BLASTX nr result
ID: Cornus23_contig00038221
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00038221
(334 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 56 4e-17
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 56 6e-17
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 56 6e-17
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 56 8e-17
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 56 1e-16
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 57 2e-16
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 57 2e-16
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 56 2e-16
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 56 2e-16
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 56 3e-16
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 55 4e-16
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 55 4e-16
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 54 6e-16
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 55 6e-16
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 55 8e-16
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 55 1e-15
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 55 3e-15
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 55 3e-15
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 55 2e-14
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 48 2e-14
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 55.8 bits (133), Expect(3) = 4e-17
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP++ S GG RYMMT++ D+S+KVW +
Sbjct: 428 EGILDYVHSDLWGPARKRSFGGARYMMTIVDDYSRKVWPYF 468
Score = 44.3 bits (103), Expect(3) = 4e-17
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK EAF++FK+WKT+VE+QT
Sbjct: 460 YSRKVWPYFLKHKFEAFLVFKEWKTMVERQT 490
Score = 34.3 bits (77), Expect(3) = 4e-17
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++GLL GQ K FCE
Sbjct: 380 GHMSEIGLAELSKRGLLDGQNIGKLKFCE 408
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 56.2 bits (134), Expect(3) = 6e-17
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP++ S GG RYMMT++ D+S+KVW +
Sbjct: 504 EGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYF 544
Score = 42.0 bits (97), Expect(3) = 6e-17
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 536 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 566
Score = 35.4 bits (80), Expect(3) = 6e-17
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++GLL GQ +K FCE
Sbjct: 456 GHMSEIGLAELSKRGLLDGQSIKKLKFCE 484
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 56.2 bits (134), Expect(3) = 6e-17
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP++ S GG RYMMT++ D+S+KVW +
Sbjct: 450 EGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYF 490
Score = 42.0 bits (97), Expect(3) = 6e-17
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 482 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 512
Score = 35.4 bits (80), Expect(3) = 6e-17
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++GLL GQ +K FCE
Sbjct: 402 GHMSEIGLAELSKRGLLDGQSIKKLKFCE 430
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 56.2 bits (134), Expect(3) = 8e-17
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP++ S GG RYMMT++ D+S+KVW +
Sbjct: 489 EGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYF 529
Score = 42.0 bits (97), Expect(3) = 8e-17
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 521 YSRKVWPYFLKHKYQAFNVFKEWKTMVERQT 551
Score = 35.0 bits (79), Expect(3) = 8e-17
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++GLL GQ K FCE
Sbjct: 441 GHMSEIGLAELSKRGLLDGQSISKLKFCE 469
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 56.2 bits (134), Expect(3) = 1e-16
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP++ S GG RYMMT++ D+S+KVW +
Sbjct: 398 EGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYF 438
Score = 42.0 bits (97), Expect(3) = 1e-16
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 430 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 460
Score = 34.3 bits (77), Expect(3) = 1e-16
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++GLL GQ K FCE
Sbjct: 350 GHMSEIGLAELSKRGLLDGQSIGKLKFCE 378
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 57.0 bits (136), Expect(3) = 2e-16
