BLASTX nr result
ID: Cornus23_contig00038462
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00038462
(376 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avel... 92 2e-16
emb|CDP02801.1| unnamed protein product [Coffea canephora] 84 5e-14
gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antir... 80 6e-13
gb|AEI53622.1| chloroplast geranylgeranyl diphosphate synthase [... 78 3e-12
gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebau... 77 4e-12
gb|AIK21792.1| geranylgeranyl diphosphate synthase [Panax notogi... 77 7e-12
gb|AGL91645.1| geranyl diphosphate synthase large subunit [Catha... 77 7e-12
dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton su... 76 9e-12
ref|XP_008352478.1| PREDICTED: LOW QUALITY PROTEIN: geranylgeran... 76 9e-12
ref|XP_011097207.1| PREDICTED: geranylgeranyl pyrophosphate synt... 76 1e-11
ref|XP_007047029.1| Geranylgeranyl pyrophosphate synthase 1 [The... 76 1e-11
dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasi... 76 1e-11
sp|Q42698.1|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophospha... 75 1e-11
ref|XP_012489147.1| PREDICTED: geranylgeranyl pyrophosphate synt... 75 2e-11
ref|XP_008241623.1| PREDICTED: geranylgeranyl pyrophosphate synt... 75 2e-11
sp|Q94ID7.1|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophospha... 74 3e-11
gb|AFJ52722.1| geranyl diphosphate synthase [Mangifera indica] 73 7e-11
ref|XP_007204376.1| hypothetical protein PRUPE_ppa007368mg [Prun... 73 9e-11
gb|AHI88418.1| geranylgeranyl diphosphate synthase [Citrullus la... 72 1e-10
gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humul... 72 1e-10
>gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
Length = 373
Score = 91.7 bits (226), Expect = 2e-16
Identities = 56/120 (46%), Positives = 79/120 (65%), Gaps = 7/120 (5%)
Frame = -2
Query: 339 LKSCSLLESFNREPESTSTTSVFIQSVKNKPISLFFPSPRTRSISFISLSVSAILTKERT 160
+++CS+ R ++ + + +KN PIS F P R RSIS S+SVSA+LTKE T
Sbjct: 10 VQTCSMFNQAGRSRSMSTPSFQILHPLKNIPIS-FIPPKRRRSIS--SVSVSAVLTKEDT 66
Query: 159 VNDEDENQQTHLQSPSISFDFKAYMLQKANS-------AVSLQEPLKIHESMQYSLLAGG 1
+ +E+E++ S + +F+FK YMLQKANS AVSL++P KIHE+M+YSLLAGG
Sbjct: 67 LREEEESE-----SEARTFNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAGG 121
>emb|CDP02801.1| unnamed protein product [Coffea canephora]
Length = 386
Score = 83.6 bits (205), Expect = 5e-14
Identities = 52/108 (48%), Positives = 71/108 (65%), Gaps = 12/108 (11%)
Frame = -2
Query: 288 STTSVFIQSVKNK-PISLFFPSPRTRS-ISFISLSVSAILTKERTVNDEDENQQTHLQS- 118
S S +KNK P S+F P+P ++ I F S S++AILTKE+T ++E+ ++ +
Sbjct: 27 SANSYLYHPLKNKLPFSIFLPNPIIKTAIPFSSFSIAAILTKEKTSAPQEESSKSKEEQI 86
Query: 117 --PSISFDFKAYMLQKANS-------AVSLQEPLKIHESMQYSLLAGG 1
