BLASTX nr result
ID: Cornus23_contig00034996
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00034996
(792 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008391159.1| PREDICTED: uncharacterized protein LOC103453... 80 1e-12
ref|XP_013633287.1| PREDICTED: uncharacterized protein LOC106338... 63 3e-08
ref|XP_013706342.1| PREDICTED: uncharacterized protein LOC106410... 59 3e-08
dbj|BAA77394.1| SAE1-S9-protein [Brassica rapa] 63 7e-08
ref|XP_013669614.1| PREDICTED: uncharacterized protein LOC106374... 60 2e-07
ref|XP_009114091.1| PREDICTED: uncharacterized protein LOC103839... 59 3e-07
ref|XP_013728684.1| PREDICTED: uncharacterized protein LOC106432... 59 3e-07
ref|XP_013717581.1| PREDICTED: uncharacterized protein LOC106421... 59 3e-07
ref|XP_009103797.1| PREDICTED: uncharacterized protein LOC103829... 55 4e-07
ref|XP_009128552.1| PREDICTED: uncharacterized protein LOC103853... 61 8e-07
ref|XP_013751235.1| PREDICTED: uncharacterized protein LOC106453... 56 1e-06
ref|XP_013654335.1| PREDICTED: uncharacterized protein LOC106359... 53 2e-06
ref|XP_013665101.1| PREDICTED: uncharacterized protein LOC106369... 54 2e-06
ref|XP_009145549.1| PREDICTED: putative ribonuclease H protein A... 55 2e-06
ref|XP_013658277.1| PREDICTED: uncharacterized protein LOC106363... 50 2e-06
ref|XP_013704384.1| PREDICTED: uncharacterized protein LOC106408... 60 2e-06
ref|XP_013657911.1| PREDICTED: uncharacterized protein LOC106362... 57 3e-06
ref|XP_013745749.1| PREDICTED: uncharacterized protein LOC106448... 57 3e-06
ref|XP_013595153.1| PREDICTED: uncharacterized protein LOC106303... 59 4e-06
ref|XP_013616948.1| PREDICTED: uncharacterized protein LOC106323... 55 4e-06
>ref|XP_008391159.1| PREDICTED: uncharacterized protein LOC103453396 [Malus domestica]
Length = 1219
Score = 80.5 bits (197), Expect = 1e-12
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Frame = +3
Query: 81 PLLLVQISELSSFKPPSTTADAPVWIPSPTGLFIMKHTIFWLAFPSIQVQWSSLVWNSFS 260
P V +++ S P S + D+ +W PS TG+F + + + ++ W LVW++ S
Sbjct: 1001 PYFSVAVNDSQSIVPSSQSLDSSLWAPSNTGIFSLASIWNCILSVAPKIPWDHLVWHNAS 1060
Query: 261 IPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACYFCLSS*VSHTS-FFLLPFVKTNLELY 437
IPR F LWLA +N+LTTLD C C S SH+ FF PF + +
Sbjct: 1061 IPRASFVLWLAIKNKLTTLDRIGQFSSRANLNCVLCDSDLESHSHLFFDCPFTEGLWQHV 1120
Query: 438 PNKVQIQHF-TSWDHLVAWTSHHWKMKSLQNSINKLVLSL 554
+ + W V + HW+ KSL + KL L++
Sbjct: 1121 LMRCGVPWLHPPWPSFVDSVATHWRGKSLPVVVKKLSLAV 1160
>ref|XP_013633287.1| PREDICTED: uncharacterized protein LOC106338984 [Brassica oleracea
var. oleracea]
Length = 297
Score = 62.8 bits (151), Expect(2) = 3e-08
Identities = 46/133 (34%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Frame = +3
