BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00035657
         (501 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]    85   2e-14
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]    83   7e-14
ref|XP_010108259.1| Retrovirus-related Pol polyprotein from tran...    81   3e-13
emb|CAN70080.1| hypothetical protein VITISV_041970 [Vitis vinifera]    71   3e-13
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]    79   1e-12
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]    79   2e-12
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]          79   2e-12
emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]    67   2e-12
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...    78   2e-12
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]      78   2e-12
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...    78   3e-12
emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]          60   6e-12
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja...    77   6e-12
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc...    77   6e-12
emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group] gi...    77   6e-12
emb|CAN82049.1| hypothetical protein VITISV_000536 [Vitis vinifera]    62   2e-11
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...    75   2e-11
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...    75   2e-11
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]      75   2e-11
gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subc...    59   4e-11

>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
          Length = 633

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 44/90 (48%), Positives = 59/90 (65%)
 Frame = -1

Query: 276 VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIKESTMLKLSHQ*PCLIKFIWTLLAI 97
           V PIGCKW+YK KRGI+   + YKA  + K     KE    + +     ++K I  LL+I
Sbjct: 151 VKPIGCKWIYKKKRGIDGKXZTYKAXLVAKGYTQ-KEGIDYEETFSPVAMLKSIRILLSI 209

Query: 96  SAHFDYEIWEMNVKMTFLNGHLDKDIYIKQ 7
           +A+FDYEIW+M+VK  FLNG LD+ IY+KQ
Sbjct: 210 AAYFDYEIWQMDVKTAFLNGSLDECIYMKQ 239



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 47/116 (40%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
 Frame = -3

Query: 463 RSPNRYMFWR*SFEVVPDKHESDPDNYKEAISDIDVSY*QVAM*SELDSMYSNQVWELIE 284
           R P RY     +F+ +P++  ++P  Y +A+ D D     VAM SE++SMYSNQVWEL+E
Sbjct: 87  RPPVRYTXLGEAFDRIPEEVNTEPVCYDDALQDKDADKWLVAMKSEMESMYSNQVWELVE 146

Query: 283 PLGRTNWM*VGL*VKKR----NRRE**NIQSRLVAKSIT*YKRIDYVETFSPVAML 128
           P      +      KK+     + +    ++ LVAK  T  + IDY ETFSPVAML
Sbjct: 147 PPKGVKPIGCKWIYKKKRGIDGKXZ--TYKAXLVAKGYTQKEGIDYEETFSPVAML 200


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 44/90 (48%), Positives = 59/90 (65%)
 Frame = -1

Query: 276  VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIKESTMLKLSHQ*PCLIKFIWTLLAI 97
            V PIGCKW+YK KRGI+   + YKA  + K     KE    + +     ++K I  LL+I
Sbjct: 829  VKPIGCKWIYKKKRGIDGKVQTYKAKLVAKGYTQ-KEGIDYEETFSPVAMLKSIRILLSI 887

Query: 96   SAHFDYEIWEMNVKMTFLNGHLDKDIYIKQ 7
            +A+FDYEIW+M+VK  FLNG LD+ IY+KQ
Sbjct: 888  AAYFDYEIWQMDVKTAFLNGSLDECIYMKQ 917


>ref|XP_010108259.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis] gi|587931412|gb|EXC18499.1|
           Retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Morus notabilis]
          Length = 414

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 43/90 (47%), Positives = 58/90 (64%)
 Frame = -1

Query: 276 VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIKESTMLKLSHQ*PCLIKFIWTLLAI 97
           V PI CKW+YK KRG++   E YKA  + K     KE    + +     ++K I  LLAI
Sbjct: 323 VKPIRCKWIYKRKRGVDGKVETYKARLVAKGYTQ-KEGVDYEETFSPVAMLKSIRILLAI 381

Query: 96  SAHFDYEIWEMNVKMTFLNGHLDKDIYIKQ 7
           +A+FDYEIW+M+VK  FLNG+LD+ IY+ Q
Sbjct: 382 AAYFDYEIWQMDVKTPFLNGYLDETIYMDQ 411