SFDFKAY+LQKA+S AV L++PLKIHESM+YSLLAGG
Sbjct: 87 FPTPPSFDFKAYVLQKADSVNKALEEAVLLRDPLKIHESMRYSLLAGG 134
>gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus]
Length = 372
Score = 80.1 bits (196), Expect = 6e-13
Identities = 47/110 (42%), Positives = 72/110 (65%), Gaps = 7/110 (6%)
Frame = -2
Query: 309 NREPESTSTTSVFIQSVKNKPISLFFPSPRTRSISFISLSVSAILTKERTVNDEDENQQT 130
++ P++ TT+ + ISLF +P+++S + + S+S+ILTK N ++ +Q+T
Sbjct: 16 SKSPKNVQTTTRSRSIILPHKISLFPSNPKSKSKTHLRFSISSILTK----NPQESSQKT 71
Query: 129 HLQSPSISFDFKAYMLQKANS-------AVSLQEPLKIHESMQYSLLAGG 1
+ P+ + DFK YML+KA+S AV L+EPLKIHESM+YSLLAGG
Sbjct: 72 S-KDPTFTLDFKTYMLEKASSVNKALEQAVLLKEPLKIHESMRYSLLAGG 120
>gb|AEI53622.1| chloroplast geranylgeranyl diphosphate synthase [Catharanthus
roseus]
Length = 383
Score = 77.8 bits (190), Expect = 3e-12
Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 10/108 (9%)
Frame = -2
Query: 294 STSTTSVFIQSVKNK-PISLFFPSPRTRSISFIS-LSVSAILTKERTVNDEDENQQTHLQ 121
S+S S +KN+ PIS F + I S LS+SAI+TKE+T + + + +
Sbjct: 24 SSSMRSNLCHPLKNQLPISFFLSGTIRKPIFSCSRLSISAIITKEQTQEESESKSKKEVA 83
Query: 120 -SPSISFDFKAYMLQKANS-------AVSLQEPLKIHESMQYSLLAGG 1
S S SFDFKAYM+ KANS AV ++EPLKIHESM+YSLLAGG
Sbjct: 84 FSSSSSFDFKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGG 131
>gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 361
Score = 77.4 bits (189), Expect = 4e-12
Identities = 46/100 (46%), Positives = 67/100 (67%), Gaps = 12/100 (12%)
Frame = -2
Query: 264 SVKNKPISLFFPSPRTRSISFISL----SVSAILTKERTVN-DEDENQQTHLQSPSISFD 100
S++ +P +L P+ + R +S SL SVSAILT++ N E+ N QTHL++P F+
Sbjct: 14 SIRTRPTNLLNPTQKLRPVSSSSLPSFSSVSAILTEKHQSNPSENNNLQTHLETP---FN 70
Query: 99 FKAYMLQKAN-------SAVSLQEPLKIHESMQYSLLAGG 1
F +YML+K N ++V L++P+KIHESM+YSLLAGG
Sbjct: 71 FDSYMLEKVNMVNEALDASVPLKDPIKIHESMRYSLLAGG 110
>gb|AIK21792.1| geranylgeranyl diphosphate synthase [Panax notoginseng]
Length = 368
Score = 76.6 bits (187), Expect = 7e-12
Identities = 51/98 (52%), Positives = 61/98 (62%), Gaps = 8/98 (8%)
Frame = -2
Query: 270 IQSVKNKPISL-FFPSPRTRSISFISLSVSAILTKERTVNDEDENQQTHLQSPSISFDFK 94
+ +K P+SL FFP+P S SLSVS+ILTKE HL S S +F+FK
Sbjct: 31 LHKLKQNPLSLLFFPTPIHTQSS--SLSVSSILTKE----------SQHLHSSSPTFNFK 78
Query: 93 AYMLQKANS-------AVSLQEPLKIHESMQYSLLAGG 1
+Y+LQKANS AV LQ P KIHESM+YSLLAGG
Sbjct: 79 SYILQKANSVNDALNAAVILQNPAKIHESMRYSLLAGG 116
>gb|AGL91645.1| geranyl diphosphate synthase large subunit [Catharanthus roseus]
Length = 383
Score = 76.6 bits (187), Expect = 7e-12
Identities = 51/108 (47%), Positives = 67/108 (62%), Gaps = 10/108 (9%)
Frame = -2
Query: 294 STSTTSVFIQSVKNK-PISLFFPSPRTRSISFIS-LSVSAILTKERTVNDEDENQQTHLQ 121
S+S S +KN+ PIS F + I S LS+SAI+TKE+T + + + +