Query: 33 N*TLSSLIVNDYWNFPPLLLVQISE-----LSSFKPPSTT--ADAPVWIPSPTGL---FI 182
N T+S + N +WN PP I+E LS+ + P+ DA +W G F
Sbjct: 52 NATVSQAVSNGHWNLPPARS-DIAETLHVILSTTRVPTDANGKDAYLWRNQSGGFAASFS 110
Query: 183 MKHTIFWLAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACY 362
+ T L P+ VQW S VW IPRC F W A RL T D +P C
Sbjct: 111 SRVTWERLRTPNPSVQWHSFVWFKEEIPRCSFISWTAFLGRLPTRDRLISWGLSVPPGCV 170
Query: 363 FCLSS*VSHTSFF 401
FC S+ SH F
Sbjct: 171 FCTSANESHNHLF 183
Score = 23.1 bits (48), Expect(2) = 3e-08
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 376 HKSLTHLFFSCHLSRPIW 429
++S HLFF C + IW
Sbjct: 176 NESHNHLFFQCAFAAAIW 193
>ref|XP_013706342.1| PREDICTED: uncharacterized protein LOC106410391 [Brassica napus]
Length = 297
Score = 59.3 bits (142), Expect(3) = 3e-08
Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Frame = +3
Query: 39 TLSSLIVNDYWNFPPL-----LLVQISELSSFKPP--STTADAPVW-IPSPTGLFIMKHT 194
T+S + N +WN PP + +QI LS+ P + +D +W I S +
Sbjct: 54 TVSQAVRNGHWNLPPARSEDAVTLQII-LSTLNVPCEANVSDVYLWKIQSGGFAATFSSS 112
Query: 195 IFW--LAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACYFC 368
+ W L P+ V W S VW IPRC F W A RL T D +P+ C C
Sbjct: 113 VTWGRLRVPNTVVPWHSTVWFKEEIPRCSFITWTAFLRRLPTRDRLISWGLSLPSGCVLC 172
Query: 369 LSS*VSHTSFF 401
S+ SH+ F
Sbjct: 173 TSADESHSHLF 183
Score = 24.3 bits (51), Expect(3) = 3e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 379 KSLTHLFFSCHLSRPIWN 432
+S +HLFF C + +WN
Sbjct: 177 ESHSHLFFECSFAVALWN 194
Score = 21.6 bits (44), Expect(3) = 3e-08
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 515 ILAKLNQ*VSFVPIVNQIWMERNA*AFK 598
+L LNQ I+ +W ERNA FK
Sbjct: 229 VLKLLNQ-----VIIYNLWRERNARIFK 251
>dbj|BAA77394.1| SAE1-S9-protein [Brassica rapa]
Length = 255
Score = 62.8 bits (151), Expect(2) = 7e-08
Identities = 44/134 (32%), Positives = 60/134 (44%), Gaps = 11/134 (8%)
Frame = +3
Query: 33 N*TLSSLIVNDYWNFPPLL-----LVQISELSSFKPPSTTADAPV--WIPSPTGLFIMKH 191
N +++ + N +W PP +QI LS+ PP+ D + W PTG F K
Sbjct: 52 NASVADAVQNGHWYLPPARSEFAETLQII-LSTITPPTDNNDIDIFYWRGGPTGGFTNKF 110
Query: 192 T--IFW--LAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNAC 359
+ + W L PS +V W S V +PRC F WLA RL T D +PN+C
Sbjct: 111 SSKVTWELLCVPSPEVTWHSTVGFKEEVPRCTFITWLAMLERLPTRDRLISWGLTVPNSC 170
Query: 360 YFCLSS*VSHTSFF 401
C SH+ F
Sbjct: 171 VLCNGGVESHSHLF 184
Score = 21.9 bits (45), Expect(2) = 7e-08
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 379 KSLTHLFFSCHLSRPIW 429
+S +HLFF C + +W
Sbjct: 178 ESHSHLFFECSFAVGVW 194
>ref|XP_013669614.1| PREDICTED: uncharacterized protein LOC106374057 [Brassica napus]
Length = 297
Score = 59.7 bits (143), Expect(2) = 2e-07
Identities = 45/133 (33%), Positives = 57/133 (42%), Gaps = 10/133 (7%)
Frame = +3
Query: 33 N*TLSSLIVNDYWNFPPLLLVQISE-----LSSFKPPSTT--ADAPVWIPSPTGL---FI 182
N T+S + N +WN PP I+E LS+ + P+ DA +W G F
Sbjct: 52 NATVSQAVSNGHWNLPPARS-DIAETLHVILSTTRVPTDANGKDAYLWRNQSGGFAASFS 110
Query: 183 MKHTIFWLAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACY 362
+ T L + VQW S VW IPRC F W A RL T D +P C
Sbjct: 111 SRVTWERLRTHNPSVQWHSFVWFKEEIPRCSFVSWTAFLGRLPTRDRLISWGLSVPPGCV 170
Query: 363 FCLSS*VSHTSFF 401
FC S+ SH F
Sbjct: 171 FCTSANESHNHLF 183
Score = 23.1 bits (48), Expect(2) = 2e-07
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 376 HKSLTHLFFSCHLSRPIW 429
++S HLFF C + IW
Sbjct: 176 NESHNHLFFQCAFAAAIW 193
>ref|XP_009114091.1| PREDICTED: uncharacterized protein LOC103839336 [Brassica rapa]
Length = 275
Score = 59.3 bits (142), Expect(2) = 3e-07
Identities = 44/131 (33%), Positives = 56/131 (42%), Gaps = 10/131 (7%)
Frame = +3
Query: 39 TLSSLIVNDYWNFPPL-----LLVQISELSSFKPPSTT--ADAPVWIPSPTGL---FIMK 188
++S + N W+FPP + +Q+ LSS PS D +W G F K
Sbjct: 23 SVSEAVRNGDWSFPPARSDNAVTLQVV-LSSTSVPSIERGVDTYLWRNQSGGFGRQFSTK 81
Query: 189 HTIFWLAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACYFC 368
T L PS +V W +VW IPRC F WLA RL T D + +P C C
Sbjct: 82 VTWDRLREPSPKVDWHDVVWFQEEIPRCSFLTWLAMLERLPTRDRLATWGLSVPENCVLC 141
Query: 369 LSS*VSHTSFF 401
S SH F
Sbjct: 142 SSGRESHQHLF 152
Score = 23.5 bits (49), Expect(2) = 3e-07
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 379 KSLTHLFFSCHLSRPIWN 432
+S HLFF C + +WN
Sbjct: 146 ESHQHLFFGCSYAIDVWN 163
>ref|XP_013728684.1| PREDICTED: uncharacterized protein LOC106432398 [Brassica napus]
Length = 298
Score = 58.5 bits (140), Expect(2) = 3e-07
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Frame = +3
Query: 39 TLSSLIVNDYWNFPPL-----LLVQISELSSFKPPSTTADAP--VWIPSPTGLF--IMKH 191
+++ + + +WN PP + +QI LS+ PS T+D +W G F
Sbjct: 54 SVADAVRDGHWNLPPARSDHAVTLQIV-LSTIPVPSHTSDKDTYLWGGGGGGGFGSSFSS 112
Query: 192 TIFW--LAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACYF 365
++ W L S V+W +VW +PRC F WL+ NRL T D +P+AC F
Sbjct: 113 SVTWNLLRQRSPSVEWHKVVWFKEEVPRCSFITWLSVLNRLPTRDRLISWGLTVPDACVF 172
Query: 366 CLSS*VSHTSFF 401
C + SH F
Sbjct: 173 CSTDVESHRHLF 184
Score = 23.9 bits (50), Expect(2) = 3e-07
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 379 KSLTHLFFSCHLSRPIWN 432
+S HLFF C + IWN
Sbjct: 178 ESHRHLFFGCCYATAIWN 195
>ref|XP_013717581.1| PREDICTED: uncharacterized protein LOC106421282 [Brassica napus]
Length = 297
Score = 58.9 bits (141), Expect(2) = 3e-07
Identities = 41/132 (31%), Positives = 52/132 (39%), Gaps = 9/132 (6%)
Frame = +3
Query: 33 N*TLSSLIVNDYWNFPPL------LLVQISELSSFKPPSTTADAPVWIPSPTGL---FIM 185
N T++ + N +WN PP L + + S D +W G F
Sbjct: 52 NATVAQAVHNGHWNLPPARSDYAETLQIVLSTTDVPSDSNGNDVYLWRARSGGFGASFSS 111
Query: 186 KHTIFWLAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACYF 365
