BLASTX nr result
ID: Cornus23_contig00038108
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00038108
(375 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010474601.1| PREDICTED: uncharacterized protein LOC104754... 74 2e-15
ref|XP_013739777.1| PREDICTED: uncharacterized protein LOC106442... 69 3e-15
gb|KHN39948.1| Retrovirus-related Pol polyprotein LINE-1, partia... 75 3e-15
ref|XP_013746122.1| PREDICTED: uncharacterized protein LOC106448... 67 6e-15
ref|XP_013617747.1| PREDICTED: uncharacterized protein LOC106324... 69 8e-15
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 73 1e-14
ref|XP_013608127.1| PREDICTED: uncharacterized protein LOC106314... 82 2e-14
ref|XP_013717736.1| PREDICTED: uncharacterized protein LOC106421... 82 2e-14
ref|XP_013731325.1| PREDICTED: uncharacterized protein LOC106435... 70 4e-14
ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936... 69 4e-14
ref|XP_013727563.1| PREDICTED: uncharacterized protein LOC106431... 78 4e-14
ref|XP_013614042.1| PREDICTED: uncharacterized protein LOC106320... 78 4e-14
emb|CAN64368.1| hypothetical protein VITISV_040345 [Vitis vinifera] 61 4e-14
ref|XP_013739698.1| PREDICTED: uncharacterized protein LOC106442... 76 5e-14
ref|XP_013607513.1| PREDICTED: uncharacterized protein LOC106314... 76 5e-14
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 70 5e-14
ref|XP_010054178.1| PREDICTED: uncharacterized protein LOC104442... 69 5e-14
ref|XP_013589269.1| PREDICTED: uncharacterized protein LOC106297... 80 5e-14
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 70 7e-14
ref|XP_013751894.1| PREDICTED: uncharacterized protein LOC106454... 67 9e-14
>ref|XP_010474601.1| PREDICTED: uncharacterized protein LOC104754160 [Camelina sativa]
Length = 1368
Score = 73.9 bits (180), Expect(2) = 2e-15
Identities = 38/80 (47%), Positives = 55/80 (68%)
Frame = +3
Query: 135 IGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTYKIITKVMT 314
IG+D+ ++VK FF KL K+IN + I LIPKK + V+++ + PIS+ N YKII+KVM
Sbjct: 393 IGEDIVNMVKTFFQSGKLEKDINRTNICLIPKKLKAVKLAEFRPISLSNVVYKIISKVMA 452
Query: 315 NRLALVLNN*VGLEQSAFIK 374
RL +L + + Q+AFIK
Sbjct: 453 KRLTSLLPDIISETQAAFIK 472
Score = 34.7 bits (78), Expect(2) = 2e-15
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 11 QMLKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
+ L VT E++ R V D +P+K G DG F+ +FW
Sbjct: 352 EYLLTEVTVEEVKRAVFDINPNKCPGPDGMTGFFFQQFW 390
>ref|XP_013739777.1| PREDICTED: uncharacterized protein LOC106442663 [Brassica napus]
Length = 949
Score = 68.6 bits (166), Expect(2) = 3e-15
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +3
Query: 135 IGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTYKIITKVMT 314
+G DV +VK FF ++ + IN + + LIPK DR ++ + PIS+CN +YKII+K+++
Sbjct: 44 VGHDVTKIVKDFFETGEMDERINQTNVCLIPKTDRPTTMADFRPISLCNVSYKIISKILS 103
Query: 315 NRLALVLNN*VGLEQSAFI 371
NRL +L + Q AF+
Sbjct: 104 NRLKKILPQLISETQLAFV 122
Score = 39.7 bits (91), Expect(2) = 3e-15
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 11 QMLKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
+ L AP TD +I V +P+KA G DG + FY RFW
Sbjct: 3 EALLAPTTDVEIKDAVFSINPEKAPGPDGMTSLFYQRFW 41
>gb|KHN39948.1| Retrovirus-related Pol polyprotein LINE-1, partial [Glycine soja]
Length = 119
Score = 75.1 bits (183), Expect(2) = 3e-15
Identities = 36/87 (41%), Positives = 55/87 (63%)
Frame = +3
