BLASTX nr result

ID: Cornus23_contig00038294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00038294
         (320 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP01797.1| unnamed protein product [Coffea canephora]             49   7e-09
ref|XP_002273131.3| PREDICTED: rab proteins geranylgeranyltransf...    51   7e-07

>emb|CDP01797.1| unnamed protein product [Coffea canephora]
          Length = 329

 Score = 48.5 bits (114), Expect(2) = 7e-09
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -2

Query: 283 IP*IIGIYRLQTLASIPTLANDLEVIFHLGFRTENGEPSQISPEK 149
           IP  + I R   LASIP+L+NDLE+IF LG + E G+PS++ PE+
Sbjct: 101 IPEDLSITRNPKLASIPSLSNDLEMIFKLGHKIECGDPSKVLPEE 145



 Score = 38.1 bits (87), Expect(2) = 7e-09
 Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
 Frame = -1

Query: 125 GFQLRSSQHVFPLDLN-LPYPESENEESDQSTSGTLEKKKNR 3
           G   + +QHV  LDLN LP   S+NEE++Q+ +G +EKK+ R
Sbjct: 154 GHLTQRAQHVPVLDLNSLPCSGSDNEENNQNAAGVVEKKQKR 195


>ref|XP_002273131.3| PREDICTED: rab proteins geranylgeranyltransferase component A 1
           [Vitis vinifera]
          Length = 881

 Score = 51.2 bits (121), Expect(2) = 7e-07
 Identities = 26/47 (55%), Positives = 33/47 (70%)
 Frame = -2

Query: 286 QIP*IIGIYRLQTLASIPTLANDLEVIFHLGFRTENGEPSQISPEKL 146
           +IP I+ I R   LASIP LANDL++IF LG R EN EPS +  E++
Sbjct: 658 RIPPILMISRNPKLASIPALANDLQIIFELGCRLENKEPSHVPSEEI 704



 Score = 28.5 bits (62), Expect(2) = 7e-07
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
 Frame = -1

Query: 113 RSSQHVFPLDLNLP-----YPE-SENEESDQSTSGTLEKKK 9
           +S + +F  DLN P      PE SEN+E+D+   G + KKK
Sbjct: 712 QSKRTLFMFDLNCPPCLVATPETSENQENDKEAPGIIMKKK 752


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