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
 Frame = -3

Query: 421 VVPDKHESDPDNYKEAISDIDVSY*QVAM*SELDSMYSNQVWELIE-PLG----RTNWM* 257
           V  D  + DP  +++A+ D +    Q AM  E++SM+SN VW+L++ P G    R  W  
Sbjct: 273 VTADDGKEDPSTFRDAMDDSNKEEWQAAMKLEIESMHSNSVWQLVDLPEGVKPIRCKW-- 330

Query: 256 VGL*VKKRNRRE**NIQ---SRLVAKSIT*YKRIDYVETFSPVAML 128
               + KR R     ++   +RLVAK  T  + +DY ETFSPVAML
Sbjct: 331 ----IYKRKRGVDGKVETYKARLVAKGYTQKEGVDYEETFSPVAML 372


>emb|CAN70080.1| hypothetical protein VITISV_041970 [Vitis vinifera]
          Length = 121

 Score = 71.2 bits (173), Expect(2) = 3e-13
 Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
 Frame = -1

Query: 276 VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIKESTMLKLSHQ*PCLI---KFIWTL 106
           + PIGCKW YK  +G++   E YKA  + K       S  L   ++   L+   KFI  L
Sbjct: 35  IKPIGCKWAYKRNKGVDGRVETYKARLVVKGY-----SXKLGFKYEDNLLVAMLKFIRIL 89

Query: 105 LAISAHFDYEIWEMNVKMTFLNGHLDKDIYI 13
           L+I+ H DYEIW+M+VK TF N +LD+ IY+
Sbjct: 90  LSIATHLDYEIWQMDVKTTFSNDNLDESIYM 120



 Score = 30.4 bits (67), Expect(2) = 3e-13
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -3

Query: 373 ISDIDVSY*QVAM*SELDSMYSNQVWELIE 284
           +SD D    Q A+  +L+SMY NQVWE ++
Sbjct: 1   MSDADAHIWQRAVEVKLESMYFNQVWEFVK 30


>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
          Length = 961

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 41/90 (45%), Positives = 58/90 (64%)
 Frame = -1

Query: 276 VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIKESTMLKLSHQ*PCLIKFIWTLLAI 97
           + PIGCKW+YK KRG     E +KA  + K     KE    + +     ++K I  LL+I
Sbjct: 622 IKPIGCKWIYKRKRGPNGKVETFKARLVAKGFTQ-KEGVDYEDTFSPVAMLKSIRILLSI 680

Query: 96  SAHFDYEIWEMNVKMTFLNGHLDKDIYIKQ 7
           +A++DYEIW+M+VK TFLNGHL++ IY+ Q
Sbjct: 681 AAYYDYEIWQMDVKTTFLNGHLEETIYMVQ 710



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
 Frame = -3

Query: 463 RSPNRYMFWR*SFEVVPDKHESDPDNYKEAISDIDVSY*QVAM*SELDSMYSNQVWEL-- 290
           R P RY     +   V D  + D   +K A+ D+D    Q AM  E++SMYSN VWEL  
Sbjct: 558 RLPIRYCENGEAQVAVTDGSDDDSLTFKMAMDDVDRETWQEAMKLEIESMYSNSVWELVD 617

Query: 289 ----IEPLGRTNWM*VGL*VKKRNRRE**NIQ---SRLVAKSIT*YKRIDYVETFSPVAM 131
               I+P+G   W      + KR R     ++   +RLVAK  T  + +DY +TFSPVAM
Sbjct: 618 LPEGIKPIG-CKW------IYKRKRGPNGKVETFKARLVAKGFTQKEGVDYEDTFSPVAM 670

Query: 130 L 128
           L
Sbjct: 671 L 671


>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
          Length = 668

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 41/91 (45%), Positives = 57/91 (62%)
 Frame = -1

Query: 276 VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIKESTMLKLSHQ*PCLIKFIWTLLAI 97
           + PIGCKW+YK KRG     E +KA  + K     KE    + +     ++K I  LL+I
Sbjct: 186 IKPIGCKWIYKXKRGPNGKVETFKARLVAKGFTQ-KEGVDYEDTFSPVXMLKSIRILLSI 244