Query: 111 FIRGSGGTIGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTY 290
F + + IG D+ VV FF KL K I+ + I LIPK D+ +++++ PIS CN Y
Sbjct: 33 FFKKAWNIIGDDIFVVVNEFFMSGKLLKQIHHALIALIPKSDQASQVNHFRPISCCNLLY 92
Query: 291 KIITKVMTNRLALVLNN*VGLEQSAFI 371
KII+K++ NR+A +L + +G Q AF+
Sbjct: 93 KIISKILVNRIAPMLEHIIGASQFAFL 119
Score = 33.1 bits (74), Expect(2) = 3e-15
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 17 LKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
L +P+T +D+ V+ +KALG DG+ F+ + W
Sbjct: 2 LLSPITKQDVWNVISGMDNNKALGPDGYNTLFFKKAW 38
>ref|XP_013746122.1| PREDICTED: uncharacterized protein LOC106448840 [Brassica napus]
Length = 1566
Score = 67.0 bits (162), Expect(2) = 6e-15
Identities = 37/79 (46%), Positives = 50/79 (63%)
Frame = +3
Query: 135 IGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTYKIITKVMT 314
IG D+ +VK FF L + IN + I LI K +R +S + PIS+CN +YK+I+KVM+
Sbjct: 658 IGPDIVRMVKDFFNSGDLDERINQTNICLILKTERPKSMSEFRPISLCNVSYKVISKVMS 717
Query: 315 NRLALVLNN*VGLEQSAFI 371
RL VL N V QSAF+
Sbjct: 718 TRLKHVLPNLVSETQSAFV 736
Score = 40.0 bits (92), Expect(2) = 6e-15
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 11 QMLKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
+ML T+E+I + + HP+KA G DG + FY RFW
Sbjct: 617 EMLIREPTEEEIKKAMFSIHPEKAPGPDGMTSLFYQRFW 655
>ref|XP_013617747.1| PREDICTED: uncharacterized protein LOC106324299 [Brassica oleracea
var. oleracea]
Length = 900
Score = 68.9 bits (167), Expect(2) = 8e-15
Identities = 33/79 (41%), Positives = 52/79 (65%)
Frame = +3
Query: 135 IGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTYKIITKVMT 314
+G DV +VK FF ++ + IN + I LIPK DR ++ + PIS+CN +YKII+K+++
Sbjct: 89 VGHDVTKMVKDFFETREMDERINQTNIRLIPKTDRPTTMAEFRPISLCNVSYKIISKILS 148
Query: 315 NRLALVLNN*VGLEQSAFI 371
+RL +L + QSAF+
Sbjct: 149 SRLKKILPQLISETQSAFV 167
Score = 37.7 bits (86), Expect(2) = 8e-15
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 11 QMLKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
+ L AP T+ +I V +P+KA G DG + FY RFW
Sbjct: 48 EALLAPTTEVEIKDAVFSINPEKAPGPDGVTSLFYQRFW 86
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 73.2 bits (178), Expect(2) = 1e-14
Identities = 37/88 (42%), Positives = 52/88 (59%)
Frame = +3
Query: 111 FIRGSGGTIGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTY 290
F +G+ IG + ++ FFA L K IN++ + LIPKK + Y PIS CN Y
Sbjct: 368 FYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRPISCCNVLY 427
Query: 291 KIITKVMTNRLALVLNN*VGLEQSAFIK 374
K+I+K++ NRL LVL + QSAF+K
Sbjct: 428 KVISKIIANRLKLVLPKFIVGNQSAFVK 455
Score = 32.7 bits (73), Expect(2) = 1e-14
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 2 AEAQMLKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
++ +ML V+ E+I +VV DK+ G DG+ A FY W
Sbjct: 332 SDKEMLTNHVSAEEIHKVVFSMPNDKSPGPDGYTAEFYKGAW 373
>ref|XP_013608127.1| PREDICTED: uncharacterized protein LOC106314861 [Brassica oleracea
var. oleracea]
Length = 863
Score = 81.6 bits (200), Expect(2) = 2e-14
Identities = 39/88 (44%), Positives = 58/88 (65%)
Frame = +3
Query: 111 FIRGSGGTIGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTY 290
FIR S T+G+D+ + V FF + +L K++NT+ I LIPKK + + Y PIS CN Y
Sbjct: 712 FIRASWDTVGEDIINAVSEFFRNGRLLKDMNTTAIALIPKKPQACSLGDYRPISCCNIVY 771
Query: 291 KIITKVMTNRLALVLNN*VGLEQSAFIK 374
K+I+K++ NRL +L+ V Q+AF+K
Sbjct: 772 KLISKIVANRLKPILSKCVSPNQAAFLK 799
Score = 23.5 bits (49), Expect(2) = 2e-14
