BLASTX nr result
ID: Cornus23_contig00036058
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00036058
(281 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_013717729.1| PREDICTED: uncharacterized protein LOC106421... 61 3e-07
ref|XP_009140639.1| PREDICTED: uncharacterized protein LOC103864... 61 3e-07
ref|XP_013583479.1| PREDICTED: uncharacterized protein LOC106292... 60 5e-07
emb|CDX71172.1| BnaC07g04510D [Brassica napus] 60 8e-07
ref|XP_013665256.1| PREDICTED: uncharacterized protein LOC106369... 59 2e-06
ref|XP_013617595.1| PREDICTED: uncharacterized protein LOC106324... 59 2e-06
ref|XP_010468946.1| PREDICTED: uncharacterized protein LOC104749... 59 2e-06
ref|XP_013699633.1| PREDICTED: uncharacterized protein LOC106403... 58 3e-06
ref|XP_013617955.1| PREDICTED: uncharacterized protein LOC106324... 58 3e-06
ref|XP_013658511.1| PREDICTED: uncharacterized protein LOC106363... 57 5e-06
ref|XP_009106506.1| PREDICTED: uncharacterized protein LOC103832... 57 5e-06
ref|XP_010549577.1| PREDICTED: uncharacterized protein LOC104820... 57 7e-06
gb|AAD17416.1| putative non-LTR retroelement reverse transcripta... 57 7e-06
ref|XP_013614126.1| PREDICTED: uncharacterized protein LOC106320... 56 9e-06
ref|XP_013589602.1| PREDICTED: uncharacterized protein LOC106298... 56 9e-06
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript... 56 9e-06
>ref|XP_013717729.1| PREDICTED: uncharacterized protein LOC106421428 [Brassica napus]
Length = 200
Score = 61.2 bits (147), Expect = 3e-07
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = +2
Query: 11 SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
SFW ++ D E +W WRKLL++R LA +K+ +G+ K FW +NWL G L+
Sbjct: 53 SFWDVRDDTME-------SWIWRKLLKMRTLAYQFIKVDIGNGKKSFFWHENWLRIGRLI 105
Query: 191 PRTPSTIVQGSGIPINAKL 247
T +T + G+ NA++
Sbjct: 106 DLTGATSTRYLGVTRNARV 124
>ref|XP_009140639.1| PREDICTED: uncharacterized protein LOC103864625 [Brassica rapa]
Length = 518
Score = 61.2 bits (147), Expect = 3e-07
Identities = 33/85 (38%), Positives = 46/85 (54%)
Frame = +2
Query: 11 SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
SFW ++ D Q+ S W WRKLL+LR A P +K+ V + N FW DNWL G L+
Sbjct: 297 SFWDVK-DNQKGS------WIWRKLLKLRDTAYPFLKVAVQNGNDAFFWFDNWLDQGKLI 349
Query: 191 PRTPSTIVQGSGIPINAKLCHFITD 265
T G+P NA++ +T+
Sbjct: 350 DITGDAGPMHLGVPRNARVGEVVTN 374
>ref|XP_013583479.1| PREDICTED: uncharacterized protein LOC106292439 [Brassica oleracea
var. oleracea]
Length = 513
Score = 60.5 bits (145), Expect = 5e-07
Identities = 29/85 (34%), Positives = 48/85 (56%)
Frame = +2
Query: 11 SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
SFW ++ D +W WRKLL++R +A +++ VG+ N FW D+WL G L+
Sbjct: 237 SFWDVRDDTLG-------SWIWRKLLKMRDMAYQFIRVEVGNGNCAFFWHDDWLRMGKLI 289
Query: 191 PRTPSTIVQGSGIPINAKLCHFITD 265
T +T + G+P NAK+ +++
Sbjct: 290 NITGATGTRYLGVPRNAKVSDAVSE 314
>emb|CDX71172.1| BnaC07g04510D [Brassica napus]
Length = 197