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP++ S GG RYMMT++ D+S+KVW +
Sbjct: 696 EGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYF 736
Score = 42.0 bits (97), Expect(3) = 2e-16
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 728 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 758
Score = 33.1 bits (74), Expect(3) = 2e-16
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH +E G+ LS++GLL GQ K FCE
Sbjct: 648 GHMTEIGLAELSKRGLLDGQSIGKLKFCE 676
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 57.0 bits (136), Expect(3) = 2e-16
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP++ S GG RYMMT++ D+S+KVW +
Sbjct: 489 EGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYF 529
Score = 42.0 bits (97), Expect(3) = 2e-16
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 521 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 551
Score = 33.1 bits (74), Expect(3) = 2e-16
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH +E G+ LS++GLL GQ K FCE
Sbjct: 441 GHMTEIGLAELSKRGLLDGQSIGKLKFCE 469
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 56.2 bits (134), Expect(3) = 2e-16
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP++ S GG RYMMT++ D+S+KVW +
Sbjct: 474 EGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPYF 514
Score = 42.0 bits (97), Expect(3) = 2e-16
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 506 YSRKVWPYFLKHKYQAFNVFKEWKTMVERQT 536
Score = 33.9 bits (76), Expect(3) = 2e-16
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS +GLL GQ K FCE
Sbjct: 426 GHMSEIGLAELSMRGLLDGQSIGKLKFCE 454
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 56.2 bits (134), Expect(3) = 2e-16
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP++ S GG RYMMT++ D+S+KVW +
Sbjct: 306 EGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPYF 346
Score = 42.0 bits (97), Expect(3) = 2e-16
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 338 YSRKVWPYFLKHKYQAFNVFKEWKTMVERQT 368
Score = 33.9 bits (76), Expect(3) = 2e-16
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS +GLL GQ K FCE
Sbjct: 258 GHMSEIGLAELSMRGLLDGQSIGKLKFCE 286
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 55.8 bits (133), Expect(3) = 3e-16
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP+ S GG RYMMT++ D+S+KVW +
Sbjct: 461 EGILDYVHSDLWGPAHKTSFGGARYMMTIVDDYSRKVWPYF 501
Score = 40.4 bits (93), Expect(3) = 3e-16
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF FK+WKT+VE+QT
Sbjct: 493 YSRKVWPYFLKHKYQAFDGFKEWKTMVERQT 523
Score = 35.0 bits (79), Expect(3) = 3e-16
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++GLL GQ K FCE
Sbjct: 413 GHMSEIGLAELSKRGLLDGQSIRKLKFCE 441
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 54.7 bits (130), Expect(3) = 4e-16
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP++ S GG RY+MT++ D+S+KVW +
Sbjct: 321 EGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYF 361
Score = 42.0 bits (97), Expect(3) = 4e-16
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 353 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 383
Score = 34.3 bits (77), Expect(3) = 4e-16
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++GLL GQ K FCE
Sbjct: 273 GHMSEIGLAELSKRGLLDGQSIGKLKFCE 301
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 54.7 bits (130), Expect(3) = 4e-16
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP++ S GG RY+MT++ D+S+KVW +
Sbjct: 321 EGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYF 361
Score = 42.0 bits (97), Expect(3) = 4e-16
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 353 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 383
Score = 34.3 bits (77), Expect(3) = 4e-16
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++GLL GQ K FCE
Sbjct: 273 GHMSEIGLAELSKRGLLDGQSIGKLKFCE 301
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 53.9 bits (128), Expect(3) = 6e-16
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HS+L GP++ S GG RYMMT + D+S+KVW+ +
Sbjct: 524 EGILDYVHSNLWGPARKTSFGGARYMMTTVDDYSRKVWSYF 564
Score = 42.0 bits (97), Expect(3) = 6e-16
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+V+KQT
Sbjct: 556 YSRKVWSYFLKHKYQAFDVFKEWKTMVKKQT 586
Score = 34.3 bits (77), Expect(3) = 6e-16
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++GLL GQ K FCE
Sbjct: 476 GHMSEIGLAELSKRGLLDGQSIGKLKFCE 504