Query: 96  SAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
            A++DYEIW+M+VK  FLNGHL++ IY+ QP
Sbjct: 245 XAYYDYEIWQMDVKTXFLNGHLEETIYMVQP 275



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
 Frame = -3

Query: 463 RSPNRYMFWR*SFEVVPDKHESDPDNYKEAISDIDVSY*QVAM*SELDSMYSNQVWEL-- 290
           R P RY     +   V D  + DP  +K A+ D+D    Q AM  E++SMYSN VW+L  
Sbjct: 122 RLPIRYRENGEAQVAVTDGSDDDPLTFKMAMDDVDREKWQEAMKLEIESMYSNSVWKLVD 181

Query: 289 ----IEPLGRTNWM*VGL*VKKRNRRE**NIQSRLVAKSIT*YKRIDYVETFSPVAML 128
               I+P+G   W+      K+    +    ++RLVAK  T  + +DY +TFSPV ML
Sbjct: 182 LPEGIKPIG-CKWI---YKXKRGPNGKVETFKARLVAKGFTQKEGVDYEDTFSPVXML 235


>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
 Frame = -1

Query: 276 VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIK----ESTMLKLSHQ*PCLIKFIWT 109
           V  I CKWV+K K  I+ N  +YKA  + K  R I+    + T   ++     ++K I  
Sbjct: 719 VKAIECKWVFKKKIDIDGNVHMYKAQLVAKGFRQIQGVDYDETFSPIA-----MLKSIRI 773

Query: 108 LLAISAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
           +LAI+A+FDYEIW+M+VK+ FLNG+LD+D+Y+ QP
Sbjct: 774 VLAIAAYFDYEIWQMDVKIAFLNGNLDEDVYMTQP 808


>emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]
          Length = 1180

 Score = 66.6 bits (161), Expect(2) = 2e-12
 Identities = 36/89 (40%), Positives = 51/89 (57%)
 Frame = -1

Query: 270  PIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIKESTMLKLSHQ*PCLIKFIWTLLAISA 91
            P+GCKWV+K KR  + N E +KA  + K S  I                     ++A+ A
Sbjct: 818  PVGCKWVFKTKRDAKGNIERFKARLVAKDSLRI---------------------IMALVA 856

Query: 90   HFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
            HFD E+ +M+VK  FLNG+LD+DIY++QP
Sbjct: 857  HFDLELHQMDVKTAFLNGNLDEDIYMEQP 885



 Score = 32.0 bits (71), Expect(2) = 2e-12
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -3

Query: 397 DPDNYKEAISDIDVSY*QVAM*SELDSMYSNQVWELIE 284
           DP ++ +A+   D S    AM  EL SM  N VW+LIE
Sbjct: 774 DPVSFSQAMESDDSSKWMEAMNEELKSMAHNGVWDLIE 811


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 41/92 (44%), Positives = 60/92 (65%), Gaps = 4/92 (4%)
 Frame = -1

Query: 267  IGCKWVYK*KRGIEENDEIYKAD*LQKASRNIK----ESTMLKLSHQ*PCLIKFIWTLLA 100
            I CKW +K K  ++ N  IYKA  + K  R I+    + T L ++     ++K I  +LA
Sbjct: 762  IECKWFFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFLPVA-----MLKSIRIVLA 816

Query: 99   ISAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
            I+A+FDYEIW+M+VK  FLNG+LD+D+Y+ QP
Sbjct: 817  IAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQP 848


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 41/92 (44%), Positives = 60/92 (65%), Gaps = 4/92 (4%)
 Frame = -1

Query: 267 IGCKWVYK*KRGIEENDEIYKAD*LQKASRNIK----ESTMLKLSHQ*PCLIKFIWTLLA 100
           I CKW +K K  ++ N  IYKA  + K  R I+    + T L ++     ++K I  +LA
Sbjct: 704 IECKWFFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFLPVA-----MLKSIRIVLA 758

Query: 99  ISAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
           I+A+FDYEIW+M+VK  FLNG+LD+D+Y+ QP
Sbjct: 759 IAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQP 790


