BLASTX nr result

ID: Cornus23_contig00036058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00036058
         (281 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013717729.1| PREDICTED: uncharacterized protein LOC106421...    61   3e-07
ref|XP_009140639.1| PREDICTED: uncharacterized protein LOC103864...    61   3e-07
ref|XP_013583479.1| PREDICTED: uncharacterized protein LOC106292...    60   5e-07
emb|CDX71172.1| BnaC07g04510D [Brassica napus]                         60   8e-07
ref|XP_013665256.1| PREDICTED: uncharacterized protein LOC106369...    59   2e-06
ref|XP_013617595.1| PREDICTED: uncharacterized protein LOC106324...    59   2e-06
ref|XP_010468946.1| PREDICTED: uncharacterized protein LOC104749...    59   2e-06
ref|XP_013699633.1| PREDICTED: uncharacterized protein LOC106403...    58   3e-06
ref|XP_013617955.1| PREDICTED: uncharacterized protein LOC106324...    58   3e-06
ref|XP_013658511.1| PREDICTED: uncharacterized protein LOC106363...    57   5e-06
ref|XP_009106506.1| PREDICTED: uncharacterized protein LOC103832...    57   5e-06
ref|XP_010549577.1| PREDICTED: uncharacterized protein LOC104820...    57   7e-06
gb|AAD17416.1| putative non-LTR retroelement reverse transcripta...    57   7e-06
ref|XP_013614126.1| PREDICTED: uncharacterized protein LOC106320...    56   9e-06
ref|XP_013589602.1| PREDICTED: uncharacterized protein LOC106298...    56   9e-06
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    56   9e-06

>ref|XP_013717729.1| PREDICTED: uncharacterized protein LOC106421428 [Brassica napus]
          Length = 200

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 29/79 (36%), Positives = 45/79 (56%)
 Frame = +2

Query: 11  SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
           SFW ++ D  E       +W WRKLL++R LA   +K+ +G+  K  FW +NWL  G L+
Sbjct: 53  SFWDVRDDTME-------SWIWRKLLKMRTLAYQFIKVDIGNGKKSFFWHENWLRIGRLI 105

Query: 191 PRTPSTIVQGSGIPINAKL 247
             T +T  +  G+  NA++
Sbjct: 106 DLTGATSTRYLGVTRNARV 124


>ref|XP_009140639.1| PREDICTED: uncharacterized protein LOC103864625 [Brassica rapa]
          Length = 518

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 33/85 (38%), Positives = 46/85 (54%)
 Frame = +2

Query: 11  SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
           SFW ++ D Q+ S      W WRKLL+LR  A P +K+ V + N   FW DNWL  G L+
Sbjct: 297 SFWDVK-DNQKGS------WIWRKLLKLRDTAYPFLKVAVQNGNDAFFWFDNWLDQGKLI 349

Query: 191 PRTPSTIVQGSGIPINAKLCHFITD 265
             T        G+P NA++   +T+
Sbjct: 350 DITGDAGPMHLGVPRNARVGEVVTN 374


>ref|XP_013583479.1| PREDICTED: uncharacterized protein LOC106292439 [Brassica oleracea
           var. oleracea]
          Length = 513

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 29/85 (34%), Positives = 48/85 (56%)
 Frame = +2

Query: 11  SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
           SFW ++ D          +W WRKLL++R +A   +++ VG+ N   FW D+WL  G L+
Sbjct: 237 SFWDVRDDTLG-------SWIWRKLLKMRDMAYQFIRVEVGNGNCAFFWHDDWLRMGKLI 289

Query: 191 PRTPSTIVQGSGIPINAKLCHFITD 265
             T +T  +  G+P NAK+   +++
Sbjct: 290 NITGATGTRYLGVPRNAKVSDAVSE 314


>emb|CDX71172.1| BnaC07g04510D [Brassica napus]
          Length = 197

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 27/63 (42%), Positives = 37/63 (58%)
 Frame = +2

