BLASTX nr result
ID: Cornus23_contig00038595
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00038595
(271 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004297907.1| PREDICTED: DNA ligase 4 [Fragaria vesca subs... 84 4e-14
ref|XP_010273585.1| PREDICTED: putative DNA ligase 4 isoform X3 ... 82 2e-13
ref|XP_010273584.1| PREDICTED: DNA ligase 4 isoform X2 [Nelumbo ... 82 2e-13
ref|XP_010273583.1| PREDICTED: DNA ligase 4 isoform X1 [Nelumbo ... 82 2e-13
ref|XP_009359940.1| PREDICTED: DNA ligase 4 [Pyrus x bretschneid... 82 2e-13
ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume] 80 5e-13
ref|XP_007226783.1| hypothetical protein PRUPE_ppa018049mg, part... 80 5e-13
ref|XP_011648959.1| PREDICTED: DNA ligase 4 isoform X1 [Cucumis ... 78 3e-12
ref|XP_011648960.1| PREDICTED: DNA ligase 4 isoform X2 [Cucumis ... 78 3e-12
ref|XP_008388689.1| PREDICTED: DNA ligase 4 [Malus domestica] 77 4e-12
ref|XP_010545385.1| PREDICTED: DNA ligase 4 isoform X2 [Tarenaya... 77 5e-12
ref|XP_010545384.1| PREDICTED: DNA ligase 4 isoform X1 [Tarenaya... 77 5e-12
ref|XP_002527709.1| DNA ligase IV, putative [Ricinus communis] g... 77 5e-12
dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana] 76 9e-12
ref|XP_011017671.1| PREDICTED: DNA ligase 4 isoform X2 [Populus ... 76 9e-12
ref|XP_011017670.1| PREDICTED: DNA ligase 4 isoform X1 [Populus ... 76 9e-12
ref|XP_010443391.1| PREDICTED: DNA ligase 4-like [Camelina sativa] 76 9e-12
ref|XP_010451850.1| PREDICTED: DNA ligase 4 isoform X1 [Camelina... 76 9e-12
ref|XP_010046928.1| PREDICTED: DNA ligase 4 isoform X1 [Eucalypt... 76 9e-12
ref|XP_008451172.1| PREDICTED: DNA ligase 4 isoform X2 [Cucumis ... 76 9e-12
>ref|XP_004297907.1| PREDICTED: DNA ligase 4 [Fragaria vesca subsp. vesca]
Length = 1188
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/47 (82%), Positives = 43/47 (91%)
Frame = +1
Query: 67 KTKFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
+TKFSVL SLFNWIQRSKTSA +SKFRKFLDNFCKPSDYF +IRL+
Sbjct: 7 ETKFSVLCSLFNWIQRSKTSALKRSKFRKFLDNFCKPSDYFAAIRLV 53
>ref|XP_010273585.1| PREDICTED: putative DNA ligase 4 isoform X3 [Nelumbo nucifera]
Length = 1099
Score = 81.6 bits (200), Expect = 2e-13
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = +1
Query: 73 KFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
KFSVL SLFNW+QRSK+SAK +SKFRKFLDNFCKP DYF++IRLI
Sbjct: 7 KFSVLCSLFNWMQRSKSSAKKRSKFRKFLDNFCKPGDYFSAIRLI 51
>ref|XP_010273584.1| PREDICTED: DNA ligase 4 isoform X2 [Nelumbo nucifera]
Length = 1143
Score = 81.6 bits (200), Expect = 2e-13
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = +1
Query: 73 KFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
KFSVL SLFNW+QRSK+SAK +SKFRKFLDNFCKP DYF++IRLI
Sbjct: 7 KFSVLCSLFNWMQRSKSSAKKRSKFRKFLDNFCKPGDYFSAIRLI 51
>ref|XP_010273583.1| PREDICTED: DNA ligase 4 isoform X1 [Nelumbo nucifera]
Length = 1168
Score = 81.6 bits (200), Expect = 2e-13
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = +1
Query: 73 KFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
KFSVL SLFNW+QRSK+SAK +SKFRKFLDNFCKP DYF++IRLI