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
 Frame = -1

Query: 276 VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIK----ESTMLKLSHQ*PCLIKFIWT 109
           V  I CKWV+K K  ++ N  IYKA  + K  R I+    + T    +     ++K I  
Sbjct: 621 VKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPFA-----MLKSIRI 675

Query: 108 LLAISAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
           +LAI+A+F+YEIW+M+VK TFLNG+LD+D+Y+ QP
Sbjct: 676 VLAIAAYFNYEIWQMDVKTTFLNGNLDEDVYMTQP 710


>emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]
          Length = 746

 Score = 60.1 bits (144), Expect(2) = 6e-12
 Identities = 25/42 (59%), Positives = 36/42 (85%)
 Frame = -1

Query: 129 LIKFIWTLLAISAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
           ++K I  +LAI+A+FDYEIW+M+VK  FLNG+LD+D+Y+ QP
Sbjct: 493 MLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQP 534



 Score = 37.0 bits (84), Expect(2) = 6e-12
 Identities = 30/112 (26%), Positives = 42/112 (37%)
 Frame = -3

Query: 463 RSPNRYMFWR*SFEVVPDKHESDPDNYKEAISDIDVSY*QVAM*SELDSMYSNQVWELIE 284
           R+P RY         +      +P  Y+E +   D      AM SE++SM+ NQVW L++
Sbjct: 412 RTPARYALLTTGQHDILLLDNDEPTTYEETMVGPDSEKWLGAMKSEIESMHVNQVWNLVD 471

Query: 283 PLGRTNWM*VGL*VKKRNRRE**NIQSRLVAKSIT*YKRIDYVETFSPVAML 128
           P                                    + +DY ETFSPV ML
Sbjct: 472 P-----------------------------PDGFRQIQGVDYDETFSPVTML 494


>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 700

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 40/91 (43%), Positives = 58/91 (63%)
 Frame = -1

Query: 276 VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIKESTMLKLSHQ*PCLIKFIWTLLAI 97
           V  I CKWV+K K  ++ N  IYKA  + K  R I +      +     ++K I  +LAI
Sbjct: 390 VKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQI-QGVNYDETFSPVAMLKSIRIVLAI 448

Query: 96  SAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
           +A+FDYEIW+M+VK  FL+G+LD+D+Y+ QP
Sbjct: 449 AAYFDYEIWQMDVKTAFLSGNLDEDVYMTQP 479


>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 655

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 40/91 (43%), Positives = 58/91 (63%)
 Frame = -1

Query: 276 VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIKESTMLKLSHQ*PCLIKFIWTLLAI 97
           V  I CKWV+K K  ++ N  IYKA  + K  R I +      +     ++K I  +LAI
Sbjct: 345 VKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQI-QGVNYDETFSPVAMLKSIRIVLAI 403

Query: 96  SAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
           +A+FDYEIW+M+VK  FL+G+LD+D+Y+ QP
Sbjct: 404 AAYFDYEIWQMDVKTAFLSGNLDEDVYMTQP 434


>emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group]
           gi|38347202|emb|CAD40526.2| OSJNBa0023J03.14 [Oryza
           sativa Japonica Group] gi|116308930|emb|CAH66059.1|
           OSIGBa0125J07.8 [Oryza sativa Indica Group]
           gi|116309043|emb|CAH66155.1| OSIGBa0113B06.1 [Oryza
           sativa Indica Group]
          Length = 704

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
 Frame = -1

Query: 276 VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIK----ESTMLKLSHQ*PCLIKFIWT 109
           V  I CKWV+K K  ++ N  IYKA  + K  R I+    + T   ++     ++K I  
Sbjct: 342 VKAIECKWVFKKKIDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVA-----ILKSIRI 396

Query: 108 LLAISAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
           +LAI+A+FDYEIW+M+VK  FLNG+LD+D+Y  QP
Sbjct: 397 VLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYTTQP 431


>emb|CAN82049.1| hypothetical protein VITISV_000536 [Vitis vinifera]
          Length = 1077