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 17 LKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
LK PVT +I + +K+ G DG+ F W
Sbjct: 681 LKRPVTAAEIKVTLFTMPLNKSPGPDGYSVEFIRASW 717
>ref|XP_013717736.1| PREDICTED: uncharacterized protein LOC106421439 [Brassica napus]
Length = 826
Score = 81.6 bits (200), Expect(2) = 2e-14
Identities = 39/88 (44%), Positives = 58/88 (65%)
Frame = +3
Query: 111 FIRGSGGTIGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTY 290
FIR S T+G+D+ + V FF + +L K++NT+ I LIPKK + + Y PIS CN Y
Sbjct: 675 FIRASWDTVGEDIINAVSEFFRNGRLLKDMNTTAIALIPKKPQACSLGDYRPISCCNIVY 734
Query: 291 KIITKVMTNRLALVLNN*VGLEQSAFIK 374
K+I+K++ NRL +L+ V Q+AF+K
Sbjct: 735 KLISKIVANRLKPILSKCVSPNQAAFLK 762
Score = 23.5 bits (49), Expect(2) = 2e-14
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 17 LKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
LK PVT +I + +K+ G DG+ F W
Sbjct: 644 LKRPVTAAEIKVTLFTMPLNKSPGPDGYSVEFIRASW 680
>ref|XP_013731325.1| PREDICTED: uncharacterized protein LOC106435016 [Brassica napus]
Length = 1991
Score = 69.7 bits (169), Expect(2) = 4e-14
Identities = 35/80 (43%), Positives = 53/80 (66%)
Frame = +3
Query: 132 TIGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTYKIITKVM 311
TIG+D+ V+ FF +L + IN + I LIPK +R ++ + PIS+CN +YKII+KV+
Sbjct: 1083 TIGRDIVHTVQNFFVSGELDERINQTNICLIPKMERPRSMTEFRPISLCNVSYKIISKVL 1142
Query: 312 TNRLALVLNN*VGLEQSAFI 371
++RL VL + QSAF+
Sbjct: 1143 SSRLRKVLPKIISETQSAFV 1162
Score = 34.7 bits (78), Expect(2) = 4e-14
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 32 TDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
T+ +I V +PDKA G DG + FY RFW
Sbjct: 1050 TEAEIKETVFAINPDKAPGPDGMTSLFYQRFW 1081
>ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936764 [Pyrus x
bretschneideri]
Length = 1365
Score = 68.6 bits (166), Expect(2) = 4e-14
Identities = 33/78 (42%), Positives = 50/78 (64%)
Frame = +3
Query: 138 GKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTYKIITKVMTN 317
GKDVC +VK F +L NIN +FI+LIPK D ++ PIS+C+T YK+I+K++
Sbjct: 464 GKDVCDMVKVCFNTTQLPDNINNTFISLIPKVDNPTSMTQLRPISLCSTLYKVISKILVG 523
Query: 318 RLALVLNN*VGLEQSAFI 371
+L +L+ V Q +F+
Sbjct: 524 KLRPLLHKLVSPTQVSFV 541
Score = 35.8 bits (81), Expect(2) = 4e-14
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 14 MLKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
+L VTD++I + KA G DG PARFY +FW
Sbjct: 423 VLNGEVTDDEIKACMFAIGGLKAPGPDGIPARFYQKFW 460
>ref|XP_013727563.1| PREDICTED: uncharacterized protein LOC106431300 [Brassica napus]
Length = 1283
Score = 78.2 bits (191), Expect(2) = 4e-14
Identities = 38/88 (43%), Positives = 52/88 (59%)
Frame = +3
Query: 111 FIRGSGGTIGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTY 290
F + S IGKD+ V+ FF+ L K +NT+ + LIPKKD + Y PIS CN Y
Sbjct: 567 FFKASWSIIGKDLTIAVQSFFSKGFLPKGLNTTILALIPKKDNATEMKDYRPISCCNVLY 626
Query: 291 KIITKVMTNRLALVLNN*VGLEQSAFIK 374
K+I+K++ NRL L N + QS F+K
Sbjct: 627 KVISKIIANRLKGTLPNCISHNQSGFVK 654
Score = 26.2 bits (56), Expect(2) = 4e-14
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 5 EAQMLKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
E L V+ E+I V+ DK+ G DG+ F+ W
Sbjct: 532 ERAQLTKTVSSEEIRDVLFRMPNDKSPGPDGYTTEFFKASW 572
>ref|XP_013614042.1| PREDICTED: uncharacterized protein LOC106320219 [Brassica oleracea
var. oleracea]
Length = 1283
