BLASTX nr result
ID: Cornus23_contig00039040
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00039040
(326 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008243389.1| PREDICTED: uncharacterized protein LOC103341... 80 4e-13
ref|XP_008232511.1| PREDICTED: uncharacterized protein LOC103331... 78 3e-12
ref|XP_008223134.1| PREDICTED: uncharacterized protein LOC103322... 78 3e-12
gb|ABA95405.1| retrotransposon protein, putative, unclassified [... 77 6e-12
ref|XP_008237127.1| PREDICTED: uncharacterized protein LOC103335... 71 7e-12
emb|CAH67929.1| H0211F06-OSIGBa0153M17.1 [Oryza sativa Indica Gr... 75 2e-11
emb|CAE76044.1| B1248C03.3 [Oryza sativa Japonica Group] gi|3856... 75 2e-11
gb|AAQ56457.1| putative reverse transcriptase [Oryza sativa Japo... 75 2e-11
gb|AAM74403.1|AC120497_3 Putative retroelement [Oryza sativa Jap... 75 2e-11
gb|ABA97838.1| retrotransposon protein, putative, unclassified [... 74 5e-11
gb|ABA97058.1| retrotransposon protein, putative, unclassified [... 74 5e-11
gb|ABA97439.1| retrotransposon protein, putative, unclassified [... 74 5e-11
gb|ABA93663.1| retrotransposon protein, putative, unclassified [... 74 5e-11
gb|ABA97489.1| retrotransposon protein, putative, unclassified [... 73 7e-11
gb|ABA97964.1| retrotransposon protein, putative, unclassified [... 73 7e-11
gb|AAM19047.1|AC099774_9 putative retrotransposon [Oryza sativa ... 73 7e-11
emb|CAE01655.2| OSJNBb0043H09.6 [Oryza sativa Japonica Group] 73 7e-11
ref|XP_008354287.1| PREDICTED: uncharacterized protein LOC103417... 73 9e-11
gb|ABB47077.1| retrotransposon protein, putative, unclassified [... 73 9e-11
gb|ABA97504.1| retrotransposon protein, putative, unclassified [... 73 9e-11
>ref|XP_008243389.1| PREDICTED: uncharacterized protein LOC103341621 [Prunus mume]
Length = 1314
Score = 80.5 bits (197), Expect = 4e-13
Identities = 40/81 (49%), Positives = 54/81 (66%)
Frame = +1
Query: 58 PRYKTLLLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSREL 237
P + L EINLG +DPRPT+IS LL+ ++LV + +E+KD F W +M GL REL
Sbjct: 212 PEVEDPLQEINLGTGEDPRPTFISALLKEPLKNELVALLQEFKDCFAWHYHEMPGLDREL 271
Query: 238 VKHQVPMKEGYKTYKYQARRM 300
V+H++P+KEGY K RRM
Sbjct: 272 VEHKLPIKEGYLPVKQARRRM 292
>ref|XP_008232511.1| PREDICTED: uncharacterized protein LOC103331645 [Prunus mume]
Length = 1104
Score = 77.8 bits (190), Expect = 3e-12
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +1
Query: 58 PRYKTLLLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSREL 237
P + L EINLG +DPRPT+IS LL+ +LV + +E+KD F W +M GL R L
Sbjct: 34 PEVEDPLQEINLGTGEDPRPTFISALLKEPLKKELVALLQEFKDCFAWHYHEMPGLDRNL 93
Query: 238 VKHQVPMKEGYKTYKYQARRM 300
V+H++P+KEGY K RRM
Sbjct: 94 VEHKLPIKEGYLPVKQARRRM 114
>ref|XP_008223134.1| PREDICTED: uncharacterized protein LOC103322954 [Prunus mume]
Length = 1107
Score = 77.8 bits (190), Expect = 3e-12
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +1
