BLASTX nr result
ID: Cornus23_contig00038474
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00038474
(252 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009352164.1| PREDICTED: putative E3 ubiquitin-protein lig... 86 8e-15
ref|XP_009352162.1| PREDICTED: putative E3 ubiquitin-protein lig... 86 8e-15
gb|KDO74932.1| hypothetical protein CISIN_1g002621mg [Citrus sin... 86 1e-14
gb|KDO74931.1| hypothetical protein CISIN_1g002621mg [Citrus sin... 86 1e-14
gb|KDO74929.1| hypothetical protein CISIN_1g002621mg [Citrus sin... 86 1e-14
ref|XP_006489216.1| PREDICTED: putative E3 ubiquitin-protein lig... 86 1e-14
ref|XP_006489214.1| PREDICTED: putative E3 ubiquitin-protein lig... 86 1e-14
ref|XP_006419748.1| hypothetical protein CICLE_v10004269mg [Citr... 86 1e-14
ref|XP_008390769.1| PREDICTED: putative E3 ubiquitin-protein lig... 79 1e-12
ref|XP_008390768.1| PREDICTED: putative E3 ubiquitin-protein lig... 79 1e-12
ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein lig... 79 1e-12
ref|XP_009762391.1| PREDICTED: putative E3 ubiquitin-protein lig... 78 3e-12
ref|XP_009762389.1| PREDICTED: putative E3 ubiquitin-protein lig... 78 3e-12
ref|XP_009762388.1| PREDICTED: putative E3 ubiquitin-protein lig... 78 3e-12
ref|XP_008223058.1| PREDICTED: putative E3 ubiquitin-protein lig... 78 3e-12
ref|XP_008223057.1| PREDICTED: putative E3 ubiquitin-protein lig... 78 3e-12
ref|XP_011071516.1| PREDICTED: putative E3 ubiquitin-protein lig... 75 1e-11
ref|XP_012482058.1| PREDICTED: putative E3 ubiquitin-protein lig... 75 2e-11
ref|XP_012482054.1| PREDICTED: putative E3 ubiquitin-protein lig... 75 2e-11
ref|XP_012069461.1| PREDICTED: putative E3 ubiquitin-protein lig... 75 2e-11
>ref|XP_009352164.1| PREDICTED: putative E3 ubiquitin-protein ligase RF4 isoform X2
[Pyrus x bretschneideri]
Length = 767
Score = 86.3 bits (212), Expect = 8e-15
Identities = 43/71 (60%), Positives = 53/71 (74%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPL+S +SDGA NG+ V Q QS+TE KSSEL+L NP K PS
Sbjct: 252 LLICDMNVSHACAMDGDPLNSFISDGASNGSSSVPNQPQSKTETKSSELNLLNPSKPVPS 311
Query: 71 IAWTHNFQSET 39
+ +H+ QSET
Sbjct: 312 VPGSHSSQSET 322
>ref|XP_009352162.1| PREDICTED: putative E3 ubiquitin-protein ligase RF4 isoform X1
[Pyrus x bretschneideri]
Length = 929
Score = 86.3 bits (212), Expect = 8e-15
Identities = 43/71 (60%), Positives = 53/71 (74%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPL+S +SDGA NG+ V Q QS+TE KSSEL+L NP K PS
Sbjct: 235 LLICDMNVSHACAMDGDPLNSFISDGASNGSSSVPNQPQSKTETKSSELNLLNPSKPVPS 294
Query: 71 IAWTHNFQSET 39
+ +H+ QSET
Sbjct: 295 VPGSHSSQSET 305
>gb|KDO74932.1| hypothetical protein CISIN_1g002621mg [Citrus sinensis]
Length = 726
Score = 85.5 bits (210), Expect = 1e-14
Identities = 44/80 (55%), Positives = 55/80 (68%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPLSS DGA NGN ++ QLQ++TE K SEL+L NP K PS
Sbjct: 234 LLICDMNVSHACAMDGDPLSSFSGDGASNGNSHITTQLQTKTEAKCSELNLPNPSKPVPS 293
Query: 71 IAWTHNFQSETLGTSMASIP 12