Score = 78.2 bits (191), Expect(2) = 4e-14
Identities = 38/88 (43%), Positives = 52/88 (59%)
Frame = +3
Query: 111 FIRGSGGTIGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTY 290
F + S IGKD+ V+ FF+ L K +NT+ + LIPKKD + Y PIS CN Y
Sbjct: 567 FFKASWSIIGKDLTIAVQSFFSKGFLPKGLNTTILALIPKKDNATEMKDYRPISCCNVLY 626
Query: 291 KIITKVMTNRLALVLNN*VGLEQSAFIK 374
K+I+K++ NRL L N + QS F+K
Sbjct: 627 KVISKIIANRLKGTLPNCISHNQSGFVK 654
Score = 26.2 bits (56), Expect(2) = 4e-14
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 5 EAQMLKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
E L V+ E+I V+ DK+ G DG+ F+ W
Sbjct: 532 ERAQLTKTVSSEEIRDVLFRMPNDKSPGPDGYTTEFFKASW 572
>emb|CAN64368.1| hypothetical protein VITISV_040345 [Vitis vinifera]
Length = 423
Score = 60.8 bits (146), Expect(2) = 4e-14
Identities = 27/80 (33%), Positives = 50/80 (62%)
Frame = +3
Query: 135 IGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTYKIITKVMT 314
I ++V + K F+ +K++N++F+ +IPKK + + PIS+ YK++ KV+
Sbjct: 104 IKEEVVELFKEFYDQKSFAKSLNSTFLVIIPKKGGAEDLGEFQPISLLRGLYKLMAKVLA 163
Query: 315 NRLALVLNN*VGLEQSAFIK 374
NRL +VL+ V +Q+AF++
Sbjct: 164 NRLKMVLDKVVSADQNAFVR 183
Score = 43.5 bits (101), Expect(2) = 4e-14
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 2 AEAQMLKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFWGY 133
+EA+ L+ P T+E+I +MD + DKALG DGF F+ W +
Sbjct: 60 SEAEALEVPFTEEEIFSALMDMNGDKALGPDGFTMAFWQVCWDF 103
>ref|XP_013739698.1| PREDICTED: uncharacterized protein LOC106442576 [Brassica napus]
Length = 1526
Score = 76.3 bits (186), Expect(2) = 5e-14
Identities = 38/88 (43%), Positives = 52/88 (59%)
Frame = +3
Query: 111 FIRGSGGTIGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTY 290
F + S IGKD V+ FF+ L K +N++ + LIPKKDR + Y PIS CN Y
Sbjct: 847 FFKASWSVIGKDFTVAVQSFFSKGFLPKGLNSTILALIPKKDRAQEMRDYRPISCCNVLY 906
Query: 291 KIITKVMTNRLALVLNN*VGLEQSAFIK 374
K+I+K++ N+L L + QSAFIK
Sbjct: 907 KVISKIIANKLKGTLPQCISYNQSAFIK 934
Score = 27.7 bits (60), Expect(2) = 5e-14
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 29 VTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
VT+E++ VV +K+ G DG+ + F+ W
Sbjct: 820 VTEEEVREVVFKMPSNKSPGPDGYTSEFFKASW 852
>ref|XP_013607513.1| PREDICTED: uncharacterized protein LOC106314125 [Brassica oleracea
var. oleracea]
Length = 1524
Score = 76.3 bits (186), Expect(2) = 5e-14
Identities = 38/88 (43%), Positives = 52/88 (59%)
Frame = +3
Query: 111 FIRGSGGTIGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTY 290
F + S IGKD V+ FF+ L K +N++ + LIPKKDR + Y PIS CN Y
Sbjct: 847 FFKASWSVIGKDFTVAVQSFFSKGFLPKGLNSTILALIPKKDRAQEMRDYRPISCCNVLY 906
Query: 291 KIITKVMTNRLALVLNN*VGLEQSAFIK 374
K+I+K++ N+L L + QSAFIK
Sbjct: 907 KVISKIIANKLKGTLPQCISYNQSAFIK 934
Score = 27.7 bits (60), Expect(2) = 5e-14
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 29 VTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
VT+E++ VV +K+ G DG+ + F+ W
Sbjct: 820 VTEEEVREVVFKMPSNKSPGPDGYTSEFFKASW 852
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 70.1 bits (170), Expect(2) = 5e-14
Identities = 36/88 (40%), Positives = 50/88 (56%)
Frame = +3
Query: 111 FIRGSGGTIGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTY 290
F + + IG + V+ FF L K IN++ + LIPKK + Y PIS CN Y
Sbjct: 480 FFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLY 539
Query: 291 KIITKVMTNRLALVLNN*VGLEQSAFIK 374
K+I+K++ NRL LVL + QSAF+K