Query: 58 PRYKTLLLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSREL 237
P + L EINLG +DPRPT+IS LL+ +LV + +E+KD F W +M GL R L
Sbjct: 34 PEVEDPLQEINLGTGEDPRPTFISALLKEPLKKELVALLQEFKDCFAWHYHEMPGLDRNL 93
Query: 238 VKHQVPMKEGYKTYKYQARRM 300
V+H++P+KEGY K RRM
Sbjct: 94 VEHKLPIKEGYLPVKQARRRM 114
>gb|ABA95405.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 431
Score = 76.6 bits (187), Expect = 6e-12
Identities = 34/74 (45%), Positives = 53/74 (71%)
Frame = +1
Query: 76 LLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSRELVKHQVP 255
L E+++G D PRPT+IS+ L +F KL+++ +EY+D F W+ +M GLSR +V+H++P
Sbjct: 312 LEEVDIGPGDKPRPTFISKNLSSEFRTKLIELLKEYRDCFAWEYFEMPGLSRLIVQHRLP 371
Query: 256 MKEGYKTYKYQARR 297
+K GY+ YK RR
Sbjct: 372 IKPGYRLYKQPPRR 385
>ref|XP_008237127.1| PREDICTED: uncharacterized protein LOC103335872 [Prunus mume]
Length = 779
Score = 71.2 bits (173), Expect(2) = 7e-12
Identities = 34/75 (45%), Positives = 49/75 (65%)
Frame = +1
Query: 76 LLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSRELVKHQVP 255
L EINLG +DPRPT+IS LLE +++ + +++D F W +M L R+LV+H++P
Sbjct: 354 LQEINLGIEEDPRPTFISTLLEEPLKSEIITLLHDFRDCFTWHYHEMPILDRKLVEHKLP 413
Query: 256 MKEGYKTYKYQARRM 300
+KEGY K RRM
Sbjct: 414 IKEGYLPIKQARRRM 428
Score = 25.4 bits (54), Expect(2) = 7e-12
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 3 AIQIEELKEAPAKLDDV*SEVQDPFIRDQLG 95
++Q E L PA LDD EV+DP LG
Sbjct: 330 SLQEEVLDFVPAALDDSLLEVEDPLQEINLG 360
>emb|CAH67929.1| H0211F06-OSIGBa0153M17.1 [Oryza sativa Indica Group]
Length = 1018
Score = 75.1 bits (183), Expect = 2e-11
Identities = 33/74 (44%), Positives = 53/74 (71%)
Frame = +1
Query: 76 LLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSRELVKHQVP 255
L E+++G +D RPT+IS+ L +F KL+K+ +EY+D F W+ +M GLSR +V+H +P
Sbjct: 613 LEEVDIGPVDRSRPTFISKNLSSEFTTKLIKLLKEYRDCFAWEYFEMLGLSRSIVEHWLP 672
Query: 256 MKEGYKTYKYQARR 297
+K GY+ Y+ +RR
Sbjct: 673 IKPGYRPYQQPSRR 686
>emb|CAE76044.1| B1248C03.3 [Oryza sativa Japonica Group] gi|38569163|emb|CAE75872.1|
OSJNBa0042N22.17 [Oryza sativa Japonica Group]
Length = 1436
Score = 75.1 bits (183), Expect = 2e-11
Identities = 33/74 (44%), Positives = 53/74 (71%)
Frame = +1
Query: 76 LLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSRELVKHQVP 255
L EI++G D PRPT+IS+ L +F KL+++ +E++D F W+ +M GLSR +V+H++P
Sbjct: 1055 LEEIDIGPGDRPRPTFISKNLSSEFRTKLIELLKEFRDCFAWEYHEMPGLSRSIVEHRLP 1114
Query: 256 MKEGYKTYKYQARR 297
+K G+K Y+ RR
Sbjct: 1115 LKPGFKPYQQPLRR 1128
>gb|AAQ56457.1| putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1573
Score = 74.7 bits (182), Expect = 2e-11
Identities = 31/77 (40%), Positives = 54/77 (70%)
Frame = +1
Query: 76 LLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSRELVKHQVP 255
L E+++G PRPT++++ + D+ K++++ +EY D+F W+ +M GLSRELV+H++P
Sbjct: 1032 LEEVDIGDGTKPRPTFVNKNMRADYKVKVIELLKEYVDYFAWEYHEMPGLSRELVEHRLP 1091
Query: 256 MKEGYKTYKYQARRMLP 306
+K G++ YK RR P
Sbjct: 1092 IKPGFRPYKQPPRRFNP 1108