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 54.7 bits (130), Expect(3) = 6e-16
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP++ S GG RY+MT++ D+S+KVW +
Sbjct: 455 EGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYF 495
Score = 42.0 bits (97), Expect(3) = 6e-16
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 487 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 517
Score = 33.5 bits (75), Expect(3) = 6e-16
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++GLL GQ K FCE
Sbjct: 407 GHMSEIGLAELSKRGLLYGQSIGKLKFCE 435
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 55.1 bits (131), Expect(3) = 8e-16
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP+ S GG RYMMT+I D+S+KVW +
Sbjct: 310 EGILDYVHSDLWGPTCKTSFGGARYMMTIIDDYSRKVWPYF 350
Score = 42.0 bits (97), Expect(3) = 8e-16
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 342 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 372
Score = 32.7 bits (73), Expect(3) = 8e-16
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++G+L GQ K FCE
Sbjct: 262 GHMSEIGLAELSKRGMLDGQSIGKLIFCE 290
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 55.5 bits (132), Expect(3) = 1e-15
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+GTLDY+HSDL GP++ S GG YMMT++ D+S+KVW +
Sbjct: 407 EGTLDYVHSDLWGPARKTSFGGACYMMTIVDDYSRKVWPYF 447
Score = 40.0 bits (92), Expect(3) = 1e-15
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQ 36
+ RK Y +KHK +AF +FK+WKT+VE+Q
Sbjct: 439 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQ 468
Score = 33.5 bits (75), Expect(3) = 1e-15
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++GLL GQ K FCE
Sbjct: 359 GHMSEIGLAELSKRGLLYGQSIGKLKFCE 387
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 54.7 bits (130), Expect(3) = 3e-15
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP+ S GG RYMMT++ D+S+KVW +
Sbjct: 524 EGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYF 564
Score = 42.0 bits (97), Expect(3) = 3e-15
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 556 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 586
Score = 31.2 bits (69), Expect(3) = 3e-15
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++ LL GQ K FCE
Sbjct: 476 GHMSEIGLAELSKRELLDGQSIGKLKFCE 504
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 54.7 bits (130), Expect(3) = 3e-15
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
+G LDY+HSDL GP+ S GG RYMMT++ D+S+KVW +
Sbjct: 524 EGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYF 564
Score = 42.0 bits (97), Expect(3) = 3e-15
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK Y +KHK +AF +FK+WKT+VE+QT
Sbjct: 556 YSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 586
Score = 31.2 bits (69), Expect(3) = 3e-15
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH SE G+ LS++ LL GQ K FCE
Sbjct: 476 GHMSEIGLAELSKRELLDGQSIGKLKFCE 504
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 54.7 bits (130), Expect(3) = 2e-14
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = -2
Query: 213 LDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVWALY 100
LDYIHSDL GPS+V S GG RY +TLI D+S+KVW +
Sbjct: 450 LDYIHSDLWGPSRVPSIGGARYFLTLIDDYSRKVWIYF 487
Score = 40.0 bits (92), Expect(3) = 2e-14
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ RK +Y +K+K+E F+ FK+WK LVE QT
Sbjct: 479 YSRKVWIYFLKNKSETFLKFKEWKILVETQT 509
Score = 30.4 bits (67), Expect(3) = 2e-14
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH S G+ L +QG+LG K FCE
Sbjct: 399 GHISHRGLQELEKQGVLGNYKLTDLPFCE 427
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 48.1 bits (113), Expect(3) = 2e-14
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -2
Query: 222 KGTLDYIHSDL*GPSQVASHGGNRYMMTLIVDFSQKVW 109
KGTLDYIHSD GP +V S GG R+ +++I D+S+ W
Sbjct: 467 KGTLDYIHSDCWGPCRVESLGGCRFFVSIIDDYSRMTW 504
Score = 40.8 bits (94), Expect(3) = 2e-14
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -3
Query: 125 FLRKFGLYIMKHKNEAFVMFKQWKTLVEKQT 33
+ R +Y+MKHK+EAF FK+WK L+E QT
Sbjct: 499 YSRMTWVYMMKHKSEAFQKFKEWKILMENQT 529
Score = 35.8 bits (81), Expect(3) = 2e-14
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 334 GHTSESGMDVLSQQGLLGGQKTEKQDFCE 248
GH E GM +LS++ LL G K + +FCE
Sbjct: 419 GHMGERGMQILSKEDLLAGHKVKSLEFCE 447