BLASTX nr result

ID: Cornus23_contig00038099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00038099
         (301 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69690.1| hypothetical protein VITISV_026776 [Vitis vinifera]    73   7e-11
ref|XP_010660170.1| PREDICTED: protein CHROMATIN REMODELING 20 i...    71   3e-10
ref|XP_010660172.1| PREDICTED: protein CHROMATIN REMODELING 20 i...    71   3e-10
emb|CBI22318.3| unnamed protein product [Vitis vinifera]               71   3e-10
ref|XP_010264860.1| PREDICTED: protein CHROMATIN REMODELING 20 i...    69   2e-09
ref|XP_010264859.1| PREDICTED: protein CHROMATIN REMODELING 20 i...    69   2e-09

>emb|CAN69690.1| hypothetical protein VITISV_026776 [Vitis vinifera]
          Length = 600

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 39/99 (39%), Positives = 56/99 (56%)
 Frame = -1

Query: 298 RFKQEAIQKEVPSDNTLMEGNAYGSSPSHAVAGEKTHGNGEGVHSDNNETACQKLKTDIK 119
           + KQE IQKE      +++ +   +  S AV  EKT G+G  + ++N++ ACQ  KT++ 
Sbjct: 39  KLKQETIQKEDRLAENILDNSVLLNDYSQAVLREKTRGDGVSISNNNDDGACQSSKTEVS 98

Query: 118 ESFESSVDLDKKEPTCNGCSPAFSESGLPNFIEPRGSKR 2
           ES E    LDK+ P  NG S   S S LP+  E +G KR
Sbjct: 99  ESLEMPDTLDKERPASNGNSSVLSGSVLPDSTETKGFKR 137


>ref|XP_010660170.1| PREDICTED: protein CHROMATIN REMODELING 20 isoform X1 [Vitis
           vinifera] gi|731417105|ref|XP_010660171.1| PREDICTED:
           protein CHROMATIN REMODELING 20 isoform X1 [Vitis
           vinifera]
          Length = 1506

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 39/99 (39%), Positives = 55/99 (55%)
 Frame = -1

Query: 298 RFKQEAIQKEVPSDNTLMEGNAYGSSPSHAVAGEKTHGNGEGVHSDNNETACQKLKTDIK 119
           R  QE IQKE      +++ +   +  S AV  EKT G+G  + ++N++ ACQ  KT++ 
Sbjct: 333 RSTQETIQKEDRLAENILDNSVLLNDYSQAVLREKTRGDGVSISNNNDDGACQSSKTEVS 392

Query: 118 ESFESSVDLDKKEPTCNGCSPAFSESGLPNFIEPRGSKR 2
           ES E    LDK+ P  NG S   S S LP+  E +G KR
Sbjct: 393 ESLEMPDTLDKERPASNGNSSVLSGSVLPDSTETKGFKR 431


>ref|XP_010660172.1| PREDICTED: protein CHROMATIN REMODELING 20 isoform X2 [Vitis
           vinifera]
          Length = 1505

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 39/99 (39%), Positives = 55/99 (55%)
 Frame = -1

Query: 298 RFKQEAIQKEVPSDNTLMEGNAYGSSPSHAVAGEKTHGNGEGVHSDNNETACQKLKTDIK 119
           R  QE IQKE      +++ +   +  S AV  EKT G+G  + ++N++ ACQ  KT++ 
Sbjct: 333 RSTQETIQKEDRLAENILDNSVLLNDYSQAVLREKTRGDGVSISNNNDDGACQSSKTEVS 392

Query: 118 ESFESSVDLDKKEPTCNGCSPAFSESGLPNFIEPRGSKR 2
           ES E    LDK+ P  NG S   S S LP+  E +G KR
Sbjct: 393 ESLEMPDTLDKERPASNGNSSVLSGSVLPDSTETKGFKR 431


>emb|CBI22318.3| unnamed protein product [Vitis vinifera]
          Length = 1477

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 39/99 (39%), Positives = 55/99 (55%)
 Frame = -1

Query: 298 RFKQEAIQKEVPSDNTLMEGNAYGSSPSHAVAGEKTHGNGEGVHSDNNETACQKLKTDIK 119
           R  QE IQKE      +++ +   +  S AV  EKT G+G  + ++N++ ACQ  KT++ 
Sbjct: 305 RSTQETIQKEDRLAENILDNSVLLNDYSQAVLREKTRGDGVSISNNNDDGACQSSKTEVS 364

Query: 118 ESFESSVDLDKKEPTCNGCSPAFSESGLPNFIEPRGSKR 2
           ES E    LDK+ P  NG S   S S LP+  E +G KR
Sbjct: 365 ESLEMPDTLDKERPASNGNSSVLSGSVLPDSTETKGFKR 403


>ref|XP_010264860.1| PREDICTED: protein CHROMATIN REMODELING 20 isoform X2 [Nelumbo
           nucifera]
          Length = 1444

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
 Frame = -1

Query: 298 RFKQEAIQKEVPSDNTLMEGNAYGSSPS----HAVAGEKTHGNGEGVHSDNNETACQKLK 131
           R KQE IQKEV S + + E NA  S PS    H  +G+   G GEGV   NN  A     
Sbjct: 237 RCKQEVIQKEVCSVDQMHESNAISSKPSNGYSHLDSGDVACGVGEGVSRANNSEAFHPSG 296

Query: 130 TDIKESFESSVDLDKKEPTCNGCSPAFSESGLPNFIEPRGSKR 2
            ++ +  E S++L+K+ P  +G S    ES   +  EPRGSKR
Sbjct: 297 FEVLDKLEISMELEKERPMESGTSSVLVESSSADLAEPRGSKR 339


>ref|XP_010264859.1| PREDICTED: protein CHROMATIN REMODELING 20 isoform X1 [Nelumbo
           nucifera]
          Length = 1539

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
 Frame = -1

Query: 298 RFKQEAIQKEVPSDNTLMEGNAYGSSPS----HAVAGEKTHGNGEGVHSDNNETACQKLK 131
           R KQE IQKEV S + + E NA  S PS    H  +G+   G GEGV   NN  A     
Sbjct: 332 RCKQEVIQKEVCSVDQMHESNAISSKPSNGYSHLDSGDVACGVGEGVSRANNSEAFHPSG 391

Query: 130 TDIKESFESSVDLDKKEPTCNGCSPAFSESGLPNFIEPRGSKR 2
            ++ +  E S++L+K+ P  +G S    ES   +  EPRGSKR
Sbjct: 392 FEVLDKLEISMELEKERPMESGTSSVLVESSSADLAEPRGSKR 434


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