 Score = 62.4 bits (150), Expect(2) = 2e-11
 Identities = 35/93 (37%), Positives = 49/93 (52%)
 Frame = -1

Query: 282 HLVGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIKESTMLKLSHQ*PCLIKFIWTLL 103
           H   P+GCKWV+K KR      E YKA  + K S  +                     ++
Sbjct: 411 HGCKPVGCKWVFKTKRDSSGRIERYKARLVVKDSFRV---------------------IM 449

Query: 102 AISAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
           AI AHFD E+ +M+V+ TFLNG LD+D+Y++ P
Sbjct: 450 AILAHFDLELHQMDVQTTFLNGDLDEDVYMEHP 482



 Score = 33.1 bits (74), Expect(2) = 2e-11
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 400 SDPDNYKEAISDIDVSY*QVAM*SELDSMYSNQVWELIE 284
           SDP  Y+EAI     +  +  M  E++SMY N VW+L++
Sbjct: 370 SDPVTYQEAIHCPHFTSWKETMDDEMNSMYMNGVWDLVD 408


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 37/91 (40%), Positives = 58/91 (63%)
 Frame = -1

Query: 276 VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIKESTMLKLSHQ*PCLIKFIWTLLAI 97
           V PI CKW++K K  ++ N +IYKA  + K  + +        ++    ++K I  LLA 
Sbjct: 483 VKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQV-HGIDYDETYSPVAMLKSIRILLAT 541

Query: 96  SAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
           +AH+DYEIW+M+VK  FLNG+L++ +Y+ QP
Sbjct: 542 AAHYDYEIWQMDVKTAFLNGNLEEHVYMTQP 572


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1073

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
 Frame = -1

Query: 276  VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIK----ESTMLKLSHQ*PCLIKFIWT 109
            V  I CKWV+K K  ++ N  IYKA  + K  R I+    + T   ++     ++K I  
Sbjct: 766  VKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVA-----MLKSIRI 820

Query: 108  LLAISAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
            +LAI+A+FDYEIW+M VK  FLNG+ D+D+Y+ QP
Sbjct: 821  VLAIAAYFDYEIWQMEVKTAFLNGNHDEDVYMTQP 855


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
 Frame = -1

Query: 276  VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIK----ESTMLKLSHQ*PCLIKFIWT 109
            V  I CKWV+K K  ++ N  IYKA  + K  R I+    + T   ++     ++K I  
Sbjct: 756  VKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVA-----MLKSIRI 810

Query: 108  LLAISAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
            +LAI+A+FDYEIW+M VK  FLNG+ D+D+Y+ QP
Sbjct: 811  VLAIAAYFDYEIWQMEVKTAFLNGNHDEDVYMTQP 845


>gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 649

 Score = 59.3 bits (142), Expect(2) = 4e-11
 Identities = 32/91 (35%), Positives = 48/91 (52%)
 Frame = -1

Query: 276 VGPIGCKWVYK*KRGIEENDEIYKAD*LQKASRNIKESTMLKLSHQ*PCLIKFIWTLLAI 97
           V  I CKWV+K K  ++ N  I+KA                            +  +LAI
Sbjct: 239 VKAIECKWVFKKKTDVDGNVHIHKAR---------------------------LVIVLAI 271

Query: 96  SAHFDYEIWEMNVKMTFLNGHLDKDIYIKQP 4
           + +F+Y+IW+M+VK  FLNG+LD+D+Y+ QP
Sbjct: 272 ATYFNYKIWQMDVKTAFLNGNLDEDVYMTQP 302



 Score = 35.0 bits (79), Expect(2) = 4e-11
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = -3

Query: 463 RSPNRYMFWR*SFEVVPDKHESDPDNYKEAISDIDVSY*QVAM*SELDSMYSNQVWELIE 284
           R+P RY         +      +P  Y+EA+   D      AM SE++ M+ NQVW L++
Sbjct: 175 RTPARYALLTTGQRDILLLDNDEPTTYEEAMVGPDSEKWLEAMKSEIEFMHVNQVWNLVD 234

Query: 283 P 281
           P
Sbjct: 235 P 235