BLASTX nr result

ID: Cornus23_contig00036602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00036602
         (402 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010274050.1| PREDICTED: uncharacterized RING finger prote...    66   1e-08
ref|XP_010247060.1| PREDICTED: uncharacterized RING finger prote...    60   5e-07
ref|XP_010247057.1| PREDICTED: uncharacterized RING finger prote...    60   5e-07
ref|XP_010247058.1| PREDICTED: uncharacterized RING finger prote...    58   3e-06

>ref|XP_010274050.1| PREDICTED: uncharacterized RING finger protein C548.05c-like
           [Nelumbo nucifera] gi|720057694|ref|XP_010274051.1|
           PREDICTED: uncharacterized RING finger protein
           C548.05c-like [Nelumbo nucifera]
           gi|720057698|ref|XP_010274052.1| PREDICTED:
           uncharacterized RING finger protein C548.05c-like
           [Nelumbo nucifera]
          Length = 230

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 41/96 (42%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = -3

Query: 358 DSESIDDEVVICSPTSFAEARNKARRNRVLIEVLDEETEFRVSHSES--AXXXXXXXXXX 185
           D E+IDDEVVI SP SFAEARNK+RR++ ++ +LDE++E    HSE              
Sbjct: 67  DVEAIDDEVVISSPRSFAEARNKSRRSQGVMVILDEDSEVHQGHSEEPITQLALNSYNKR 126

Query: 184 XXXXXXXXTVNGDLCINLVCDDKTKGKNVAKSLELP 77
                    +N +L INL  +   K KN  KS ELP
Sbjct: 127 RRVPSNQRIINCELYINLEGNHNAKRKNDFKSPELP 162


>ref|XP_010247060.1| PREDICTED: uncharacterized RING finger protein C548.05c-like
           isoform X3 [Nelumbo nucifera]
          Length = 232

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
 Frame = -3

Query: 358 DSESIDDEVVICSPTSFAEARNKARRNRVLIEVLDEETEFRVSHSES--AXXXXXXXXXX 185
           D E+IDD+V+I SP SFAEARNK+RRN+ ++ +LDE++E     SE              
Sbjct: 67  DVEAIDDDVLISSPRSFAEARNKSRRNQGVMVILDEDSEVHQGSSEEPITRLALNSYNKR 126

Query: 184 XXXXXXXXTVNGDLCINLVCDDKTKGKNVAKSLELP 77
                    +N +L INL      K KN  K  ELP
Sbjct: 127 RRVPPNQTIINCELYINLEGSHSAKRKNDVKPPELP 162


>ref|XP_010247057.1| PREDICTED: uncharacterized RING finger protein C548.05c-like
           isoform X1 [Nelumbo nucifera]
          Length = 236

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
 Frame = -3

Query: 358 DSESIDDEVVICSPTSFAEARNKARRNRVLIEVLDEETEFRVSHSES--AXXXXXXXXXX 185
           D E+IDD+V+I SP SFAEARNK+RRN+ ++ +LDE++E     SE              
Sbjct: 67  DVEAIDDDVLISSPRSFAEARNKSRRNQGVMVILDEDSEVHQGSSEEPITRLALNSYNKR 126

Query: 184 XXXXXXXXTVNGDLCINLVCDDKTKGKNVAKSLELP 77
                    +N +L INL      K KN  K  ELP
Sbjct: 127 RRVPPNQTIINCELYINLEGSHSAKRKNDVKPPELP 162


>ref|XP_010247058.1| PREDICTED: uncharacterized RING finger protein C548.05c-like
           isoform X2 [Nelumbo nucifera]
          Length = 233

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
 Frame = -3

Query: 358 DSESIDDEVVICSPTSFAEARNKARRNRVLIEVLDEETEFRVSHSES--AXXXXXXXXXX 185
           D E+IDD+V+I SP SFAEARNK+RRN+ ++ +LDE++E    H E              
Sbjct: 67  DVEAIDDDVLISSPRSFAEARNKSRRNQGVMVILDEDSEV---HQEEPITRLALNSYNKR 123

Query: 184 XXXXXXXXTVNGDLCINLVCDDKTKGKNVAKSLELP 77
                    +N +L INL      K KN  K  ELP
Sbjct: 124 RRVPPNQTIINCELYINLEGSHSAKRKNDVKPPELP 159


Top