Sbjct: 7 KFSVLCSLFNWMQRSKSSAKKRSKFRKFLDNFCKPGDYFSAIRLI 51
>ref|XP_009359940.1| PREDICTED: DNA ligase 4 [Pyrus x bretschneideri]
Length = 1163
Score = 81.6 bits (200), Expect = 2e-13
Identities = 37/47 (78%), Positives = 43/47 (91%)
Frame = +1
Query: 67 KTKFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
+TKFSVL SLFNW+Q+SKTS +SKFRKFLDNFCKP+DYF+SIRLI
Sbjct: 5 ETKFSVLCSLFNWMQKSKTSTLKRSKFRKFLDNFCKPADYFSSIRLI 51
>ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume]
Length = 1130
Score = 80.5 bits (197), Expect = 5e-13
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +1
Query: 67 KTKFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
+TKFSVL SLFNW+QRSKTS +SKFRKFLD FCKP+DYF+SIRLI
Sbjct: 4 ETKFSVLCSLFNWMQRSKTSTLKRSKFRKFLDTFCKPADYFDSIRLI 50
>ref|XP_007226783.1| hypothetical protein PRUPE_ppa018049mg, partial [Prunus persica]
gi|462423719|gb|EMJ27982.1| hypothetical protein
PRUPE_ppa018049mg, partial [Prunus persica]
Length = 539
Score = 80.5 bits (197), Expect = 5e-13
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +1
Query: 67 KTKFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
+TKFSVL SLFNW+QRSKTS +SKFRKFLD FCKP+DYF+SIRLI
Sbjct: 4 ETKFSVLCSLFNWMQRSKTSTLKRSKFRKFLDTFCKPADYFDSIRLI 50
>ref|XP_011648959.1| PREDICTED: DNA ligase 4 isoform X1 [Cucumis sativus]
Length = 1215
Score = 77.8 bits (190), Expect = 3e-12
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = +1
Query: 61 PPKTKFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
P KF+VLSSLF+WIQRSK+SAK +SKFRKFLD FC PS YF++IRLI
Sbjct: 2 PEPIKFAVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCSPSHYFSAIRLI 50
>ref|XP_011648960.1| PREDICTED: DNA ligase 4 isoform X2 [Cucumis sativus]
gi|700206059|gb|KGN61178.1| hypothetical protein
Csa_2G061570 [Cucumis sativus]
Length = 1214
Score = 77.8 bits (190), Expect = 3e-12
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = +1
Query: 61 PPKTKFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
P KF+VLSSLF+WIQRSK+SAK +SKFRKFLD FC PS YF++IRLI
Sbjct: 2 PEPIKFAVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCSPSHYFSAIRLI 50
>ref|XP_008388689.1| PREDICTED: DNA ligase 4 [Malus domestica]
Length = 1075
Score = 77.4 bits (189), Expect = 4e-12
Identities = 34/47 (72%), Positives = 43/47 (91%)
Frame = +1
Query: 67 KTKFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
+TKFSVL SLFNW+Q+SKTS +SKFR+FLDNFCKP++YF++IRLI
Sbjct: 5 ETKFSVLCSLFNWMQKSKTSTLKRSKFRRFLDNFCKPANYFSAIRLI 51
>ref|XP_010545385.1| PREDICTED: DNA ligase 4 isoform X2 [Tarenaya hassleriana]
Length = 1188
Score = 77.0 bits (188), Expect = 5e-12
Identities = 34/47 (72%), Positives = 42/47 (89%)
Frame = +1
Query: 67 KTKFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
+ KF+VL SLFNWIQ+SKTSA+ +SKFRKFLD +CKPSDYF ++RLI
Sbjct: 4 EVKFNVLVSLFNWIQKSKTSAQKRSKFRKFLDTYCKPSDYFAAVRLI 50
>ref|XP_010545384.1| PREDICTED: DNA ligase 4 isoform X1 [Tarenaya hassleriana]
Length = 1223
Score = 77.0 bits (188), Expect = 5e-12
Identities = 34/47 (72%), Positives = 42/47 (89%)
Frame = +1
Query: 67 KTKFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
+ KF+VL SLFNWIQ+SKTSA+ +SKFRKFLD +CKPSDYF ++RLI