Sbjct: 24 SSSMRSNLCHPLKNQLPISFFLSGTIRKPIFSCSRLSISAIITKEQTQEESESKSKKEVA 83
Query: 120 -SPSISFDFKAYMLQKANS-------AVSLQEPLKIHESMQYSLLAGG 1
S + SFDFKAYM+ KANS AV ++EPLKIHESM+YSLLAGG
Sbjct: 84 FSSTSSFDFKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGG 131
>dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
Length = 368
Score = 76.3 bits (186), Expect = 9e-12
Identities = 52/113 (46%), Positives = 74/113 (65%), Gaps = 18/113 (15%)
Frame = -2
Query: 285 TTSVFIQSV----KNKPIS-------LFFPSPRTRSISFISLSVSAILTKERTVNDEDEN 139
T+SV Q+ K+KP+S LF+ + + RS+S+ VSAI+TK+ E++N
Sbjct: 12 TSSVISQATRSRSKSKPLSFSPVSIPLFYRNSK-RSVSY----VSAIVTKDEETIQEEQN 66
Query: 138 QQTHLQSPSISFDFKAYMLQKANS-------AVSLQEPLKIHESMQYSLLAGG 1
+ + S S+ FDFK+YM+QKA++ AVSL+EPLKIHESM+YSLLAGG
Sbjct: 67 KNS---SSSLGFDFKSYMVQKASAINQALEAAVSLREPLKIHESMRYSLLAGG 116
>ref|XP_008352478.1| PREDICTED: LOW QUALITY PROTEIN: geranylgeranyl pyrophosphate
synthase, chloroplastic-like [Malus domestica]
Length = 374
Score = 76.3 bits (186), Expect = 9e-12
Identities = 50/119 (42%), Positives = 72/119 (60%), Gaps = 7/119 (5%)
Frame = -2
Query: 336 KSCSLLESFNREPESTSTTSVFIQSVKNKPISLFFPSPRTRSISFISLSVSAILTKERTV 157
++CS+L R S+ + ++F N PIS P R + F +VSA+LTK+ +
Sbjct: 13 QTCSMLNQAGRS-RSSQSFNLFHPLKTNIPISXAAPHRRRPASPF---AVSAVLTKQEIL 68
Query: 156 NDEDENQQTHLQSPSISFDFKAYMLQKA-------NSAVSLQEPLKIHESMQYSLLAGG 1
+E E + SP +F+FK+YMLQKA ++AVSL+EP+ IHE+MQYSLLAGG
Sbjct: 69 TEEFEEE-----SPKPTFNFKSYMLQKAEAVNQALDAAVSLREPITIHEAMQYSLLAGG 122
>ref|XP_011097207.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Sesamum indicum]
Length = 375
Score = 75.9 bits (185), Expect = 1e-11
Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 7/92 (7%)
Frame = -2
Query: 255 NKPISLFFPSPRTRSISFISLSVSAILTKERTVNDEDENQQTHLQSPSISFDFKAYMLQK 76
N P+S F P + +SF SL+VSA+L KE + +++ + + +FDFK YML K
Sbjct: 39 NLPVSFCFSDPTRKPVSFSSLTVSAVLVKE-------QKEESKIIEKAPTFDFKNYMLGK 91
Query: 75 ANS-------AVSLQEPLKIHESMQYSLLAGG 1
A+S A+ L+EPLKIHESM+YSLLAGG
Sbjct: 92 ASSVNKALEEAILLREPLKIHESMRYSLLAGG 123
>ref|XP_007047029.1| Geranylgeranyl pyrophosphate synthase 1 [Theobroma cacao]
gi|508699290|gb|EOX91186.1| Geranylgeranyl pyrophosphate
synthase 1 [Theobroma cacao]
Length = 370
Score = 75.9 bits (185), Expect = 1e-11
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 19/112 (16%)
Frame = -2
Query: 279 SVFIQSVKNKPISL--FFP----------SPRTRSISFISLSVSAILTKERTVNDEDENQ 136
S+F Q+ ++K I L FP +P+ RS++ + S+SA+LTKE T+ +E+++
Sbjct: 14 SIFNQASRSKSIPLPRSFPFNPLKNLSSSTPKKRSLTSLP-SISAVLTKEDTIKEEEQDP 72
Query: 135 QTHLQSPSISFDFKAYMLQKAN-------SAVSLQEPLKIHESMQYSLLAGG 1
Q SFDFK+YM+QKA+ SAVSL++P+KIHE+M+YSLLAGG
Sbjct: 73 QKP------SFDFKSYMVQKASTVNQALDSAVSLRDPVKIHEAMRYSLLAGG 118
>dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 75.9 bits (185), Expect = 1e-11
Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 14/100 (14%)
Frame = -2
Query: 258 KNKPISLFFPSPRTRSISFISL-------SVSAILTKERTVNDEDENQQTHLQSPSISFD 100
K+K SL F ++ +ISF SVSAI+TKE E++N +P SFD
Sbjct: 25 KSKSFSLPFNPLKSLAISFAYRKSERPISSVSAIITKEEETLQEEQN------NPPPSFD 78
Query: 99 FKAYMLQKANS-------AVSLQEPLKIHESMQYSLLAGG 1
FK+YMLQKANS A+ LQEP KIHESM+YSLLAGG
Sbjct: 79 FKSYMLQKANSINQALEAAIPLQEPAKIHESMRYSLLAGG 118
>sp|Q42698.1|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate
synthase [Catharanthus roseus]
Length = 357
Score = 75.5 bits (184), Expect = 1e-11
Identities = 49/97 (50%), Positives = 63/97 (64%), Gaps = 10/97 (10%)
Frame = -2
Query: 261 VKNK-PISLFFPSPRTRSISFIS-LSVSAILTKERTVNDEDENQQTHLQ-SPSISFDFKA 91
+KN+ PIS F + I S LS+SAI+TKE+T + + + + S S SFDFKA
Sbjct: 9 LKNQLPISFFLSGTIRKPIFSCSRLSISAIITKEQTQEESESKSKKEVAFSSSSSFDFKA 68
Query: 90 YMLQKANS-------AVSLQEPLKIHESMQYSLLAGG 1
YM+ KANS AV ++EPLKIHESM+YSLLAGG
Sbjct: 69 YMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGG 105
>ref|XP_012489147.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Gossypium raimondii]
gi|763773089|gb|KJB40212.1| hypothetical protein
B456_007G051300 [Gossypium raimondii]
Length = 372
Score = 74.7 bits (182), Expect = 2e-11
Identities = 52/123 (42%), Positives = 78/123 (63%), Gaps = 9/123 (7%)
Frame = -2
Query: 342 SLKSCSLLESFNR-EPESTSTTSVFIQSVKNKPI-SLFFPSPRTRSISFISLSVSAILTK 169
S+ CS ++S++ S S S+ +S+ P+ +L + +TR + I S+ +++TK
Sbjct: 3 SVNLCSWVQSYSIFNQASRSKYSLLPRSLPFNPLMNLSSSTSKTRGFASIP-SICSVITK 61
Query: 168 ERTVNDEDENQQTHLQSPSISFDFKAYMLQKA-------NSAVSLQEPLKIHESMQYSLL 10
V +E+E QQ Q+PS FDFK YM+QKA +SAVSL+EP+KIHE+M+YSLL
Sbjct: 62 GDAVKEEEEQQQP--QNPS--FDFKTYMVQKATMINQALDSAVSLREPVKIHEAMRYSLL 117
Query: 9 AGG 1
AGG
Sbjct: 118 AGG 120
>ref|XP_008241623.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Prunus mume]
Length = 369
Score = 74.7 bits (182), Expect = 2e-11
Identities = 53/121 (43%), Positives = 73/121 (60%), Gaps = 8/121 (6%)
Frame = -2
Query: 339 LKSCSLLESFNREPESTSTTSVFIQSVK-NKPISLFFPSPRTRSISFISLSVSAILTKER 163
+++CS+ FN+ S S T + +K N P+S F P R RS S SVSAILTK++
Sbjct: 11 IQTCSM---FNQAGRSRSQTFSLVHPLKTNMPVS-FAPPKRRRSTS--PFSVSAILTKQQ 64
Query: 162 TVNDEDENQQTHLQSPSISFDFKAYMLQKAN-------SAVSLQEPLKIHESMQYSLLAG 4
T+ DE+ S SF+FK+YMLQ A+ +AV L++P IHE+M+YSLLAG
Sbjct: 65 TLKDEE--------SAKPSFNFKSYMLQTADLVNQALDAAVPLRDPAMIHEAMRYSLLAG 116
Query: 3 G 1
G
Sbjct: 117 G 117
>sp|Q94ID7.1|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate
synthase [Hevea brasiliensis]
Length = 370
Score = 74.3 bits (181), Expect = 3e-11
Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 14/100 (14%)
Frame = -2