T L P QVQW S VW IPRC FT W A RL T D +P C
Sbjct: 112 PATWERLRTPKPQVQWHSTVWFREEIPRCSFTTWTAILGRLPTRDRLISWGLSLPPGCVL 171
Query: 366 CLSS*VSHTSFF 401
C ++ SH+ F
Sbjct: 172 CSNAIESHSHLF 183
Score = 23.5 bits (49), Expect(2) = 3e-07
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 379 KSLTHLFFSCHLSRPIWN 432
+S +HLFF C + WN
Sbjct: 177 ESHSHLFFECSFAAVAWN 194
>ref|XP_009103797.1| PREDICTED: uncharacterized protein LOC103829862 [Brassica rapa]
Length = 297
Score = 55.5 bits (132), Expect(3) = 4e-07
Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Frame = +3
Query: 39 TLSSLIVNDYWNFPPL-----LLVQISELSSFKPP--STTADAPVW-IPSPTGLFIMKHT 194
T+S + N +WN P + +QI LS+ P + +D +W I S +
Sbjct: 54 TVSQAVRNGHWNLSPARSEDAVTLQII-LSTLNVPCEANGSDVYLWKIQSGGFAATFSSS 112
Query: 195 IFW--LAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACYFC 368
+ W L P+ V W S VW IPRC F W A RL T D +P+ C C
Sbjct: 113 VTWGRLRVPNTVVPWHSTVWFKEEIPRCSFITWTAFLRRLPTRDRLISWGLSLPSGCVLC 172
Query: 369 LSS*VSHTSFF 401
S+ SH+ F
Sbjct: 173 TSADESHSHLF 183
Score = 24.3 bits (51), Expect(3) = 4e-07
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 379 KSLTHLFFSCHLSRPIWN 432
+S +HLFF C + +WN
Sbjct: 177 ESHSHLFFECSFAVALWN 194
Score = 21.6 bits (44), Expect(3) = 4e-07
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 515 ILAKLNQ*VSFVPIVNQIWMERNA*AFK 598
+L LNQ I+ +W ERNA FK
Sbjct: 229 VLKLLNQ-----VIIYNLWRERNARIFK 251
>ref|XP_009128552.1| PREDICTED: uncharacterized protein LOC103853387 [Brassica rapa]
Length = 268
Score = 61.2 bits (147), Expect = 8e-07
Identities = 41/109 (37%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Frame = +3
Query: 108 LSSFKPPSTTADAPVWI-----PSPTGLFIMKHTIFWLAFPSIQVQWSSLVWNSFSIPRC 272
LS+ PPS V++ F K T L PS V WS LVW IPRC
Sbjct: 50 LSTMTPPSDENGRDVYLWRNGEDHYVQKFSTKATWIRLREPSPLVPWSRLVWFKEEIPRC 109
Query: 273 RFTLWLAAQNRLTTLDHPSVAHRHIPNACYFCLSS*VSHTS-FFLLPFV 416
F W+ A RL T D + ++P C CLS SH+ FF PFV
Sbjct: 110 SFVTWMVALARLPTRDRLASWGMNVPTQCVLCLSGTESHSHLFFQCPFV 158
>ref|XP_013751235.1| PREDICTED: uncharacterized protein LOC106453539 [Brassica napus]
Length = 297
Score = 55.8 bits (133), Expect(2) = 1e-06
Identities = 39/132 (29%), Positives = 54/132 (40%), Gaps = 9/132 (6%)
Frame = +3
Query: 33 N*TLSSLIVNDYWNFPPLLLVQISEL----SSFKPPSTTADAPVWI-----PSPTGLFIM 185
N T+S + N +WN PP L S+ P+ + V++ G F
Sbjct: 52 NATVSQAVRNGHWNLPPARSENAETLQVILSTLDVPTDEKGSDVYLWRIQSGGFAGSFSS 111
Query: 186 KHTIFWLAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACYF 365
+ T L PS +V W S+VW +PRC F W A RL T D +P C
Sbjct: 112 RVTWERLRNPSPRVPWHSVVWFKEEVPRCSFITWTAVLKRLPTRDRLISWGLSLPPGCVL 171
Query: 366 CLSS*VSHTSFF 401
C + SH+ F
Sbjct: 172 CSVADESHSHIF 183
Score = 24.6 bits (52), Expect(2) = 1e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 379 KSLTHLFFSCHLSRPIWN 432