Sbjct: 4 EVKFNVLVSLFNWIQKSKTSAQKRSKFRKFLDTYCKPSDYFAAVRLI 50
>ref|XP_002527709.1| DNA ligase IV, putative [Ricinus communis]
gi|223532899|gb|EEF34668.1| DNA ligase IV, putative
[Ricinus communis]
Length = 850
Score = 77.0 bits (188), Expect = 5e-12
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = +1
Query: 67 KTKFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
+TKFSV+ SLF WIQ+SK SAK +SKFRKFLD FCKP DYF++IRLI
Sbjct: 5 ETKFSVMVSLFEWIQKSKYSAKKRSKFRKFLDTFCKPDDYFSAIRLI 51
>dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana]
Length = 1184
Score = 76.3 bits (186), Expect = 9e-12
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = +1
Query: 73 KFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
KFSVL SLFNWIQ+SKTS++ +SKFRKFLD +CKPSDYF ++RLI
Sbjct: 6 KFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLI 50
>ref|XP_011017671.1| PREDICTED: DNA ligase 4 isoform X2 [Populus euphratica]
Length = 1197
Score = 76.3 bits (186), Expect = 9e-12
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +1
Query: 43 SSPKQCPPKTKFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
SS TKFS+L SLFNWI ++KTS++ +SKFRKF+D FC PSDYF+++RLI
Sbjct: 4 SSSSSSTEHTKFSILVSLFNWISKAKTSSRKRSKFRKFIDTFCSPSDYFSAVRLI 58
>ref|XP_011017670.1| PREDICTED: DNA ligase 4 isoform X1 [Populus euphratica]
Length = 1319
Score = 76.3 bits (186), Expect = 9e-12
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +1
Query: 43 SSPKQCPPKTKFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
SS TKFS+L SLFNWI ++KTS++ +SKFRKF+D FC PSDYF+++RLI
Sbjct: 4 SSSSSSTEHTKFSILVSLFNWISKAKTSSRKRSKFRKFIDTFCSPSDYFSAVRLI 58
>ref|XP_010443391.1| PREDICTED: DNA ligase 4-like [Camelina sativa]
Length = 314
Score = 76.3 bits (186), Expect = 9e-12
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = +1
Query: 73 KFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
KFSVL SLFNWIQ+SKTS++ +SKFRKFLD +CKPSDYF ++RLI
Sbjct: 6 KFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLI 50
>ref|XP_010451850.1| PREDICTED: DNA ligase 4 isoform X1 [Camelina sativa]
Length = 1225
Score = 76.3 bits (186), Expect = 9e-12
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = +1
Query: 73 KFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
KFSVL SLFNWIQ+SKTS++ +SKFRKFLD +CKPSDYF ++RLI
Sbjct: 6 KFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLI 50
>ref|XP_010046928.1| PREDICTED: DNA ligase 4 isoform X1 [Eucalyptus grandis]
Length = 1169
Score = 76.3 bits (186), Expect = 9e-12
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = +1
Query: 70 TKFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
TK SVL SLFNW+Q+SK++A+ +SKFRKFLD FCKPSDYF++IRLI
Sbjct: 5 TKLSVLVSLFNWMQKSKSAAQKRSKFRKFLDTFCKPSDYFSAIRLI 50
>ref|XP_008451172.1| PREDICTED: DNA ligase 4 isoform X2 [Cucumis melo]
Length = 1213
Score = 76.3 bits (186), Expect = 9e-12
Identities = 35/45 (77%), Positives = 41/45 (91%)
Frame = +1
Query: 73 KFSVLSSLFNWIQRSKTSAKMKSKFRKFLDNFCKPSDYFNSIRLI 207
KF+VLSSLF+WIQRSK+SAK +SKFRKFLD FC PS YF++IRLI
Sbjct: 6 KFAVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCSPSHYFSAIRLI 50