BLASTX nr result

ID: Cornus23_contig00037160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00037160
         (300 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009376633.1| PREDICTED: ATP-dependent DNA helicase Q-like...    59   2e-06
gb|KDO56238.1| hypothetical protein CISIN_1g004098mg [Citrus sin...    58   2e-06
gb|KDO56237.1| hypothetical protein CISIN_1g004098mg [Citrus sin...    58   2e-06
ref|XP_006433399.1| hypothetical protein CICLE_v10000234mg [Citr...    58   2e-06
ref|XP_010659632.1| PREDICTED: ATP-dependent DNA helicase Q-like...    57   5e-06
ref|XP_010659631.1| PREDICTED: ATP-dependent DNA helicase Q-like...    57   5e-06
ref|XP_008370445.1| PREDICTED: ATP-dependent DNA helicase Q-like...    57   5e-06
ref|XP_008370444.1| PREDICTED: ATP-dependent DNA helicase Q-like...    57   5e-06
ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like...    57   5e-06

>ref|XP_009376633.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM [Pyrus x
           bretschneideri]
          Length = 902

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%)
 Frame = -2

Query: 296 NDAVDFILNGSHRKSKNASSSFKCSTSNKKAXXXXXXXXXXXXXXXXXLEHLKPAARPKR 117
           +DA+D++LNG  R ++ A SS +C+T N+KA                 L+H+    RPKR
Sbjct: 39  DDALDYVLNGCSRNNQRALSSSRCTTRNEKALGKRAFTAPGQIRQSSILDHIHSTGRPKR 98

Query: 116 SRTSVEPDVLVSGSEV 69
            +T V PDV VSGS++
Sbjct: 99  IKTEVLPDVSVSGSKL 114


>gb|KDO56238.1| hypothetical protein CISIN_1g004098mg [Citrus sinensis]
           gi|641837284|gb|KDO56239.1| hypothetical protein
           CISIN_1g004098mg [Citrus sinensis]
          Length = 679

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
 Frame = -2

Query: 296 NDAVDFILNGSHRKSKNASSSF--KCSTSNKKAXXXXXXXXXXXXXXXXXL---EHLKPA 132
           NDA+++ILNGS R SK  S S+  KC T N K                      +H +  
Sbjct: 37  NDAIEYILNGSVRNSKGKSVSWSSKCVTENGKTLGKRTLSSANSLGQMRQASLLDHFQSG 96

Query: 131 ARPKRSRTSVEPDVLVSGSEVSPNFLEGPNEALPVLDSNRK 9
            R KR + +V  DV VSGS VSP+ +E   E+ P +D N K
Sbjct: 97  NRQKRGKRNVGDDVSVSGSVVSPSIVEEQKESYPGMDCNLK 137


>gb|KDO56237.1| hypothetical protein CISIN_1g004098mg [Citrus sinensis]
          Length = 774

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
 Frame = -2

Query: 296 NDAVDFILNGSHRKSKNASSSF--KCSTSNKKAXXXXXXXXXXXXXXXXXL---EHLKPA 132
           NDA+++ILNGS R SK  S S+  KC T N K                      +H +  
Sbjct: 37  NDAIEYILNGSVRNSKGKSVSWSSKCVTENGKTLGKRTLSSANSLGQMRQASLLDHFQSG 96

Query: 131 ARPKRSRTSVEPDVLVSGSEVSPNFLEGPNEALPVLDSNRK 9
            R KR + +V  DV VSGS VSP+ +E   E+ P +D N K
Sbjct: 97  NRQKRGKRNVGDDVSVSGSVVSPSIVEEQKESYPGMDCNLK 137


>ref|XP_006433399.1| hypothetical protein CICLE_v10000234mg [Citrus clementina]
           gi|568836077|ref|XP_006472075.1| PREDICTED:
           ATP-dependent DNA helicase Q-like SIM-like isoform X1
           [Citrus sinensis] gi|557535521|gb|ESR46639.1|
           hypothetical protein CICLE_v10000234mg [Citrus
           clementina]
          Length = 877

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
 Frame = -2

Query: 296 NDAVDFILNGSHRKSKNASSSF--KCSTSNKKAXXXXXXXXXXXXXXXXXL---EHLKPA 132
           NDA+++ILNGS R SK  S S+  KC T N K                      +H +  
Sbjct: 37  NDAIEYILNGSVRNSKGKSVSWSSKCVTENGKTLGKRTLSSANSLGQMRQASLLDHFQSG 96

Query: 131 ARPKRSRTSVEPDVLVSGSEVSPNFLEGPNEALPVLDSNRK 9
            R KR + +V  DV VSGS VSP+ +E   E+ P +D N K
Sbjct: 97  NRQKRGKRNVGDDVSVSGSVVSPSIVEEQKESYPGMDCNLK 137


>ref|XP_010659632.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X3 [Vitis
           vinifera]
          Length = 820

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 38/87 (43%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
 Frame = -2

Query: 299 LNDAVDFILNGSHRKSKNASSSFKCSTSNKKA---XXXXXXXXXXXXXXXXXLEHLKPAA 129
           L+DA++FILNG HR S+ ASS+ KC TS  KA                     EHL+P  
Sbjct: 48  LDDAIEFILNGPHRSSRGASSNSKCPTSTGKALDKTALISSHSLDQMRQSSITEHLQPVG 107

Query: 128 RPKRSRT-SVEPDVLVSGSEVSPNFLE 51
           R KR RT SV   V   GSE+ P  LE
Sbjct: 108 RSKRIRTNSVYNAVSPYGSEMLPGHLE 134


>ref|XP_010659631.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X1 [Vitis
           vinifera]
          Length = 905

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 38/87 (43%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
 Frame = -2

Query: 299 LNDAVDFILNGSHRKSKNASSSFKCSTSNKKA---XXXXXXXXXXXXXXXXXLEHLKPAA 129
           L+DA++FILNG HR S+ ASS+ KC TS  KA                     EHL+P  
Sbjct: 48  LDDAIEFILNGPHRSSRGASSNSKCPTSTGKALDKTALISSHSLDQMRQSSITEHLQPVG 107

Query: 128 RPKRSRT-SVEPDVLVSGSEVSPNFLE 51
           R KR RT SV   V   GSE+ P  LE
Sbjct: 108 RSKRIRTNSVYNAVSPYGSEMLPGHLE 134


>ref|XP_008370445.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X2 [Malus
           domestica]
          Length = 873

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/76 (39%), Positives = 42/76 (55%)
 Frame = -2

Query: 296 NDAVDFILNGSHRKSKNASSSFKCSTSNKKAXXXXXXXXXXXXXXXXXLEHLKPAARPKR 117
           +DA+D++LNG  R ++ A SS +C+T N KA                 L+H     RPKR
Sbjct: 39  DDALDYVLNGCSRNNQGALSSSRCTTRNVKALGKRAFTAPGQIRQSSILDHFHSTGRPKR 98

Query: 116 SRTSVEPDVLVSGSEV 69
            +T V PDV VSGS++
Sbjct: 99  IKTEVVPDVSVSGSKL 114


>ref|XP_008370444.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X1 [Malus
           domestica]
          Length = 900

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/76 (39%), Positives = 42/76 (55%)
 Frame = -2

Query: 296 NDAVDFILNGSHRKSKNASSSFKCSTSNKKAXXXXXXXXXXXXXXXXXLEHLKPAARPKR 117
           +DA+D++LNG  R ++ A SS +C+T N KA                 L+H     RPKR
Sbjct: 39  DDALDYVLNGCSRNNQGALSSSRCTTRNVKALGKRAFTAPGQIRQSSILDHFHSTGRPKR 98

Query: 116 SRTSVEPDVLVSGSEV 69
            +T V PDV VSGS++
Sbjct: 99  IKTEVVPDVSVSGSKL 114


>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X2 [Vitis
           vinifera]
          Length = 893

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 38/87 (43%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
 Frame = -2

Query: 299 LNDAVDFILNGSHRKSKNASSSFKCSTSNKKA---XXXXXXXXXXXXXXXXXLEHLKPAA 129
           L+DA++FILNG HR S+ ASS+ KC TS  KA                     EHL+P  
Sbjct: 36  LDDAIEFILNGPHRSSRGASSNSKCPTSTGKALDKTALISSHSLDQMRQSSITEHLQPVG 95

Query: 128 RPKRSRT-SVEPDVLVSGSEVSPNFLE 51
           R KR RT SV   V   GSE+ P  LE
Sbjct: 96  RSKRIRTNSVYNAVSPYGSEMLPGHLE 122


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