BLASTX nr result
ID: Cornus23_contig00035898
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00035898
(385 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31710.3| unnamed protein product [Vitis vinifera] 168 1e-39
ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi... 168 1e-39
emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera] 168 1e-39
ref|XP_010242634.1| PREDICTED: pentatricopeptide repeat-containi... 147 3e-33
ref|XP_010923157.1| PREDICTED: pentatricopeptide repeat-containi... 147 4e-33
ref|XP_008785452.1| PREDICTED: pentatricopeptide repeat-containi... 136 7e-30
ref|XP_009421324.1| PREDICTED: pentatricopeptide repeat-containi... 131 2e-28
ref|XP_011100606.1| PREDICTED: pentatricopeptide repeat-containi... 129 9e-28
ref|XP_010260747.1| PREDICTED: pentatricopeptide repeat-containi... 127 3e-27
ref|XP_010260746.1| PREDICTED: pentatricopeptide repeat-containi... 127 3e-27
gb|KDO59708.1| hypothetical protein CISIN_1g003439mg [Citrus sin... 127 4e-27
gb|KDO59707.1| hypothetical protein CISIN_1g003439mg [Citrus sin... 127 4e-27
ref|XP_010051803.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 126 7e-27
gb|KNA23285.1| hypothetical protein SOVF_026300 [Spinacia oleracea] 125 1e-26
ref|XP_008781925.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 125 1e-26
ref|XP_006469116.1| PREDICTED: uncharacterized protein LOC102612... 125 1e-26
gb|KDO77215.1| hypothetical protein CISIN_1g002772mg [Citrus sin... 125 1e-26
ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containi... 125 1e-26
ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citr... 125 1e-26
ref|XP_006446876.1| hypothetical protein CICLE_v10017898mg [Citr... 125 1e-26
>emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 168 bits (426), Expect = 1e-39
Identities = 80/96 (83%), Positives = 86/96 (89%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
+ K+GYVPD+SC LQNVEEED E+FLYS SERLAITFALLN P STIQIVKNLRVCAD
Sbjct: 552 KMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCAD 611
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CHTTTKFISKIT+ RIIVRDATRFHHFEDG+CSC D
Sbjct: 612 CHTTTKFISKITTRRIIVRDATRFHHFEDGICSCND 647
>ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620
[Vitis vinifera] gi|731413114|ref|XP_010658599.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g39620 [Vitis vinifera]
gi|731413117|ref|XP_010658600.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g39620
[Vitis vinifera]
Length = 1005
Score = 168 bits (426), Expect = 1e-39
Identities = 80/96 (83%), Positives = 86/96 (89%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
+ K+GYVPD+SC LQNVEEED E+FLYS SERLAITFALLN P STIQIVKNLRVCAD
Sbjct: 908 KMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCAD 967
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CHTTTKFISKIT+ RIIVRDATRFHHFEDG+CSC D
Sbjct: 968 CHTTTKFISKITTRRIIVRDATRFHHFEDGICSCND 1003
>emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 168 bits (426), Expect = 1e-39
Identities = 80/96 (83%), Positives = 86/96 (89%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
+ K+GYVPD+SC LQNVEEED E+FLYS SERLAITFALLN P STIQIVKNLRVCAD
Sbjct: 908 KMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCAD 967
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CHTTTKFISKIT+ RIIVRDATRFHHFEDG+CSC D
Sbjct: 968 CHTTTKFISKITTRRIIVRDATRFHHFEDGICSCND 1003
>ref|XP_010242634.1| PREDICTED: pentatricopeptide repeat-containing protein At2g39620
[Nelumbo nucifera]
Length = 1005
Score = 147 bits (371), Expect = 3e-33
Identities = 71/96 (73%), Positives = 76/96 (79%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
+ KMGYVPD +C L NVEEE+ E FLYS SERLAI FALLN P TIQIVKNLRVC D
Sbjct: 908 KMEKMGYVPDTTCVLHNVEEEEKESFLYSHSERLAIAFALLNTGPGMTIQIVKNLRVCPD 967
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CHTTTK ISKIT RIIVRD +RFHHFE+G CSC D
Sbjct: 968 CHTTTKLISKITGRRIIVRDGSRFHHFENGACSCKD 1003
>ref|XP_010923157.1| PREDICTED: pentatricopeptide repeat-containing protein At2g39620
[Elaeis guineensis]
Length = 1006
Score = 147 bits (370), Expect = 4e-33
Identities = 68/98 (69%), Positives = 79/98 (80%)
Frame = -1
Query: 373 FRRWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVC 194
F + KMGYVPD S L NVEEE+ FL+ SERLAI+FALLN EP TIQI+KNLRVC
Sbjct: 907 FEKMEKMGYVPDTSSVLHNVEEEEKLSFLHGHSERLAISFALLNTEPGMTIQIIKNLRVC 966
Query: 193 ADCHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
DCHT TK +SKIT+H+IIVRD++RFHHFEDG+CSC D
Sbjct: 967 GDCHTVTKLVSKITNHKIIVRDSSRFHHFEDGICSCKD 1004
>ref|XP_008785452.1| PREDICTED: pentatricopeptide repeat-containing protein At2g39620
[Phoenix dactylifera]
Length = 1007
Score = 136 bits (342), Expect = 7e-30
Identities = 64/96 (66%), Positives = 75/96 (78%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
+ MGYV D S L NVEEE+ FL+ SERLAI+FALL+ EP TIQI+KNLRVC D
Sbjct: 910 KMENMGYVADTSSVLHNVEEEEKLSFLHGHSERLAISFALLSTEPGMTIQIIKNLRVCGD 969
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CHT TK +SKIT+ +IIVRD+TRFHHFEDG+CSC D
Sbjct: 970 CHTVTKLVSKITNRKIIVRDSTRFHHFEDGICSCKD 1005
>ref|XP_009421324.1| PREDICTED: pentatricopeptide repeat-containing protein At2g39620
[Musa acuminata subsp. malaccensis]
Length = 1005
Score = 131 bits (330), Expect = 2e-28
Identities = 63/96 (65%), Positives = 74/96 (77%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
+ KMGYVPD S + NVEEE+ E FL S SERLAI FALL+ EP TIQIVKNLRVC D
Sbjct: 908 KMEKMGYVPDTSSVMHNVEEEEKESFLSSHSERLAICFALLSTEPGMTIQIVKNLRVCGD 967
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CHT KF+S+I + IIVRD++RFHHF +G+CSC D
Sbjct: 968 CHTVFKFVSEIANREIIVRDSSRFHHFCNGICSCKD 1003
>ref|XP_011100606.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Sesamum indicum]
Length = 877
Score = 129 bits (324), Expect = 9e-28
Identities = 60/98 (61%), Positives = 70/98 (71%)
Frame = -1
Query: 373 FRRWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVC 194
F R +K GYVPD SC L NV+E++ E L SERLAI F LLN P +TI++ KNLRVC
Sbjct: 778 FTRMKKEGYVPDTSCVLHNVDEQEKENLLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVC 837
Query: 193 ADCHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
DCH+ TKFISKI I+VRD RFHHF+DG CSC D
Sbjct: 838 NDCHSATKFISKIVDREIVVRDVRRFHHFKDGACSCGD 875
>ref|XP_010260747.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic isoform X2 [Nelumbo nucifera]
Length = 896
Score = 127 bits (320), Expect = 3e-27
Identities = 60/96 (62%), Positives = 67/96 (69%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
R RK GYVPD SC L NV+EE+ E L SERLAI F +LN P +TI++ KNLRVC D
Sbjct: 799 RLRKEGYVPDTSCVLHNVDEEEKEYLLCGHSERLAIAFGILNTPPGTTIRVTKNLRVCND 858
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CH TKFISKI IIVRD RFHHF +G CSC D
Sbjct: 859 CHVATKFISKIVEREIIVRDVRRFHHFREGFCSCGD 894
>ref|XP_010260746.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic isoform X1 [Nelumbo nucifera]
Length = 902
Score = 127 bits (320), Expect = 3e-27
Identities = 60/96 (62%), Positives = 67/96 (69%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
R RK GYVPD SC L NV+EE+ E L SERLAI F +LN P +TI++ KNLRVC D
Sbjct: 799 RLRKEGYVPDTSCVLHNVDEEEKEYLLCGHSERLAIAFGILNTPPGTTIRVTKNLRVCND 858
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CH TKFISKI IIVRD RFHHF +G CSC D
Sbjct: 859 CHVATKFISKIVEREIIVRDVRRFHHFREGFCSCGD 894
>gb|KDO59708.1| hypothetical protein CISIN_1g003439mg [Citrus sinensis]
Length = 705
Score = 127 bits (318), Expect = 4e-27
Identities = 59/96 (61%), Positives = 73/96 (76%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
+ + +GYVPDKS LQ+VEE++ E L S SERLAI F +++ P+S IQI KNLRVC D
Sbjct: 608 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 667
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CH TKFIS+IT IIVRD+ RFHHF+DG+CSC D
Sbjct: 668 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 703
>gb|KDO59707.1| hypothetical protein CISIN_1g003439mg [Citrus sinensis]
Length = 820
Score = 127 bits (318), Expect = 4e-27
Identities = 59/96 (61%), Positives = 73/96 (76%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
+ + +GYVPDKS LQ+VEE++ E L S SERLAI F +++ P+S IQI KNLRVC D
Sbjct: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CH TKFIS+IT IIVRD+ RFHHF+DG+CSC D
Sbjct: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
>ref|XP_010051803.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Eucalyptus
grandis]
Length = 893
Score = 126 bits (316), Expect = 7e-27
Identities = 60/96 (62%), Positives = 66/96 (68%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
R RK GYVPD SC L NV EE+ E L SE+LAI F +LN P TI++ KNLRVC D
Sbjct: 796 RMRKEGYVPDTSCVLHNVXEEEKEALLCGHSEKLAIAFGILNTPPGMTIRVAKNLRVCND 855
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CHT TKFISKI II+RD RFHHF DG CSC D
Sbjct: 856 CHTATKFISKIEEREIILRDVRRFHHFRDGKCSCGD 891
>gb|KNA23285.1| hypothetical protein SOVF_026300 [Spinacia oleracea]
Length = 896
Score = 125 bits (315), Expect = 1e-26
Identities = 58/96 (60%), Positives = 69/96 (71%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
R +K GYVPD SC L N++EE+ E L SE+LAI F +LN P TI++ KNLRVC D
Sbjct: 799 RMKKEGYVPDTSCVLHNLDEEEKESLLCGHSEKLAIAFGILNTPPGRTIRVSKNLRVCND 858
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CHT TKFISKI II+RD RFHHF+DG+CSC D
Sbjct: 859 CHTATKFISKIEKREIILRDVRRFHHFKDGICSCGD 894
>ref|XP_008781925.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Phoenix
dactylifera]
Length = 882
Score = 125 bits (315), Expect = 1e-26
Identities = 57/96 (59%), Positives = 70/96 (72%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
R RK GY PD SC L +VEEE+ E+ L SE+LAI F +LN P STI++ KNLRVC D
Sbjct: 785 RMRKEGYKPDTSCVLHDVEEEEKEVLLCGHSEKLAIAFGILNTPPGSTIRVAKNLRVCND 844
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CH TKFISK+ +I++RD RFHHF+DG+CSC D
Sbjct: 845 CHEATKFISKLVGRQIVLRDMRRFHHFKDGICSCGD 880
>ref|XP_006469116.1| PREDICTED: uncharacterized protein LOC102612526 [Citrus sinensis]
Length = 1508
Score = 125 bits (315), Expect = 1e-26
Identities = 62/96 (64%), Positives = 69/96 (71%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
R R+ GY PD + AL +VEEE E LY SE+LAI F LLN P S I+I KNLRVC D
Sbjct: 1075 RIRREGYTPDLNFALHDVEEETKEKMLYVHSEKLAIVFGLLNSGPGSAIRIKKNLRVCGD 1134
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CHT TKFISK+T IIVRDA RFHHF+DG CSC D
Sbjct: 1135 CHTATKFISKVTGREIIVRDAHRFHHFKDGTCSCGD 1170
>gb|KDO77215.1| hypothetical protein CISIN_1g002772mg [Citrus sinensis]
Length = 882
Score = 125 bits (314), Expect = 1e-26
Identities = 59/96 (61%), Positives = 68/96 (70%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
R RK GYVPD SC L NV EE+ E L SE+LAI F +LN P +TI++ KNLRVC D
Sbjct: 785 RMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CH TKFISKI S II+RD RFHHF++G CSC D
Sbjct: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
>ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Citrus sinensis]
Length = 882
Score = 125 bits (314), Expect = 1e-26
Identities = 59/96 (61%), Positives = 68/96 (70%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
R RK GYVPD SC L NV EE+ E L SE+LAI F +LN P +TI++ KNLRVC D
Sbjct: 785 RMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CH TKFISKI S II+RD RFHHF++G CSC D
Sbjct: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
>ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citrus clementina]
gi|557551206|gb|ESR61835.1| hypothetical protein
CICLE_v10014221mg [Citrus clementina]
Length = 882
Score = 125 bits (314), Expect = 1e-26
Identities = 59/96 (61%), Positives = 68/96 (70%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
R RK GYVPD SC L NV EE+ E L SE+LAI F +LN P +TI++ KNLRVC D
Sbjct: 785 RMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 844
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CH TKFISKI S II+RD RFHHF++G CSC D
Sbjct: 845 CHQATKFISKIESREIILRDVRRFHHFKNGTCSCGD 880
>ref|XP_006446876.1| hypothetical protein CICLE_v10017898mg [Citrus clementina]
gi|557549487|gb|ESR60116.1| hypothetical protein
CICLE_v10017898mg [Citrus clementina]
Length = 714
Score = 125 bits (314), Expect = 1e-26
Identities = 61/96 (63%), Positives = 69/96 (71%)
Frame = -1
Query: 367 RWRKMGYVPDKSCALQNVEEED*ELFLYSRSERLAITFALLNREPESTIQIVKNLRVCAD 188
R R+ GY PD + AL +VEEE E LY SE+LAI F LLN P S I+I KNLRVC D
Sbjct: 617 RIRREGYTPDLNFALHDVEEETKEKMLYVHSEKLAIVFGLLNSGPGSAIRIKKNLRVCGD 676
Query: 187 CHTTTKFISKITSHRIIVRDATRFHHFEDGLCSCTD 80
CHT TKFISK+T I+VRDA RFHHF+DG CSC D
Sbjct: 677 CHTATKFISKVTGREIVVRDAHRFHHFKDGTCSCGD 712