BLASTX nr result
ID: Cornus23_contig00038151
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00038151
(315 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 96 2e-18
emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera] 76 1e-11
ref|XP_006376176.1| hypothetical protein POPTR_0013s10530g [Popu... 75 1e-11
emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera] 67 4e-09
gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii] 66 9e-09
emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera] 65 2e-08
emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera] 65 2e-08
ref|XP_008453699.1| PREDICTED: uncharacterized protein LOC103494... 64 3e-08
emb|CAN79142.1| hypothetical protein VITISV_040460 [Vitis vinifera] 64 4e-08
emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera] 63 1e-07
emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera] 62 2e-07
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group] 57 3e-07
ref|XP_008450155.1| PREDICTED: uncharacterized protein LOC103491... 60 5e-07
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera] 58 2e-06
ref|XP_008441629.1| PREDICTED: uncharacterized protein LOC103485... 57 5e-06
ref|XP_008446805.1| PREDICTED: uncharacterized protein LOC103489... 54 7e-06
ref|XP_008460441.1| PREDICTED: uncharacterized protein LOC103499... 54 1e-05
>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 95.5 bits (236), Expect(2) = 2e-18
Identities = 45/62 (72%), Positives = 52/62 (83%)
Frame = +1
Query: 124 SPQSSSFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSST 303
S SSSFYLWHSRLGH+SSSRL++L STG L NL + +I DCSGCKLAKF ALPFNRS++
Sbjct: 472 SLSSSSFYLWHSRLGHVSSSRLRFLASTGALGNLKTCDISDCSGCKLAKFSALPFNRSTS 531
Query: 304 TS 309
S
Sbjct: 532 VS 533
Score = 23.5 bits (49), Expect(2) = 2e-18
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 5 DPHSKKLIGTGRRK 46
D S+KLIGTGRR+
Sbjct: 431 DLQSQKLIGTGRRE 444
>emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]
Length = 993
Score = 75.9 bits (185), Expect(2) = 1e-11
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +1
Query: 133 SSSFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSSTTSM 312
SS FY WHSRLGHIS+ L+YL+S G L N +++I CSGCKLAKF AL FN+S + +
Sbjct: 375 SSXFYSWHSRLGHISAPHLKYLISKGFLGNFQTHDISYCSGCKLAKFSALLFNQSVSPFV 434
Query: 313 A 315
A
Sbjct: 435 A 435
Score = 20.4 bits (41), Expect(2) = 1e-11
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 8 PHSKKLIGTGRRKRIIRVRE 67
P S+ LIG GRR+ + V +
Sbjct: 330 PXSQXLIGXGRRQEGLYVMD 349
>ref|XP_006376176.1| hypothetical protein POPTR_0013s10530g [Populus trichocarpa]
gi|550325446|gb|ERP53973.1| hypothetical protein
POPTR_0013s10530g [Populus trichocarpa]
Length = 324
Score = 75.5 bits (184), Expect = 1e-11
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +1
Query: 124 SPQSSSFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFN 291
S SSSFYLW+S LGH+ SSRL++ S L+NL + NI +CSGC+LAKF LPFN
Sbjct: 269 SHSSSSFYLWYSHLGHVLSSRLRFFTSIRALENLQTCNISNCSGCRLAKFSTLPFN 324
>emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]
Length = 1287
Score = 67.4 bits (163), Expect = 4e-09
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = +1
Query: 139 SFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSSTTS 309
SF LWHSRLGH SSSR+Q LVS G+L ++ S +I+ C+ C++ K PALPFN S + S
Sbjct: 446 SFALWHSRLGHASSSRVQQLVSRGLLGSV-SKDIFYCTSCQIGKQPALPFNNSESIS 501
>gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]
Length = 732
Score = 66.2 bits (160), Expect = 9e-09
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +1
Query: 163 LGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSSTTSMA 315
LGH+S+SRL+YL STG L L + +I DC GCKLAKF ALPF++S + S A
Sbjct: 1 LGHVSASRLKYLASTGALGKLQTSDISDCCGCKLAKFSALPFSKSVSLSYA 51
>emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera]
Length = 1261
Score = 65.5 bits (158), Expect = 2e-08
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +1
Query: 139 SFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSSTTS 309
S LWHSRLGH SSR+Q LVS G+L ++ N +DC+ C+L K PALPFN S + S
Sbjct: 389 SLALWHSRLGHAPSSRVQQLVSRGLLGSVSKDN-FDCTSCQLGKQPALPFNNSESIS 444
>emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]
Length = 1271
Score = 65.5 bits (158), Expect = 2e-08
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +1
Query: 139 SFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSSTTS 309
S LWHSRLGH SSR+Q LVS G+L ++ N +DC+ C+L K PALPFN S + S
Sbjct: 471 SLALWHSRLGHAPSSRVQQLVSRGLLGSVSKDN-FDCTSCQLGKQPALPFNNSDSIS 526