>gb|AAM74403.1|AC120497_3 Putative retroelement [Oryza sativa Japonica Group]
Length = 1844
Score = 74.7 bits (182), Expect = 2e-11
Identities = 31/77 (40%), Positives = 55/77 (71%)
Frame = +1
Query: 76 LLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSRELVKHQVP 255
L E+++G PRPT++++ ++ D+ K++++ +EY D F W+ +M GLSRELV+H++P
Sbjct: 1196 LEEVDIGDETKPRPTFVNKNMKADYKVKIIELLKEYVDCFAWEYHEMPGLSRELVEHRLP 1255
Query: 256 MKEGYKTYKYQARRMLP 306
+K G++ YK +RR P
Sbjct: 1256 IKPGFRPYKQPSRRFNP 1272
>gb|ABA97838.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 936
Score = 73.6 bits (179), Expect = 5e-11
Identities = 31/69 (44%), Positives = 52/69 (75%)
Frame = +1
Query: 76 LLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSRELVKHQVP 255
L E+++G D PRPT+IS++L +F KL ++ +EY+D F W+ +M+GLSR +V+H++P
Sbjct: 569 LEEVDIGPGDRPRPTFISKILSPEFKTKLTELLKEYRDCFAWEYYEMTGLSRSIVEHRLP 628
Query: 256 MKEGYKTYK 282
+K GYK ++
Sbjct: 629 IKPGYKPHQ 637
>gb|ABA97058.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1123
Score = 73.6 bits (179), Expect = 5e-11
Identities = 34/90 (37%), Positives = 58/90 (64%)
Frame = +1
Query: 37 QNLTTCNPRYKTLLLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKM 216
Q T+ +P L E+++G PRPT++++ + D+ K++++ +EY D F W+ +M
Sbjct: 412 QGFTSADP-----LEEVDIGDGIKPRPTFVNKNMRADYKVKIIELLKEYVDCFAWEYHEM 466
Query: 217 SGLSRELVKHQVPMKEGYKTYKYQARRMLP 306
GLSRELV+H++P+K G++ YK RR P
Sbjct: 467 PGLSRELVEHRLPIKPGFRPYKQPPRRFNP 496
>gb|ABA97439.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 938
Score = 73.6 bits (179), Expect = 5e-11
Identities = 35/90 (38%), Positives = 58/90 (64%)
Frame = +1
Query: 37 QNLTTCNPRYKTLLLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKM 216
+ T+ NP L E+++G PRPT+I++ L D+ K++++ +EY D F W+ ++
Sbjct: 399 KGFTSANP-----LEEVDIGDGIKPRPTFINKNLRADYKVKIIELLKEYVDCFAWEYHEI 453
Query: 217 SGLSRELVKHQVPMKEGYKTYKYQARRMLP 306
GLSRELV+H++P+K G++ YK RR P
Sbjct: 454 PGLSRELVEHRLPIKPGFRPYKQPPRRFNP 483
>gb|ABA93663.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1412
Score = 73.6 bits (179), Expect = 5e-11
Identities = 34/90 (37%), Positives = 58/90 (64%)
Frame = +1
Query: 37 QNLTTCNPRYKTLLLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKM 216
Q T+ +P L E+++G PRPT++++ + D+ K++++ +EY D F W+ +M
Sbjct: 1045 QGFTSADP-----LEEVDIGDGIKPRPTFVNKNMRADYKVKIIELLKEYVDCFAWEYHEM 1099
Query: 217 SGLSRELVKHQVPMKEGYKTYKYQARRMLP 306
GLSRELV+H++P+K G++ YK RR P
Sbjct: 1100 PGLSRELVEHRLPIKPGFRPYKQPPRRFNP 1129
>gb|ABA97489.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1226
Score = 73.2 bits (178), Expect = 7e-11
Identities = 31/77 (40%), Positives = 53/77 (68%)
Frame = +1
Query: 76 LLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSRELVKHQVP 255
L E++ G PRPT++++ + D+ K++++ +EY D+F W+ +M GLSRELV+H++P
Sbjct: 172 LEEVDTGDGTKPRPTFVNKNMRADYKVKIIELLKEYVDWFAWEYHEMPGLSRELVEHRLP 231
Query: 256 MKEGYKTYKYQARRMLP 306
+K G++ YK RR P