Score = 59.7 bits (143), Expect = 8e-07
Identities = 27/63 (42%), Positives = 37/63 (58%)
Frame = +2
Query: 74 WRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPINAKLCH 253
WRKLL+LR LA +++ V D FW DNWL G L+ T + Q GIP NA++C
Sbjct: 75 WRKLLKLRPLAYQFIRMEVKDGKSAFFWFDNWLQLGKLIDITGAVGTQYLGIPCNARVCE 134
Query: 254 FIT 262
++
Sbjct: 135 VVS 137
>ref|XP_013665256.1| PREDICTED: uncharacterized protein LOC106369680 [Brassica napus]
Length = 547
Score = 58.5 bits (140), Expect = 2e-06
Identities = 30/85 (35%), Positives = 45/85 (52%)
Frame = +2
Query: 11 SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
SFW ++ D + +W RKLL+LR LA P +K ++ + N FW DNWL G ++
Sbjct: 239 SFWDVKEDHKG-------SWIRRKLLKLRDLAYPFMKTKILNGNDAFFWFDNWLGQGKII 291
Query: 191 PRTPSTIVQGSGIPINAKLCHFITD 265
T G+P NA++C + D
Sbjct: 292 DITGDAGTIQYGVPRNARVCDAVRD 316
>ref|XP_013617595.1| PREDICTED: uncharacterized protein LOC106324120 [Brassica oleracea
var. oleracea]
Length = 547
Score = 58.5 bits (140), Expect = 2e-06
Identities = 30/85 (35%), Positives = 45/85 (52%)
Frame = +2
Query: 11 SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
SFW ++ D + +W RKLL+LR LA P +K ++ + N FW DNWL G ++
Sbjct: 239 SFWDVKEDHKG-------SWIRRKLLKLRDLAYPFMKTKILNGNDAFFWFDNWLGQGKII 291
Query: 191 PRTPSTIVQGSGIPINAKLCHFITD 265
T G+P NA++C + D
Sbjct: 292 DITGDAGTIQYGVPRNARVCDAVRD 316
>ref|XP_010468946.1| PREDICTED: uncharacterized protein LOC104749066 [Camelina sativa]
Length = 198
Score = 58.5 bits (140), Expect = 2e-06
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = +2
Query: 59 NETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPIN 238
N +W WR LL LR LA L++ ++GD FW D W P GPL+ GIPIN
Sbjct: 19 NSSWIWRSLLNLRPLAKTLIRCQIGDGTSASFWFDRWSPLGPLIDLLGDNGPVLLGIPIN 78
Query: 239 AKL 247
A++
Sbjct: 79 AQV 81
>ref|XP_013699633.1| PREDICTED: uncharacterized protein LOC106403339 [Brassica napus]
Length = 1455
Score = 57.8 bits (138), Expect = 3e-06
Identities = 27/75 (36%), Positives = 40/75 (53%)
Frame = +2
Query: 41 EKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQG 220
E+ K + +W W+ LL LR A + RVG+ N+ FW D W P GPL+ Q
Sbjct: 1152 EQEQKGHSSWTWKALLSLRNAASAFLMSRVGNGNQTSFWHDVWTPFGPLIRHFGPQGPQE 1211
Query: 221 SGIPINAKLCHFITD 265
GIP +A++C + +
Sbjct: 1212 LGIPTDARICSVVNE 1226
>ref|XP_013617955.1| PREDICTED: uncharacterized protein LOC106324550 [Brassica oleracea
var. oleracea]
Length = 1593
Score = 57.8 bits (138), Expect = 3e-06
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = +2
Query: 11 SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
SFW ++ D +W WRKLL++R +A +++ VG+ N FW +WL G L+
Sbjct: 1285 SFWDVRDDTLG-------SWIWRKLLKMRDMAYQFIRVEVGNGNCAFFWHGDWLRMGKLI 1337
Query: 191 PRTPSTIVQGSGIPINAKLCHFITD 265
T +T + G+P NAK+ +++
Sbjct: 1338 NITGATGTRYLGVPRNAKVSDAVSE 1362
>ref|XP_013658511.1| PREDICTED: uncharacterized protein LOC106363284 [Brassica napus]
Length = 724
Score = 57.0 bits (136), Expect = 5e-06
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +2
Query: 65 TWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPINAK 244
+W WRKLL+ R LA +++ +G+ FW+D W P G LL T + Q GI NA+
Sbjct: 427 SWNWRKLLRYRSLAKQYIRMSIGNGQLVRFWTDIWFPKGRLLEITGAFGTQKMGIARNAR 486
Query: 245 LCHFITD 265
+C + D
Sbjct: 487 ICDVLVD 493
>ref|XP_009106506.1| PREDICTED: uncharacterized protein LOC103832284 [Brassica rapa]
Length = 1156
Score = 57.0 bits (136), Expect = 5e-06
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 65 TWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPINAK 244
+W WR L++LR LA P + V FW DNW GP+L T T SGIPI+A
Sbjct: 846 SWIWRWLMKLRDLARPFLLTNVVSGRNTSFWHDNWTTDGPILSTTGPTGPMVSGIPIDAS 905
Query: 245 LCHFIT--DTNRSS 280
+ +T D N SS
Sbjct: 906 VASAVTNGDWNISS 919
>ref|XP_010549577.1| PREDICTED: uncharacterized protein LOC104820715 [Tarenaya
hassleriana]
Length = 1919
Score = 56.6 bits (135), Expect = 7e-06
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +2
Query: 65 TWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPINA 241
+W WR+LL++R LA P ++ +VG+ FW D+WLP GPL+ + GIP NA
Sbjct: 1436 SWAWRRLLKIRPLAYPFLRCQVGNGRSCSFWFDSWLPSGPLINVLCELGPRQLGIPRNA 1494
>gb|AAD17416.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 444
Score = 56.6 bits (135), Expect = 7e-06
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +2
Query: 11 SFWPIQ*DLQEKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLL 190
SFW ++ + +++ W W+ LL LR LA VK +VG+ K FW DNW GPL+
Sbjct: 262 SFWRVEAN-------ISDPWSWKMLLNLRPLAERFVKAKVGNVLKASFWFDNWTYKGPLI 314
Query: 191 PRTPSTIVQGSGIPINAKL 247
+ ++ IP+NAK+
Sbjct: 315 KLLGNVELRPLRIPLNAKV 333
>ref|XP_013614126.1| PREDICTED: uncharacterized protein LOC106320309 [Brassica oleracea
var. oleracea]
Length = 300
Score = 56.2 bits (134), Expect = 9e-06
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +2
Query: 41 EKS*KVNETWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQG 220
E+ K + +W W+ LL LR A + RVG+ N+ FW D W P GPL+ +
Sbjct: 50 EQEQKGHSSWTWKALLSLRNAASAFLMSRVGNGNQTSFWHDVWTPFGPLIRHFGPQGPRE 109
Query: 221 SGIPINAKLCHFITD 265
GIP +A++C + +
Sbjct: 110 LGIPTDARICSVVNE 124
>ref|XP_013589602.1| PREDICTED: uncharacterized protein LOC106298041 [Brassica oleracea
var. oleracea]
Length = 576
Score = 56.2 bits (134), Expect = 9e-06
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +2
Query: 65 TWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPINAK 244
+W KL++LR L P +K+ +G+ FW DNW P G LL S+ + GIP++A
Sbjct: 391 SWLANKLIKLRDLVFPWIKISMGNGQTCRFWYDNWTPFGSLLTYLGSSSISRLGIPLHAT 450
Query: 245 LCHFITDTN 271
+ TD N
Sbjct: 451 VSSLYTDGN 459
>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 323
Score = 56.2 bits (134), Expect = 9e-06
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +2
Query: 65 TWCWRKLLQLRGLALPLVKLRVGDSNKGLFWSDNWLPGGPLLPRTPSTIVQGSGIPINA 241
+W WRKL +LR LA P + +G FW DNW GPL+ T + + G+P+NA
Sbjct: 20 SWIWRKLCKLRPLARPFLVCEIGSGETASFWQDNWTGQGPLIDLTGTNGPRSVGMPLNA 78