>ref|XP_008453699.1| PREDICTED: uncharacterized protein LOC103494348 [Cucumis melo]
Length = 226
Score = 64.3 bits (155), Expect = 3e-08
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = +1
Query: 136 SSFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSST 303
++ + WH RLGH SS +L+ L STG+L+N+ ++ +DC CKLAK PAL F S++
Sbjct: 158 NTIFQWHLRLGHASSDKLRSLASTGILNNVSKFSTFDCLNCKLAKQPALSFPNSAS 213
>emb|CAN79142.1| hypothetical protein VITISV_040460 [Vitis vinifera]
Length = 1293
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +1
Query: 139 SFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSSTTS 309
S LWHSRLGH SS++Q LVS G+L ++ N +DC+ C+L K PALPFN S + S
Sbjct: 281 SLALWHSRLGHTPSSQVQQLVSRGLLGSVSKDN-FDCTSCQLGKQPALPFNNSESIS 336
>emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera]
Length = 1013
Score = 62.8 bits (151), Expect = 1e-07
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = +1
Query: 139 SFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSSTTS 309
S LWHSRLGH SSSR+Q LVS G+L S +I+ C+ C+L K P LPFN S + S
Sbjct: 170 SLALWHSRLGHASSSRVQQLVSRGLL-GFVSKDIFYCTSCQLGKQPTLPFNNSESIS 225
>emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]
Length = 1381
Score = 62.0 bits (149), Expect = 2e-07
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Frame = +1
Query: 139 SFYLWHSRLGHISSSRLQYLVSTGVLDNLH-------SYNIYDCSGCKLAKFPALPFNRS 297
S LWHSRLGH SSR+Q LVS G+L ++ S + +DC+ C+L K PALPFN S
Sbjct: 471 SLALWHSRLGHAPSSRVQQLVSRGLLGSVSRGLLGSVSKDNFDCTSCQLGKQPALPFNNS 530
Query: 298 STTS 309
+ S
Sbjct: 531 DSIS 534
>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1419
Score = 56.6 bits (135), Expect(2) = 3e-07
Identities = 29/62 (46%), Positives = 35/62 (56%)
Frame = +1
Query: 124 SPQSSSFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSST 303
S S+SF WH RLGH+ SRL LV GVL N+ + C GCKL K LP+ S +
Sbjct: 629 SSLSASFPQWHHRLGHLCGSRLSTLVQQGVLGNVSIETDFVCKGCKLGKQVQLPYRSSMS 688
Query: 304 TS 309
S
Sbjct: 689 RS 690
Score = 24.3 bits (51), Expect(2) = 3e-07
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 45 RELYVLEKLHVPAITAS 95
R LYVL+ LH+P T+S
Sbjct: 593 RGLYVLDHLHLPTSTSS 609
>ref|XP_008450155.1| PREDICTED: uncharacterized protein LOC103491828 [Cucumis melo]
Length = 536
Score = 60.5 bits (145), Expect = 5e-07
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = +1
Query: 136 SSFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSST 303
++ + WH RLGH SS +L+ L S+G+L+N+ ++ +DC CKLAK P L F S++
Sbjct: 349 NTIFQWHLRLGHASSDKLRNLASSGLLNNVSKFSTFDCLNCKLAKQPVLSFPNSAS 404
>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
Length = 2408
Score = 58.2 bits (139), Expect = 2e-06
Identities = 31/57 (54%), Positives = 38/57 (66%)
Frame = +1
Query: 139 SFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSSTTS 309
S L HSRLGH SSSR+Q LVS G+L + S +I+ C+ C L K PALPFN + S
Sbjct: 1597 SLALXHSRLGHXSSSRVQQLVSRGLLGS-XSKDIFXCTSCXLXKQPALPFNNXESIS 1652
>ref|XP_008441629.1| PREDICTED: uncharacterized protein LOC103485710 [Cucumis melo]
Length = 482
Score = 57.0 bits (136), Expect = 5e-06
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +1
Query: 154 HSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSST 303
H RLGH SS +L+ L S G+L+N+ ++ +DC CKLAK PAL F S++
Sbjct: 259 HLRLGHASSDKLRSLASNGILNNVSKFSTFDCLNCKLAKQPALSFPNSAS 308
>ref|XP_008446805.1| PREDICTED: uncharacterized protein LOC103489421 [Cucumis melo]
Length = 546
Score = 53.9 bits (128), Expect(2) = 7e-06
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +1
Query: 133 SSSFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSST 303
+++ + WH RLGH SS++L L ST +L+N+ ++ +DC KLAK AL F S++
Sbjct: 465 NNTLFQWHLRLGHASSNKLHSLASTDILNNVSKFSSFDCLNYKLAKQHALSFPNSAS 521
Score = 22.3 bits (46), Expect(2) = 7e-06
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +2
Query: 5 DPHSKKLIGTGRR 43
DP ++++IGTGR+
Sbjct: 428 DPQTRQVIGTGRK 440
>ref|XP_008460441.1| PREDICTED: uncharacterized protein LOC103499253 [Cucumis melo]
Length = 702
Score = 53.5 bits (127), Expect(2) = 1e-05
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +1
Query: 136 SSFYLWHSRLGHISSSRLQYLVSTGVLDNLHSYNIYDCSGCKLAKFPALPFNRSSTTS 309
S Y WH RLGH S L++L+S L++ + ++C CKLAK PAL F+ S++ S
Sbjct: 363 SDTYQWHLRLGHASPENLRHLISINHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSIS 420
Score = 22.3 bits (46), Expect(2) = 1e-05
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 5 DPHSKKLIGTGRRKR 49
DP +++ IGTGR+ R
Sbjct: 326 DPQTEQTIGTGRKVR 340