I +H+ Q E ++A IP
Sbjct: 294 IPCSHSSQPE--APTVAGIP 311
>gb|KDO74931.1| hypothetical protein CISIN_1g002621mg [Citrus sinensis]
Length = 753
Score = 85.5 bits (210), Expect = 1e-14
Identities = 44/80 (55%), Positives = 55/80 (68%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPLSS DGA NGN ++ QLQ++TE K SEL+L NP K PS
Sbjct: 234 LLICDMNVSHACAMDGDPLSSFSGDGASNGNSHITTQLQTKTEAKCSELNLPNPSKPVPS 293
Query: 71 IAWTHNFQSETLGTSMASIP 12
I +H+ Q E ++A IP
Sbjct: 294 IPCSHSSQPE--APTVAGIP 311
>gb|KDO74929.1| hypothetical protein CISIN_1g002621mg [Citrus sinensis]
gi|641856150|gb|KDO74930.1| hypothetical protein
CISIN_1g002621mg [Citrus sinensis]
Length = 899
Score = 85.5 bits (210), Expect = 1e-14
Identities = 44/80 (55%), Positives = 55/80 (68%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPLSS DGA NGN ++ QLQ++TE K SEL+L NP K PS
Sbjct: 234 LLICDMNVSHACAMDGDPLSSFSGDGASNGNSHITTQLQTKTEAKCSELNLPNPSKPVPS 293
Query: 71 IAWTHNFQSETLGTSMASIP 12
I +H+ Q E ++A IP
Sbjct: 294 IPCSHSSQPE--APTVAGIP 311
>ref|XP_006489216.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like isoform
X3 [Citrus sinensis]
Length = 719
Score = 85.5 bits (210), Expect = 1e-14
Identities = 44/80 (55%), Positives = 55/80 (68%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPLSS DGA NGN ++ QLQ++TE K SEL+L NP K PS
Sbjct: 234 LLICDMNVSHACAMDGDPLSSFSGDGASNGNSHITTQLQTKTEAKCSELNLPNPSKPVPS 293
Query: 71 IAWTHNFQSETLGTSMASIP 12
I +H+ Q E ++A IP
Sbjct: 294 IPCSHSSQPE--APTVAGIP 311
>ref|XP_006489214.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like isoform
X1 [Citrus sinensis] gi|568872108|ref|XP_006489215.1|
PREDICTED: putative E3 ubiquitin-protein ligase
RF298-like isoform X2 [Citrus sinensis]
Length = 899
Score = 85.5 bits (210), Expect = 1e-14
Identities = 44/80 (55%), Positives = 55/80 (68%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPLSS DGA NGN ++ QLQ++TE K SEL+L NP K PS
Sbjct: 234 LLICDMNVSHACAMDGDPLSSFSGDGASNGNSHITTQLQTKTEAKCSELNLPNPSKPVPS 293
Query: 71 IAWTHNFQSETLGTSMASIP 12
I +H+ Q E ++A IP
Sbjct: 294 IPCSHSSQPE--APTVAGIP 311
>ref|XP_006419748.1| hypothetical protein CICLE_v10004269mg [Citrus clementina]
gi|567853171|ref|XP_006419749.1| hypothetical protein
CICLE_v10004269mg [Citrus clementina]
gi|567853173|ref|XP_006419750.1| hypothetical protein
CICLE_v10004269mg [Citrus clementina]
gi|557521621|gb|ESR32988.1| hypothetical protein
CICLE_v10004269mg [Citrus clementina]
gi|557521622|gb|ESR32989.1| hypothetical protein
CICLE_v10004269mg [Citrus clementina]
gi|557521623|gb|ESR32990.1| hypothetical protein
CICLE_v10004269mg [Citrus clementina]
Length = 900
Score = 85.5 bits (210), Expect = 1e-14
Identities = 44/80 (55%), Positives = 55/80 (68%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPLSS DGA NGN ++ QLQ++TE K SEL+L NP K PS
Sbjct: 235 LLICDMNVSHACAMDGDPLSSFSGDGASNGNSHITTQLQTKTEAKCSELNLPNPSKPVPS 294
Query: 71 IAWTHNFQSETLGTSMASIP 12
I +H+ Q E ++A IP
Sbjct: 295 IPCSHSSQPE--APTVAGIP 312
>ref|XP_008390769.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X2