Sbjct: 232 IKPGFRPYKQPPRRFNP 248
>gb|ABA97964.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1873
Score = 73.2 bits (178), Expect = 7e-11
Identities = 31/77 (40%), Positives = 53/77 (68%)
Frame = +1
Query: 76 LLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSRELVKHQVP 255
L E+++G PRPT++++ + D+ K++++ +EY D F W+ +M GLSRELV+H++P
Sbjct: 1101 LEEVDIGDGTKPRPTFVNKNMRADYKVKIIELLKEYVDCFAWEYHEMPGLSRELVEHRLP 1160
Query: 256 MKEGYKTYKYQARRMLP 306
+K G++ YK RR P
Sbjct: 1161 IKPGFRPYKQPPRRFNP 1177
>gb|AAM19047.1|AC099774_9 putative retrotransposon [Oryza sativa Japonica Group]
Length = 1800
Score = 73.2 bits (178), Expect = 7e-11
Identities = 34/90 (37%), Positives = 56/90 (62%)
Frame = +1
Query: 37 QNLTTCNPRYKTLLLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKM 216
Q T+ +P L E+++G PRPT++++ + D+ K++K+ +EY D F W +M
Sbjct: 841 QGFTSADP-----LKEVDIGNGTKPRPTFVNKNMRADYKVKIIKLLKEYVDCFAWKYHEM 895
Query: 217 SGLSRELVKHQVPMKEGYKTYKYQARRMLP 306
GLSRELV+H++P+K G++ YK R P
Sbjct: 896 PGLSRELVEHRLPIKPGFRPYKQPPRHFNP 925
>emb|CAE01655.2| OSJNBb0043H09.6 [Oryza sativa Japonica Group]
Length = 751
Score = 73.2 bits (178), Expect = 7e-11
Identities = 33/74 (44%), Positives = 51/74 (68%)
Frame = +1
Query: 76 LLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSRELVKHQVP 255
L E+++G D RPT+IS+ L +F KL+K+ +EY+D F W+ +M GLSR +V+H +P
Sbjct: 341 LEEVDIGPGDRSRPTFISKNLSSEFRTKLIKLLKEYRDCFAWEYFEMPGLSRSIVEHWLP 400
Query: 256 MKEGYKTYKYQARR 297
+K GY+ Y+ RR
Sbjct: 401 IKPGYRPYQQPPRR 414
>ref|XP_008354287.1| PREDICTED: uncharacterized protein LOC103417907 [Malus domestica]
Length = 1007
Score = 72.8 bits (177), Expect = 9e-11
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = +1
Query: 58 PRYKTLLLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSREL 237
P + L I+LG +DPRP IS LL ++ K++ + +E+KD F W ++M GL L
Sbjct: 89 PEVQDPLEVIDLGTEEDPRPIQISGLLRIEDRAKIISLXQEFKDCFAWHYTEMPGLDPAL 148
Query: 238 VKHQVPMKEGYKTYKYQARRMLPE 309
V+H++P+KEGYK K RRM E
Sbjct: 149 VEHRMPIKEGYKPVKXAPRRMSKE 172
>gb|ABB47077.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1663
Score = 72.8 bits (177), Expect = 9e-11
Identities = 33/74 (44%), Positives = 52/74 (70%)
Frame = +1
Query: 76 LLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSRELVKHQVP 255
L EI++G D PRPT+IS+ L +F KL+++ +EY+D F W+ +M GLSR +V+H++P
Sbjct: 916 LEEIDIGPGDRPRPTFISKNLSPEFRTKLIELLKEYRDCFAWEYYEMPGLSRSIVEHRLP 975
Query: 256 MKEGYKTYKYQARR 297
+K G + Y+ RR
Sbjct: 976 IKTGVRPYQQPPRR 989
>gb|ABA97504.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 562
Score = 72.8 bits (177), Expect = 9e-11
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +1
Query: 76 LLEINLGAMDDPRPTYISELLELDF*DKLVKIPREYKDFFVWDCSKMSGLSRELVKHQVP 255
L EI++G D PRPT+IS L +F KL+++ +EYKD F W+ +M GLSR +V+H++P
Sbjct: 40 LEEIDIGPGDRPRPTFISNNLSPEFRAKLIELLKEYKDCFAWEYYEMPGLSRSIVEHRLP 99
Query: 256 MKEGYKTYKYQARR 297
+K G + Y+ RR
Sbjct: 100 IKPGVRPYQQLPRR 113