Query: 258 KNKPISLFFPSPRTRSISFISL-------SVSAILTKERTVNDEDENQQTHLQSPSISFD 100
K+K SL F ++ +ISF SVSAI+TKE E++N +P SFD
Sbjct: 25 KSKSFSLPFNPLKSLAISFAYRKSERPISSVSAIITKEEETLQEEQN------NPPPSFD 78
Query: 99 FKAYMLQKANS-------AVSLQEPLKIHESMQYSLLAGG 1
FK+YMLQK NS A+ LQEP KIHESM+YSLLAGG
Sbjct: 79 FKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGG 118
>gb|AFJ52722.1| geranyl diphosphate synthase [Mangifera indica]
Length = 328
Score = 73.2 bits (178), Expect = 7e-11
Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 7/73 (9%)
Frame = -2
Query: 198 SLSVSAILTKERTVNDEDENQQTHLQSPSISFDFKAYMLQKANSA-------VSLQEPLK 40
SLSVSA+LTKE T+ +E+E+ P FDFK+YMLQK NS VS++EP K
Sbjct: 11 SLSVSAVLTKEETLREEEED-------PKPVFDFKSYMLQKGNSVNQALDAVVSIREPKK 63
Query: 39 IHESMQYSLLAGG 1
IHE+M+YSLLAGG
Sbjct: 64 IHEAMRYSLLAGG 76
>ref|XP_007204376.1| hypothetical protein PRUPE_ppa007368mg [Prunus persica]
gi|462399907|gb|EMJ05575.1| hypothetical protein
PRUPE_ppa007368mg [Prunus persica]
Length = 370
Score = 72.8 bits (177), Expect = 9e-11
Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 8/121 (6%)
Frame = -2
Query: 339 LKSCSLLESFNREPESTSTTSVFIQSVK-NKPISLFFPSPRTRSISFISLSVSAILTKER 163
+++CS+ FN+ S S + + +K N P+S F P R RS S SVSAILTK++
Sbjct: 12 IQTCSM---FNQAGRSRSQSFSLVHPLKTNMPVS-FAPPKRRRSTS--PFSVSAILTKQQ 65
Query: 162 TVNDEDENQQTHLQSPSISFDFKAYMLQKANS-------AVSLQEPLKIHESMQYSLLAG 4
T+ +E+ S SF+FK+YMLQ A+S AV L++P IHE+M+YSLLAG
Sbjct: 66 TLKEEE--------SAKPSFNFKSYMLQTADSVNQALDAAVPLRDPAMIHEAMRYSLLAG 117
Query: 3 G 1
G
Sbjct: 118 G 118
>gb|AHI88418.1| geranylgeranyl diphosphate synthase [Citrullus lanatus]
Length = 363
Score = 72.4 bits (176), Expect = 1e-10
Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 14/112 (12%)
Frame = -2
Query: 294 STSTTSVFIQSVKNKPI-------SLFFPSPRTRSISFISLSVSAILTKERTVNDEDENQ 136
S + S+F Q+ ++ S P PR S S SLS+ A+L KE T+ +E+
Sbjct: 9 SFQSCSIFTQACRSSSFPLKRGFKSFVIPKPRLPSSSISSLSICAVLAKEETLTEEEGKP 68
Query: 135 QTHLQSPSISFDFKAYMLQKANS-------AVSLQEPLKIHESMQYSLLAGG 1
+F+FK YM+QK NS AV L+EPLKIHE+M+YSL+AGG
Sbjct: 69 ---------TFNFKEYMIQKGNSVNHALDAAVFLREPLKIHEAMRYSLMAGG 111
>gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
Length = 369
Score = 72.4 bits (176), Expect = 1e-10
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 7/120 (5%)
Frame = -2
Query: 339 LKSCSLLESFNREPESTSTTSVFIQSVKNKPISLFFPSPRTRSISFISLSVSAILTKERT 160
+++CS+ FN+ S S+T + K + F +P+ R + S+SA+LT++
Sbjct: 9 VQTCSM---FNQAGRSRSSTFNLLHYHPLKKVPFSFQTPKQRRPTSSFSSISAVLTEQEA 65
Query: 159 VNDEDENQQTHLQSPSISFDFKAYMLQKANS-------AVSLQEPLKIHESMQYSLLAGG 1
V +++E + T F+FK+YM+QKANS AV L+EP IHE+M+YSLLAGG
Sbjct: 66 VTEDEEQKST--------FNFKSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSLLAGG 117