Query: 74  WRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPINAKLCH 253
           WRKLL+LR LA   +++ V D     FW DNWL  G L+  T +   Q  GIP NA++C 
Sbjct: 75  WRKLLKLRPLAYQFIRMEVKDGKSAFFWFDNWLQLGKLIDITGAVGTQYLGIPCNARVCE 134

Query: 254 FIT 262
            ++
Sbjct: 135 VVS 137


>ref|XP_013665256.1| PREDICTED: uncharacterized protein LOC106369680 [Brassica napus]
          Length = 547

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 30/85 (35%), Positives = 45/85 (52%)
 Frame = +2

Query: 11  SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
           SFW ++ D +        +W  RKLL+LR LA P +K ++ + N   FW DNWL  G ++
Sbjct: 239 SFWDVKEDHKG-------SWIRRKLLKLRDLAYPFMKTKILNGNDAFFWFDNWLGQGKII 291

Query: 191 PRTPSTIVQGSGIPINAKLCHFITD 265
             T        G+P NA++C  + D
Sbjct: 292 DITGDAGTIQYGVPRNARVCDAVRD 316


>ref|XP_013617595.1| PREDICTED: uncharacterized protein LOC106324120 [Brassica oleracea
           var. oleracea]
          Length = 547

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 30/85 (35%), Positives = 45/85 (52%)
 Frame = +2

Query: 11  SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
           SFW ++ D +        +W  RKLL+LR LA P +K ++ + N   FW DNWL  G ++
Sbjct: 239 SFWDVKEDHKG-------SWIRRKLLKLRDLAYPFMKTKILNGNDAFFWFDNWLGQGKII 291

Query: 191 PRTPSTIVQGSGIPINAKLCHFITD 265
             T        G+P NA++C  + D
Sbjct: 292 DITGDAGTIQYGVPRNARVCDAVRD 316


>ref|XP_010468946.1| PREDICTED: uncharacterized protein LOC104749066 [Camelina sativa]
          Length = 198

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/63 (42%), Positives = 35/63 (55%)
 Frame = +2

Query: 59  NETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPIN 238
           N +W WR LL LR LA  L++ ++GD     FW D W P GPL+           GIPIN
Sbjct: 19  NSSWIWRSLLNLRPLAKTLIRCQIGDGTSASFWFDRWSPLGPLIDLLGDNGPVLLGIPIN 78

Query: 239 AKL 247
           A++
Sbjct: 79  AQV 81


>ref|XP_013699633.1| PREDICTED: uncharacterized protein LOC106403339 [Brassica napus]
          Length = 1455

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 27/75 (36%), Positives = 40/75 (53%)
 Frame = +2

Query: 41   EKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQG 220
            E+  K + +W W+ LL LR  A   +  RVG+ N+  FW D W P GPL+        Q 
Sbjct: 1152 EQEQKGHSSWTWKALLSLRNAASAFLMSRVGNGNQTSFWHDVWTPFGPLIRHFGPQGPQE 1211

Query: 221  SGIPINAKLCHFITD 265
             GIP +A++C  + +
Sbjct: 1212 LGIPTDARICSVVNE 1226


>ref|XP_013617955.1| PREDICTED: uncharacterized protein LOC106324550 [Brassica oleracea
            var. oleracea]
          Length = 1593

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 28/85 (32%), Positives = 47/85 (55%)
 Frame = +2

Query: 11   SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
            SFW ++ D          +W WRKLL++R +A   +++ VG+ N   FW  +WL  G L+
Sbjct: 1285 SFWDVRDDTLG-------SWIWRKLLKMRDMAYQFIRVEVGNGNCAFFWHGDWLRMGKLI 1337

Query: 191  PRTPSTIVQGSGIPINAKLCHFITD 265
              T +T  +  G+P NAK+   +++
Sbjct: 1338 NITGATGTRYLGVPRNAKVSDAVSE 1362


>ref|XP_013658511.1| PREDICTED: uncharacterized protein LOC106363284 [Brassica napus]
          Length = 724