[Malus domestica]
Length = 747
Score = 79.3 bits (194), Expect = 1e-12
Identities = 42/71 (59%), Positives = 51/71 (71%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPL+S +SDGA NG+ V Q QS+TE KSSEL+L NP K P
Sbjct: 235 LLICDMNVSHACAMDGDPLNSFISDGASNGSSSVPNQPQSKTETKSSELNLLNPSKPVPG 294
Query: 71 IAWTHNFQSET 39
+H+ QSET
Sbjct: 295 ---SHSSQSET 302
>ref|XP_008390768.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X1
[Malus domestica]
Length = 926
Score = 79.3 bits (194), Expect = 1e-12
Identities = 42/71 (59%), Positives = 51/71 (71%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPL+S +SDGA NG+ V Q QS+TE KSSEL+L NP K P
Sbjct: 235 LLICDMNVSHACAMDGDPLNSFISDGASNGSSSVPNQPQSKTETKSSELNLLNPSKPVPG 294
Query: 71 IAWTHNFQSET 39
+H+ QSET
Sbjct: 295 ---SHSSQSET 302
>ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Vitis
vinifera] gi|731389002|ref|XP_010649830.1| PREDICTED:
putative E3 ubiquitin-protein ligase RF298 [Vitis
vinifera]
Length = 893
Score = 79.3 bits (194), Expect = 1e-12
Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLS-DGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNP 75
LL+CDMN+ ACAMD D SS++S DGA NG+ S Q QS+TE KSSEL+L NPC
Sbjct: 234 LLICDMNVSHACAMDGDSFSSIVSGDGASNGSSSTSGQPQSKTEAKSSELNLPNPCNPVH 293
Query: 74 SIAWTHNFQSET 39
SI H+ QSET
Sbjct: 294 SIPCAHSSQSET 305
>ref|XP_009762391.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X3
[Nicotiana sylvestris]
Length = 729
Score = 77.8 bits (190), Expect = 3e-12
Identities = 43/83 (51%), Positives = 57/83 (68%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAM+SDPLSS+++DG N + V LQS E KSSE + + PCK NPS
Sbjct: 237 LLICDMNVSHACAMESDPLSSLVADGNENSSASVQPYLQS--EAKSSESNNRIPCKTNPS 294
Query: 71 IAWTHNFQSETLGTSMASIPCAH 3
+A H SET +++AS+ C H
Sbjct: 295 VACAH-CSSET--SNVASVTCGH 314
>ref|XP_009762389.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X2
[Nicotiana sylvestris]
Length = 755
Score = 77.8 bits (190), Expect = 3e-12
Identities = 43/83 (51%), Positives = 57/83 (68%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAM+SDPLSS+++DG N + V LQS E KSSE + + PCK NPS
Sbjct: 237 LLICDMNVSHACAMESDPLSSLVADGNENSSASVQPYLQS--EAKSSESNNRIPCKTNPS 294
Query: 71 IAWTHNFQSETLGTSMASIPCAH 3
+A H SET +++AS+ C H
Sbjct: 295 VACAH-CSSET--SNVASVTCGH 314
>ref|XP_009762388.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X1
[Nicotiana sylvestris]
Length = 903
Score = 77.8 bits (190), Expect = 3e-12
Identities = 43/83 (51%), Positives = 57/83 (68%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAM+SDPLSS+++DG N + V LQS E KSSE + + PCK NPS
Sbjct: 237 LLICDMNVSHACAMESDPLSSLVADGNENSSASVQPYLQS--EAKSSESNNRIPCKTNPS 294
Query: 71 IAWTHNFQSETLGTSMASIPCAH 3
+A H SET +++AS+ C H
Sbjct: 295 VACAH-CSSET--SNVASVTCGH 314
>ref|XP_008223058.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X2
[Prunus mume]
Length = 785
Score = 77.8 bits (190), Expect = 3e-12
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPL+S +SDGA NG+ V Q QS+ E KS EL+L +P K PS