+S +H+FF C + +WN
Sbjct: 177 ESHSHIFFECSFATAVWN 194
>ref|XP_013654335.1| PREDICTED: uncharacterized protein LOC106359131 [Brassica napus]
Length = 305
Score = 53.1 bits (126), Expect(3) = 2e-06
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 9/132 (6%)
Frame = +3
Query: 33 N*TLSSLIVNDYWNFPPLLLVQISEL----SSFKPP--STTADAPVWIPSPTGLFI-MKH 191
N T+S + + +WN PP L S+ P + +D +W G
Sbjct: 52 NATVSQAVRDGHWNLPPARSEYAETLHVILSTMPVPCQANGSDVFLWRNRSGGFGTSFSS 111
Query: 192 TIFW--LAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACYF 365
++ W L P+ VQW +VW IPRC F +W A RL T D +P C
Sbjct: 112 SVTWERLRIPNPLVQWHPVVWFKEEIPRCSFIVWTAVLKRLPTRDRLIAWGITLPPGCVL 171
Query: 366 CLSS*VSHTSFF 401
C ++ SH+ F
Sbjct: 172 CPNAVESHSHLF 183
Score = 25.0 bits (53), Expect(3) = 2e-06
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 379 KSLTHLFFSCHLSRPIWN 432
+S +HLFF C + IWN
Sbjct: 177 ESHSHLFFECSYATVIWN 194
Score = 20.8 bits (42), Expect(3) = 2e-06
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 515 ILAKLNQ*VSFVPIVNQIWMERNA*AFKARKSTKWLCFQ 631
+L LNQ I+ +W ERNA F+ T+ F+
Sbjct: 229 VLKLLNQ-----VIIYNLWRERNARIFRDVSMTQEAFFK 262
>ref|XP_013665101.1| PREDICTED: uncharacterized protein LOC106369499 [Brassica napus]
Length = 297
Score = 53.5 bits (127), Expect(3) = 2e-06
Identities = 44/134 (32%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Frame = +3
Query: 33 N*TLSSLIVNDYWNFPPLL-----LVQISELSSFKPP--STTADAPVWIPSPTGLF--IM 185
N T+S ++ N +WN PP +QI LS+ P S +D +W TG F
Sbjct: 52 NATVSQVVRNGHWNLPPARSEYAETLQII-LSTMTVPCDSNGSDVYLW-RLHTGGFGPSF 109
Query: 186 KHTIFWLAFPSIQ--VQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNAC 359
+ W F + VQW +VW IPRC F W A RL T D IP+ C
Sbjct: 110 SSPVTWERFRISKPLVQWHPVVWFKEEIPRCSFITWTAYLGRLPTRDRLRSWRITIPSGC 169
Query: 360 YFCLSS*VSHTSFF 401
C + SH+ F
Sbjct: 170 VLCSMADESHSHLF 183
Score = 23.1 bits (48), Expect(3) = 2e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 379 KSLTHLFFSCHLSRPIWN 432
+S +HLFF C + WN
Sbjct: 177 ESHSHLFFECSYAAVAWN 194
Score = 22.3 bits (46), Expect(3) = 2e-06
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 515 ILAKLNQ*VSFVPIVNQIWMERNA*AFKARKST 613
IL LNQ I+ +W ERNA F+ T
Sbjct: 229 ILKLLNQ-----VIIYNLWRERNARIFRVTSKT 256
>ref|XP_009145549.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 430
Score = 55.1 bits (131), Expect(2) = 2e-06
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
Frame = +3
Query: 39 TLSSLIVNDYWNFPPLLLVQISEL----SSFKPPSTT--ADAPVW---IPSPTGLFIMKH 191
T+S + N +WN PP L S+ P+ +D +W + G F +
Sbjct: 173 TVSQAVRNGHWNLPPAHSENAETLQVILSTLDVPTDEKGSDVYLWRIQLGGFAGSFSSRV 232
Query: 192 TIFWLAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACYFCL 371
T L PS +V W S+VW +PRC F W A RL T D +P C C
