A+DPEFE
Sbjct: 46 LGLNLRAYDFVSQEIRAAEDPEFE 69
>ref|WP_015229298.1| photosystem II DII subunit, Q(A) protein [Dactylococcopsis salina]
gi|428694151|gb|AFZ50301.1| Photosystem II DII subunit,
Q(A) protein [Dactylococcopsis salina PCC 8305]
Length = 353
Score = 50.4 bits (119), Expect(2) = 1e-09
Identities = 19/25 (76%), Positives = 24/25 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGL 249
RWLHFF+LF+PVTGLWM+ +G+VGL
Sbjct: 266 RWLHFFMLFVPVTGLWMSSVGVVGL 290
Score = 38.5 bits (88), Expect(2) = 1e-09
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
LGLNLRA+DFVS +I A+DPEFE
Sbjct: 290 LGLNLRAYDFVSQEIRAAEDPEFE 313
>ref|WP_015228154.1| photosystem II DII subunit, Q(A) protein [Dactylococcopsis salina]
gi|428692991|gb|AFZ49141.1| Photosystem II DII subunit,
Q(A) protein [Dactylococcopsis salina PCC 8305]
Length = 353
Score = 50.4 bits (119), Expect(2) = 1e-09
Identities = 19/25 (76%), Positives = 24/25 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGL 249
RWLHFF+LF+PVTGLWM+ +G+VGL
Sbjct: 266 RWLHFFMLFVPVTGLWMSSVGVVGL 290
Score = 38.5 bits (88), Expect(2) = 1e-09
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
LGLNLRA+DFVS +I A+DPEFE
Sbjct: 290 LGLNLRAYDFVSQEIRAAEDPEFE 313
>ref|WP_006453491.1| photosystem II D2 protein [Synechococcus sp. PCC 7335]
gi|196188783|gb|EDX83747.1| photosystem II D2 protein
[Synechococcus sp. PCC 7335]
Length = 352
Score = 52.8 bits (125), Expect(2) = 1e-09
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGLA 246
RWLHFF+LF+PVTGLWM+ +GIVGLA
Sbjct: 265 RWLHFFMLFVPVTGLWMSSIGIVGLA 290
Score = 36.2 bits (82), Expect(2) = 1e-09
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
L LNLRA+DFVS +I A+DPEFE
Sbjct: 289 LALNLRAYDFVSQEIRAAEDPEFE 312
>ref|WP_015170991.1| photosystem II D2 protein [Geitlerinema sp. PCC 7407]
gi|427984280|gb|AFY65424.1| photosystem II D2 protein
(photosystem q(a) protein) [Geitlerinema sp. PCC 7407]
gi|427985728|gb|AFY66872.1| photosystem II D2 protein
(photosystem q(a) protein) [Geitlerinema sp. PCC 7407]
Length = 352
Score = 50.4 bits (119), Expect(2) = 1e-09
Identities = 19/25 (76%), Positives = 24/25 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGL 249
RWLHFF+LF+PVTGLWM+ +GI+GL
Sbjct: 265 RWLHFFMLFVPVTGLWMSSVGIIGL 289
Score = 38.5 bits (88), Expect(2) = 1e-09
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
LGLNLRA+DFVS +I A+DPEFE
Sbjct: 289 LGLNLRAYDFVSQEIRAAEDPEFE 312
>gb|EDX87338.1| Photosynthetic reaction center protein [Synechococcus sp. PCC 7335]
Length = 191
Score = 52.8 bits (125), Expect(2) = 1e-09
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGLA 246
RWLHFF+LF+PVTGLWM+ +GIVGLA
Sbjct: 104 RWLHFFMLFVPVTGLWMSSIGIVGLA 129
Score = 36.2 bits (82), Expect(2) = 1e-09
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
L LNLRA+DFVS +I A+DPEFE
Sbjct: 128 LALNLRAYDFVSQEIRAAEDPEFE 151
>ref|XP_010088420.1| Photosystem II D2 protein [Morus notabilis]
gi|587949980|gb|EXC35994.1| Photosystem II D2 protein
[Morus notabilis]
Length = 303
Score = 68.6 bits (166), Expect = 2e-09
Identities = 33/48 (68%), Positives = 37/48 (77%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGLA*TYVLLTSFLRKFAQRKILNLR 180
RWLHFF+LF+PVT LWM LG+VGLA LTSFLRK +KILNLR
Sbjct: 248 RWLHFFMLFVPVTSLWMRVLGVVGLALNLRALTSFLRKSVPQKILNLR 295
>ref|WP_012307174.1| photosystem II D2 protein [Synechococcus sp. PCC 7002]
gi|131298|sp|P20898.1|PSBD_SYNP2 RecName:
Full=Photosystem II D2 protein; Short=PSII D2 protein;
AltName: Full=Photosystem Q(A) protein
gi|154513|gb|AAA79119.1| photosystem II reaction center