Sbjct: 235 LLICDMNVSHACAMDGDPLNSFMSDGASNGSSSVPNQPQSKIEAKSVELNLLSPSKPVPS 294
Query: 71 IAWTHNFQSET 39
I +H+ Q ET
Sbjct: 295 IPGSHSSQYET 305
>ref|XP_008223057.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X1
[Prunus mume]
Length = 930
Score = 77.8 bits (190), Expect = 3e-12
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPL+S +SDGA NG+ V Q QS+ E KS EL+L +P K PS
Sbjct: 235 LLICDMNVSHACAMDGDPLNSFMSDGASNGSSSVPNQPQSKIEAKSVELNLLSPSKPVPS 294
Query: 71 IAWTHNFQSET 39
I +H+ Q ET
Sbjct: 295 IPGSHSSQYET 305
>ref|XP_011071516.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Sesamum
indicum]
Length = 899
Score = 75.5 bits (184), Expect = 1e-11
Identities = 35/63 (55%), Positives = 44/63 (69%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD+DPL S D NGN +SAQ Q RTEP+S E ++ PCK N S
Sbjct: 236 LLICDMNVSHACAMDTDPLGSCTGDATSNGNSSISAQPQLRTEPRSLESNISVPCKPNAS 295
Query: 71 IAW 63
+A+
Sbjct: 296 VAY 298
>ref|XP_012482058.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X2
[Gossypium raimondii]
Length = 745
Score = 74.7 bits (182), Expect = 2e-11
Identities = 37/78 (47%), Positives = 48/78 (61%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPLS DG NG F S Q Q + E K+SEL+L NPC+ PS
Sbjct: 234 LLICDMNVSHACAMDGDPLSGFAGDGGSNGISFSSNQPQLKPEAKTSELNLPNPCRPVPS 293
Query: 71 IAWTHNFQSETLGTSMAS 18
+H+ E T +++
Sbjct: 294 FPCSHSSPPEVPSTGISN 311
>ref|XP_012482054.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X1
[Gossypium raimondii] gi|823164216|ref|XP_012482055.1|
PREDICTED: putative E3 ubiquitin-protein ligase RF298
isoform X1 [Gossypium raimondii]
gi|823164218|ref|XP_012482056.1| PREDICTED: putative E3
ubiquitin-protein ligase RF298 isoform X1 [Gossypium
raimondii] gi|763761312|gb|KJB28566.1| hypothetical
protein B456_005G056100 [Gossypium raimondii]
gi|763761313|gb|KJB28567.1| hypothetical protein
B456_005G056100 [Gossypium raimondii]
gi|763761314|gb|KJB28568.1| hypothetical protein
B456_005G056100 [Gossypium raimondii]
Length = 889
Score = 74.7 bits (182), Expect = 2e-11
Identities = 37/78 (47%), Positives = 48/78 (61%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPLS DG NG F S Q Q + E K+SEL+L NPC+ PS
Sbjct: 234 LLICDMNVSHACAMDGDPLSGFAGDGGSNGISFSSNQPQLKPEAKTSELNLPNPCRPVPS 293
Query: 71 IAWTHNFQSETLGTSMAS 18
+H+ E T +++
Sbjct: 294 FPCSHSSPPEVPSTGISN 311
>ref|XP_012069461.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Jatropha
curcas] gi|802578553|ref|XP_012069462.1| PREDICTED:
putative E3 ubiquitin-protein ligase RF298 [Jatropha
curcas] gi|643733115|gb|KDP40062.1| hypothetical protein
JCGZ_02060 [Jatropha curcas]
Length = 898
Score = 74.7 bits (182), Expect = 2e-11
Identities = 37/70 (52%), Positives = 45/70 (64%)
Frame = -2
Query: 251 LLVCDMNLLQACAMDSDPLSSVLSDGAPNGNIFVSAQLQSRTEPKSSELDLQNPCKLNPS 72
LL+CDMN+ ACAMD DPLS SDGA G V Q Q + E K +EL L NP K PS
Sbjct: 236 LLICDMNVSHACAMDGDPLSGFSSDGALTGASSVPIQPQMKAEAKCTELSLPNPSKSEPS 295
Query: 71 IAWTHNFQSE 42
++ +HN QS+
Sbjct: 296 VSCSHNSQSD 305