Sbjct: 233 TWERLRNPSPRVPWHSVVWFKEEVPRCSFITWTAVLKRLPTRDRLISWGLSLPPGCVLCS 292
Query: 372 SS*VSHTSFF 401
+ SH+ F
Sbjct: 293 VADESHSHIF 302
Score = 24.6 bits (52), Expect(2) = 2e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 379 KSLTHLFFSCHLSRPIWN 432
+S +H+FF C + +WN
Sbjct: 296 ESHSHIFFECSFATAVWN 313
>ref|XP_013658277.1| PREDICTED: uncharacterized protein LOC106363011 [Brassica napus]
Length = 1558
Score = 50.1 bits (118), Expect(3) = 2e-06
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 9/128 (7%)
Frame = +3
Query: 12 QRAGL*RN*TLSSLIVNDYWNFPPL----LLVQISELSSFKPPSTTA--DAPVWIPSPTG 173
Q G+ R T++S + WN L I+ ++S PP A D +W
Sbjct: 1312 QIMGIQRYATVASAASSGRWNLRRCRSNHLRAMITRINSVPPPVEEAGSDCLLWRHGEND 1371
Query: 174 L---FIMKHTIFWLAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRH 344
F K+T + V+WS L+W S ++PR F WLA +NRL+T D + H
Sbjct: 1372 YKAWFSSKNTWNQIRRQGNTVEWSKLIWFSHAVPRYSFIAWLAIRNRLSTGDRTQIWGEH 1431
Query: 345 IPNACYFC 368
+C C
Sbjct: 1432 --QSCRLC 1437
Score = 26.6 bits (57), Expect(3) = 2e-06
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 373 PHKSLTHLFFSCHLSRPIW 429
P++S HLFF+C S IW
Sbjct: 1440 PNESRDHLFFACPYSYTIW 1458
Score = 21.9 bits (45), Expect(3) = 2e-06
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +2
Query: 539 VSFVPIVNQIWMERNA 586
+SF +++ +W ERN+
Sbjct: 1495 LSFQAVIHSVWRERNS 1510
>ref|XP_013704384.1| PREDICTED: uncharacterized protein LOC106408104 [Brassica napus]
Length = 271
Score = 59.7 bits (143), Expect = 2e-06
Identities = 53/185 (28%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Frame = +3
Query: 39 TLSSLIVNDYWNFPP------LLLVQISELSSFKPPSTTADAPVWIPSPTGLFIMKHT-- 194
++S +VN W FPP + L + + PS+ D +W TG F+ +
Sbjct: 84 SVSDAVVNGDWFFPPAPSEDAVTLQIVMSTTRVPTPSSGPDVYLW-RGQTGGFVSDFSSH 142
Query: 195 IFW--LAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACYFC 368
+ W L + V W +VW IPRC F WLA RL T D + + +C C
Sbjct: 143 VKWNRLRATAPMVPWYEVVWFKEEIPRCYFVTWLAMLARLPTRDRLLLWGLKVLGSCVLC 202
Query: 369 LSS*VSHTS-FFLLPFVKTNLELYPNKVQIQHFTSWDHLVAWTSHHWKMKSLQNS-INKL 542
SH FF PFV Y + I +V W S + + S+Q I KL
Sbjct: 203 DDGTESHDHLFFNCPFVAGIWSKYCGRFIISSPIILHAVVLWCSQYQGLYSVQTKVIFKL 262
Query: 543 VLSLL 557
+L ++
Sbjct: 263 LLQVI 267
>ref|XP_013657911.1| PREDICTED: uncharacterized protein LOC106362581 [Brassica napus]
Length = 298
Score = 57.4 bits (137), Expect(2) = 3e-06
Identities = 43/154 (27%), Positives = 60/154 (38%), Gaps = 9/154 (5%)
Frame = +3
Query: 39 TLSSLIVNDYWNFPPLLLVQISEL----SSFKPPSTT--ADAPVWIPSPTGL---FIMKH 191
T+S+ N +W+ PP + L S+ +PPS+ D +W F K
Sbjct: 54 TVSAAAPNGHWSLPPARSDEAETLQVVLSTMQPPSSLHGKDCFLWRSGAHSFLPKFSSKA 113
Query: 192 TIFWLAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACYFCL 371
T ++ PS V W L+W IPRC F W++ +RL T D +P C C