Sbjct: 540 KVISKIIANRLKLVLPKFIAGNQSAFVK 567
Score = 33.9 bits (76), Expect(2) = 5e-14
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 2 AEAQMLKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
A+ Q L PVT E+I +V+ DK+ G DG+ + F+ W
Sbjct: 444 ADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATW 485
>ref|XP_010054178.1| PREDICTED: uncharacterized protein LOC104442439 [Eucalyptus grandis]
Length = 952
Score = 68.6 bits (166), Expect(2) = 5e-14
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +3
Query: 111 FIRGSGGTIGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTY 290
F + + +G V + V FF KL + IN + + ++PK + Y PI+ CNT Y
Sbjct: 810 FFKENWDKVGPLVTTAVLDFFTSGKLLREINNTILVMVPKVLNATSVEDYRPIACCNTIY 869
Query: 291 KIITKVMTNRLALVLNN*VGLEQSAFIK 374
K ITKV+ NR+AL L + +G Q+AF+K
Sbjct: 870 KCITKVLANRVALALKSTIGPFQTAFVK 897
Score = 35.4 bits (80), Expect(2) = 5e-14
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 5 EAQMLKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
+A +L PVT+ +IL + KALG DGF A F+ W
Sbjct: 775 QAVLLARPVTELEILDTIFSLPKGKALGPDGFIAEFFKENW 815
>ref|XP_013589269.1| PREDICTED: uncharacterized protein LOC106297608 [Brassica oleracea
var. oleracea]
Length = 674
Score = 79.7 bits (195), Expect(2) = 5e-14
Identities = 38/88 (43%), Positives = 59/88 (67%)
Frame = +3
Query: 111 FIRGSGGTIGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTY 290
F+R S +GKDV + V+ FF + +L K+IN + I LIPK + ++ + PIS CNT Y
Sbjct: 424 FLRSSWSVVGKDVTAAVREFFRNGRLLKDINNTTIALIPKCTQACKLGDFRPISCCNTVY 483
Query: 291 KIITKVMTNRLALVLNN*VGLEQSAFIK 374
KII++++ NRL VL++ + Q+AF+K
Sbjct: 484 KIISRIICNRLKPVLSSAISPNQAAFLK 511
Score = 24.3 bits (51), Expect(2) = 5e-14
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = +2
Query: 17 LKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
L+ + DE++ + + +K G DG+ F W
Sbjct: 393 LQKEIIDEEVTKTIFSMPLNKCPGPDGYSVEFLRSSW 429
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 70.5 bits (171), Expect(2) = 7e-14
Identities = 37/88 (42%), Positives = 50/88 (56%)
Frame = +3
Query: 111 FIRGSGGTIGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTY 290
F + + IG + VK FF L K +NT+ + LIPKK + Y PIS CN Y
Sbjct: 895 FYKRAWDIIGAEFVLAVKSFFEKGFLPKGVNTTILALIPKKLEAKEMKDYRPISCCNVIY 954
Query: 291 KIITKVMTNRLALVLNN*VGLEQSAFIK 374
K+I+K++ NRL VL N + QSAF+K
Sbjct: 955 KVISKIIANRLKHVLPNFIAGNQSAFVK 982
Score = 33.1 bits (74), Expect(2) = 7e-14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 2 AEAQMLKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFW 127
AE ML A V+ ++I + DK+ G DG+ + FY R W
Sbjct: 859 AEKDMLTASVSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAW 900
>ref|XP_013751894.1| PREDICTED: uncharacterized protein LOC106454299 [Brassica napus]
Length = 1201
Score = 67.0 bits (162), Expect(2) = 9e-14
Identities = 31/79 (39%), Positives = 51/79 (64%)
Frame = +3
Query: 135 IGKDVCSVVKYFFAHPKLSKNINTSFITLIPKKDRVVRISYYMPISVCNTTYKIITKVMT 314
IGKD+ +V+ FF + + +N + I LIPK +R ++ + PIS+CN +YKII+K+++
Sbjct: 508 IGKDIMCIVREFFETGEFDERMNQTNICLIPKNERPANMAEFRPISLCNVSYKIISKILS 567
Query: 315 NRLALVLNN*VGLEQSAFI 371
RL +L + QSAF+
Sbjct: 568 ARLKKILPELISETQSAFV 586
Score = 36.2 bits (82), Expect(2) = 9e-14
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +2
Query: 14 MLKAPVTDEDILRVVMDFHPDKALGQDGFPARFY*RFWGY 133
ML AP +D +I V +PDK G DG + F RFW +
Sbjct: 468 MLTAPPSDAEIKDAVFAINPDKVPGPDGMTSLFNQRFWNH 507