BLASTX nr result

ID: Cornus23_contig00039089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00039089
         (334 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFA77338.1| calcium-binding protein [Polysphondylium pallidum...    60   5e-07
ref|XP_003289206.1| hypothetical protein DICPUDRAFT_88400 [Dicty...    59   1e-06

>gb|EFA77338.1| calcium-binding protein [Polysphondylium pallidum PN500]
          Length = 502

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 YQRVNYKYSNAYDPLTPYSHPDVDPAQ-TGLFMQASAVFRAYDKNHNGVLTRREWKKAMR 69
           Y R +Y Y++ Y     +  P   PA      MQASA FR +D N++G L ++E+K+A++
Sbjct: 404 YTRQSYSYASPYSRSAAFVIPVGLPAHLVAKMMQASAAFRMFDTNYSGSLNKKEFKRALK 463

Query: 68  QLGVTFSRHDGKKIFSMVDTNH 3
            +G  FS+   K +F  +D+N+
Sbjct: 464 HMGFYFSKGQSKMLFHQIDSNY 485


>ref|XP_003289206.1| hypothetical protein DICPUDRAFT_88400 [Dictyostelium purpureum]
           gi|325080734|gb|EGC34277.1| hypothetical protein
           DICPUDRAFT_88400 [Dictyostelium purpureum]
          Length = 391

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
 Frame = -3

Query: 263 GYWPQS-----YQRVNYKYSNAYDPLTPYSHPDVDPAQ-TGLFMQASAVFRAYDKNHNGV 102
           GY  QS     Y R +Y Y +AY     +  P   PA      MQASA FR +D N +G 
Sbjct: 287 GYGAQSIAASPYVRGSYTYGSAYSRTATFVVPVGLPAHLVTKMMQASAAFRIHDYNCSGT 346

Query: 101 LTRREWKKAMRQLGVTFSRHDGKKIFSMVDTNH 3
           L+++E+KK ++ LGV FS+   K +F  +D ++
Sbjct: 347 LSKKEFKKCLKHLGVYFSKGQNKMLFYQIDRDY 379


Top