BLASTX nr result

ID: Cornus23_contig00038573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00038573
         (259 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008791058.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...    58   2e-06

>ref|XP_008791058.1| PREDICTED: E3 ubiquitin protein ligase DRIP2 [Phoenix dactylifera]
          Length = 191

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 31/64 (48%), Positives = 41/64 (64%)
 Frame = -2

Query: 219 SHLCSA*NIFSTVKLLGSAQCPNLRCLWVRRLIKGRTREPSLPQIPKSYLRIKDGRMAVG 40
           S L +   I + ++++   Q P     +V +  + + REP LPQIPKSYLRIKDGRM VG
Sbjct: 64  SPLVAGGEIRADIRVVSPPQRPQTGIWFVLQAAQNQGREPFLPQIPKSYLRIKDGRMTVG 123

Query: 39  LLMK 28
           LLMK
Sbjct: 124 LLMK 127


Top