Sbjct: 114 TWNFVRQPSPLVSWYKLIWFKEEIPRCSFVSWMSVLSRLPTRDRLISWGMQVPPVCPLCS 173
Query: 372 SS*VSHTSFFLLPFVKTNLELYPNKVQIQHFTSW 473
SH F T + HFT W
Sbjct: 174 LDHESHAHMFFSCCFSTAV--------WSHFTGW 199
Score = 21.6 bits (44), Expect(2) = 3e-06
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 554 IVNQIWMERNA*AFKARKST 613
IV +W ERN FK ST
Sbjct: 237 IVYSLWRERNVRIFKNVSST 256
>ref|XP_013745749.1| PREDICTED: uncharacterized protein LOC106448408 [Brassica napus]
Length = 298
Score = 57.4 bits (137), Expect(2) = 3e-06
Identities = 43/154 (27%), Positives = 60/154 (38%), Gaps = 9/154 (5%)
Frame = +3
Query: 39 TLSSLIVNDYWNFPPLLLVQISEL----SSFKPPSTTA--DAPVWIPSPTGL---FIMKH 191
T+S+ N +W+ PP + L S+ +PPS+ D +W F K
Sbjct: 54 TVSAAAPNGHWSLPPARSDEAETLQVVLSTMQPPSSLRGKDCFLWRSGAHSFLPKFSSKA 113
Query: 192 TIFWLAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACYFCL 371
T ++ PS V W L+W IPRC F W++ +RL T D +P C C
Sbjct: 114 TWNFVRQPSPLVSWYKLIWFKEEIPRCSFVSWMSVLSRLPTRDRLISWGMQVPPVCPLCS 173
Query: 372 SS*VSHTSFFLLPFVKTNLELYPNKVQIQHFTSW 473
SH F T + HFT W
Sbjct: 174 LDHESHAHMFFSCCFSTAV--------WSHFTGW 199
Score = 21.6 bits (44), Expect(2) = 3e-06
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 554 IVNQIWMERNA*AFKARKST 613
IV +W ERN FK ST
Sbjct: 237 IVYSLWRERNVRIFKNVSST 256
>ref|XP_013595153.1| PREDICTED: uncharacterized protein LOC106303428 [Brassica oleracea
var. oleracea]
Length = 268
Score = 58.9 bits (141), Expect = 4e-06
Identities = 40/109 (36%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = +3
Query: 108 LSSFKPPSTTADAPVWI-----PSPTGLFIMKHTIFWLAFPSIQVQWSSLVWNSFSIPRC 272
LS+ PPS V++ F K T L PS V WS LVW IPRC
Sbjct: 50 LSTMTPPSDENGRDVYLWRNGEDHYVQKFSTKATWIRLREPSPLVPWSRLVWFKEEIPRC 109
Query: 273 RFTLWLAAQNRLTTLDHPSVAHRHIPNACYFCLSS*VSHTS-FFLLPFV 416
F W+ A RL T D + ++P C CL SH+ FF PFV
Sbjct: 110 SFVTWMVALARLPTRDRLASWGMNVPTQCVLCLFGTESHSHLFFQCPFV 158
>ref|XP_013616948.1| PREDICTED: uncharacterized protein LOC106323353 [Brassica oleracea
var. oleracea]
Length = 297
Score = 55.1 bits (131), Expect(2) = 4e-06
Identities = 40/132 (30%), Positives = 50/132 (37%), Gaps = 9/132 (6%)
Frame = +3
Query: 33 N*TLSSLIVNDYWNFPPL------LLVQISELSSFKPPSTTADAPVWIPSPTGL---FIM 185
N T++ + WN PP L + + S D +W G F
Sbjct: 52 NATVTQAVHTGPWNLPPARSDYAETLQIVLSTTDVPSDSNGNDVYLWRARSGGFGASFSS 111
Query: 186 KHTIFWLAFPSIQVQWSSLVWNSFSIPRCRFTLWLAAQNRLTTLDHPSVAHRHIPNACYF 365
T L P QVQW S VW IPRC FT W A RL T D +P C
Sbjct: 112 PATWERLRTPKPQVQWHSTVWFREEIPRCSFTTWTATLGRLPTRDRLISWGLSLPPGCVL 171
Query: 366 CLSS*VSHTSFF 401
C ++ SH+ F
Sbjct: 172 CSNAIESHSHLF 183
Score = 23.5 bits (49), Expect(2) = 4e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 379 KSLTHLFFSCHLSRPIWN 432
+S +HLFF C + WN
Sbjct: 177 ESHSHLFFECSFAAVAWN 194