D2 protein [Synechococcus sp. PCC 7002]
gi|2197202|gb|AAB61354.1| D2 protein of photosystem II
[Synechococcus sp. PCC 7002] gi|169885838|gb|ACA99551.1|
photosystem II D2 protein (photosystem q(a) protein)
[Synechococcus sp. PCC 7002] gi|169886466|gb|ACB00180.1|
photosystem II D2 protein [Synechococcus sp. PCC 7002]
gi|227609|prf||1707315A photosystem II D2 protein
Length = 352
Score = 52.4 bits (124), Expect(2) = 2e-09
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGLA 246
RWLHFF+LF+PVTGLWM+ +GIVGLA
Sbjct: 265 RWLHFFMLFVPVTGLWMSSVGIVGLA 290
Score = 36.2 bits (82), Expect(2) = 2e-09
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
L LNLRA+DFVS +I A+DPEFE
Sbjct: 289 LALNLRAYDFVSQEIRAAEDPEFE 312
>ref|WP_017306012.1| photosystem II D2 protein [Spirulina subsalsa]
Length = 352
Score = 52.4 bits (124), Expect(2) = 2e-09
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGLA 246
RWLHFF+LF+PVTGLWM+ +GIVGLA
Sbjct: 265 RWLHFFMLFVPVTGLWMSSVGIVGLA 290
Score = 36.2 bits (82), Expect(2) = 2e-09
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
L LNLRA+DFVS +I A+DPEFE
Sbjct: 289 LALNLRAYDFVSQEIRAAEDPEFE 312
>ref|WP_015202410.1| photosystem II D2 protein [Crinalium epipsammum]
gi|428246508|gb|AFZ12288.1| Photosystem II D2 protein
[Crinalium epipsammum PCC 9333]
gi|428246912|gb|AFZ12692.1| Photosystem II D2 protein
[Crinalium epipsammum PCC 9333]
Length = 352
Score = 52.4 bits (124), Expect(2) = 2e-09
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGLA 246
RWLHFF+LF+PVTGLWM+ +GIVGLA
Sbjct: 265 RWLHFFMLFVPVTGLWMSSVGIVGLA 290
Score = 36.2 bits (82), Expect(2) = 2e-09
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
L LNLRA+DFVS +I A+DPEFE
Sbjct: 289 LALNLRAYDFVSQEIRAAEDPEFE 312
>ref|WP_027269127.1| photosystem II D2 protein [Leptolyngbya sp. PCC 6406]
Length = 352
Score = 50.1 bits (118), Expect(2) = 2e-09
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGL 249
RWLHFF+LF+PVTGLWM+ +GIVGL
Sbjct: 265 RWLHFFMLFVPVTGLWMSAVGIVGL 289
Score = 38.5 bits (88), Expect(2) = 2e-09
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
LGLNLRA+DFVS +I A+DPEFE
Sbjct: 289 LGLNLRAYDFVSQEIRAAEDPEFE 312
>ref|WP_026072380.1| photosystem II D2 protein [Nodosilinea nodulosa]
Length = 352
Score = 50.1 bits (118), Expect(2) = 2e-09
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGL 249
RWLHFF+LF+PVTGLWM+ +GIVGL
Sbjct: 265 RWLHFFMLFVPVTGLWMSAVGIVGL 289
Score = 38.5 bits (88), Expect(2) = 2e-09
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
LGLNLRA+DFVS +I A+DPEFE
Sbjct: 289 LGLNLRAYDFVSQEIRAAEDPEFE 312
>ref|WP_024547192.1| photosystem II D2 protein, partial [Synechococcus sp. NKBG15041c]
Length = 241
Score = 52.4 bits (124), Expect(2) = 2e-09
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGLA 246
RWLHFF+LF+PVTGLWM+ +GIVGLA
Sbjct: 164 RWLHFFMLFVPVTGLWMSSVGIVGLA 189
Score = 36.2 bits (82), Expect(2) = 2e-09
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
L LNLRA+DFVS +I A+DPEFE
Sbjct: 188 LALNLRAYDFVSQEIRAAEDPEFE 211
>gb|KEI65548.1| PsbD [Planktothrix agardhii NIVA-CYA 126/8]
Length = 373
Score = 52.8 bits (125), Expect(2) = 2e-09
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGLA 246
RWLHFF+LF+PVTGLWM+ +GIVGLA
Sbjct: 286 RWLHFFMLFVPVTGLWMSSIGIVGLA 311
Score = 35.4 bits (80), Expect(2) = 2e-09
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
L LNLRA+DFVS ++ A+DPEFE
Sbjct: 310 LALNLRAYDFVSQELRAAEDPEFE 333
>ref|YP_009117829.1| photosystem II protein D2 [Gnetum gnemon]
gi|748991015|gb|AJE71457.1| photosystem II protein D2
(plastid) [Gnetum gnemon]