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 26/67 (38%), Positives = 38/67 (56%)
 Frame = +2

Query: 65  TWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPINAK 244
           +W WRKLL+ R LA   +++ +G+     FW+D W P G LL  T +   Q  GI  NA+
Sbjct: 427 SWNWRKLLRYRSLAKQYIRMSIGNGQLVRFWTDIWFPKGRLLEITGAFGTQKMGIARNAR 486

Query: 245 LCHFITD 265
           +C  + D
Sbjct: 487 ICDVLVD 493


>ref|XP_009106506.1| PREDICTED: uncharacterized protein LOC103832284 [Brassica rapa]
          Length = 1156

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = +2

Query: 65   TWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPINAK 244
            +W WR L++LR LA P +   V       FW DNW   GP+L  T  T    SGIPI+A 
Sbjct: 846  SWIWRWLMKLRDLARPFLLTNVVSGRNTSFWHDNWTTDGPILSTTGPTGPMVSGIPIDAS 905

Query: 245  LCHFIT--DTNRSS 280
            +   +T  D N SS
Sbjct: 906  VASAVTNGDWNISS 919


>ref|XP_010549577.1| PREDICTED: uncharacterized protein LOC104820715 [Tarenaya
            hassleriana]
          Length = 1919

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 25/59 (42%), Positives = 36/59 (61%)
 Frame = +2

Query: 65   TWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPINA 241
            +W WR+LL++R LA P ++ +VG+     FW D+WLP GPL+        +  GIP NA
Sbjct: 1436 SWAWRRLLKIRPLAYPFLRCQVGNGRSCSFWFDSWLPSGPLINVLCELGPRQLGIPRNA 1494


>gb|AAD17416.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 444

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 29/79 (36%), Positives = 44/79 (55%)
 Frame = +2

Query: 11  SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
           SFW ++ +       +++ W W+ LL LR LA   VK +VG+  K  FW DNW   GPL+
Sbjct: 262 SFWRVEAN-------ISDPWSWKMLLNLRPLAERFVKAKVGNVLKASFWFDNWTYKGPLI 314

Query: 191 PRTPSTIVQGSGIPINAKL 247
               +  ++   IP+NAK+
Sbjct: 315 KLLGNVELRPLRIPLNAKV 333


>ref|XP_013614126.1| PREDICTED: uncharacterized protein LOC106320309 [Brassica oleracea
           var. oleracea]
          Length = 300

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 26/75 (34%), Positives = 40/75 (53%)
 Frame = +2

Query: 41  EKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQG 220
           E+  K + +W W+ LL LR  A   +  RVG+ N+  FW D W P GPL+        + 
Sbjct: 50  EQEQKGHSSWTWKALLSLRNAASAFLMSRVGNGNQTSFWHDVWTPFGPLIRHFGPQGPRE 109

Query: 221 SGIPINAKLCHFITD 265
            GIP +A++C  + +
Sbjct: 110 LGIPTDARICSVVNE 124


>ref|XP_013589602.1| PREDICTED: uncharacterized protein LOC106298041 [Brassica oleracea
           var. oleracea]
          Length = 576

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 26/69 (37%), Positives = 38/69 (55%)
 Frame = +2

Query: 65  TWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPINAK 244
           +W   KL++LR L  P +K+ +G+     FW DNW P G LL    S+ +   GIP++A 
Sbjct: 391 SWLANKLIKLRDLVFPWIKISMGNGQTCRFWYDNWTPFGSLLTYLGSSSISRLGIPLHAT 450

Query: 245 LCHFITDTN 271
           +    TD N
Sbjct: 451 VSSLYTDGN 459


>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 24/59 (40%), Positives = 33/59 (55%)
 Frame = +2

Query: 65  TWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPINA 241
           +W WRKL +LR LA P +   +G      FW DNW   GPL+  T +   +  G+P+NA
Sbjct: 20  SWIWRKLCKLRPLARPFLVCEIGSGETASFWQDNWTGQGPLIDLTGTNGPRSVGMPLNA 78


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