BLASTX nr result

ID: Cornus23_contig00038783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00038783
         (316 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004352903.1| START domain containing protein [Acanthamoeb...    75   2e-11
ref|XP_004339568.1| START domain containing protein [Acanthamoeb...    64   3e-08

>ref|XP_004352903.1| START domain containing protein [Acanthamoeba castellanii str.
           Neff] gi|440802446|gb|ELR23375.1| START domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 204

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
 Frame = -3

Query: 311 MTD--AEIQQAVKDAQEFATNSDGWKVENDGTGAVLDSKPVTGSSINAFRVKGNVRATPQ 138
           MTD  A  ++ +  A+E    +DGW    +  G +L+++P  GS IN +RV G V  +P+
Sbjct: 1   MTDYTAIAKETLNLAKELREMADGWTTLKEAEGVLLEARPREGSYINCYRVSGKVARSPK 60

Query: 137 KLADLVWGWGEADWKKWSSDIESYQVLETPSE---NTRIVHQVNKLQW 3
           + A+  W WG+ +W+K S+D++ Y+V     E   + +IV+Q   L W
Sbjct: 61  EAAEQFWNWGKEEWQKMSADVQEYEVKVPDLEGNPDMKIVYQRAALPW 108


>ref|XP_004339568.1| START domain containing protein [Acanthamoeba castellanii str.
           Neff] gi|440796446|gb|ELR17555.1| START domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 205

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 26/85 (30%), Positives = 49/85 (57%)
 Frame = -3

Query: 257 NSDGWKVENDGTGAVLDSKPVTGSSINAFRVKGNVRATPQKLADLVWGWGEADWKKWSSD 78
           + +GW     G G  L+ + + G  I AF+V+G +    ++  D +W + + +W+K  SD
Sbjct: 23  SDNGWTPRKQGEGCTLEERELPGEPIKAFKVEGIINRPAKECGDKLWNFRQTEWQKMDSD 82

Query: 77  IESYQVLETPSENTRIVHQVNKLQW 3
            E + V+E   ++ R+V+Q+NK+ W
Sbjct: 83  CELFNVVE-EGDDLRLVYQLNKIPW 106


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