Length = 353
Score = 52.0 bits (123), Expect(2) = 2e-09
Identities = 20/26 (76%), Positives = 25/26 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGLA 246
RWLHFF+LF+PVTGLWM+ +G+VGLA
Sbjct: 266 RWLHFFLLFVPVTGLWMSAIGVVGLA 291
Score = 36.2 bits (82), Expect(2) = 2e-09
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
L LNLRA+DFVS +I A+DPEFE
Sbjct: 290 LALNLRAYDFVSQEIRAAEDPEFE 313
>ref|WP_015224756.1| photosystem II D2 protein [Halothece sp. PCC 7418]
gi|428689584|gb|AFZ42878.1| photosystem II D2 protein
(photosystem q(a) protein) [Halothece sp. PCC 7418]
gi|428691243|gb|AFZ44537.1| photosystem II D2 protein
(photosystem q(a) protein) [Halothece sp. PCC 7418]
Length = 353
Score = 49.7 bits (117), Expect(2) = 2e-09
Identities = 19/25 (76%), Positives = 24/25 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGL 249
RWLHFF+LF+PVTGLWM+ +G+VGL
Sbjct: 266 RWLHFFMLFVPVTGLWMSAVGVVGL 290
Score = 38.5 bits (88), Expect(2) = 2e-09
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
LGLNLRA+DFVS +I A+DPEFE
Sbjct: 290 LGLNLRAYDFVSQEIRAAEDPEFE 313
>ref|WP_011244758.1| photosystem II D2 protein 2 [Synechococcus elongatus]
gi|81561231|sp|Q5MZ82.1|PSBD2_SYNP6 RecName:
Full=Photosystem II D2 protein 2; Short=PSII D2 protein
2; AltName: Full=Photosystem Q(A) protein 2
gi|56687416|dbj|BAD80638.1| photosystem II reaction
center D2 protein [Synechococcus elongatus PCC 6301]
Length = 352
Score = 52.8 bits (125), Expect(2) = 2e-09
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGLA 246
RWLHFF+LF+PVTGLWM+ +GIVGLA
Sbjct: 265 RWLHFFMLFVPVTGLWMSSIGIVGLA 290
Score = 35.4 bits (80), Expect(2) = 2e-09
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
L LNLRA+DFVS ++ A+DPEFE
Sbjct: 289 LALNLRAYDFVSQELRAAEDPEFE 312
>ref|WP_011243185.1| MULTISPECIES: photosystem II reaction center D2 protein
[Synechococcus] gi|81596306|sp|Q5N3Q7.1|PSBD1_SYNP6
RecName: Full=Photosystem II D2 protein 1; Short=PSII D2
protein 1; AltName: Full=Photosystem Q(A) protein 1
gi|93141301|sp|P11005.2|PSBD_SYNE7 RecName:
Full=Photosystem II D2 protein; Short=PSII D2 protein;
AltName: Full=Photosystem Q(A) protein
gi|56685841|dbj|BAD79063.1| photosystem II reaction
center D2 protein [Synechococcus elongatus PCC 6301]
gi|81168347|gb|ABB56687.1| photosystem II D2 protein
(photosystem q(a) protein) [Synechococcus elongatus PCC
7942] gi|81169327|gb|ABB57667.1| photosystem II D2
protein (photosystem q(a) protein) [Synechococcus
elongatus PCC 7942] gi|745802573|gb|AJD57840.1|
Photosystem II D2 protein [Synechococcus sp. UTEX 2973]
gi|745803503|gb|AJD58770.1| Photosystem II D2 protein
[Synechococcus sp. UTEX 2973]
Length = 352
Score = 52.8 bits (125), Expect(2) = 2e-09
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGLA 246
RWLHFF+LF+PVTGLWM+ +GIVGLA
Sbjct: 265 RWLHFFMLFVPVTGLWMSSIGIVGLA 290
Score = 35.4 bits (80), Expect(2) = 2e-09
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
L LNLRA+DFVS ++ A+DPEFE
Sbjct: 289 LALNLRAYDFVSQELRAAEDPEFE 312
>gb|AAA27357.1| D2 thylakoid protein [Synechococcus sp.] gi|154588|gb|AAA27358.1|
psbDI thylakoid protein [Synechococcus sp.]
Length = 352
Score = 52.8 bits (125), Expect(2) = 2e-09
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = -1
Query: 323 RWLHFFILFLPVTGLWMNDLGIVGLA 246
RWLHFF+LF+PVTGLWM+ +GIVGLA
Sbjct: 265 RWLHFFMLFVPVTGLWMSSIGIVGLA 290
Score = 35.4 bits (80), Expect(2) = 2e-09
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -3
Query: 252 LGLNLRAFDFVS*KICTAKDPEFE 181
L LNLRA+DFVS ++ A+DPEFE
Sbjct: 289 LALNLRAYDFVSQELRAAEDPEFE 312