BLASTX nr result

ID: Cornus23_contig00034954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00034954
         (419 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   211   1e-52
dbj|BAQ55936.1| pentatricopeptide repeat protein [Nicotiana tome...   206   4e-51
dbj|BAQ55935.1| pentatricopeptide repeat protein [Nicotiana sylv...   206   4e-51
ref|XP_009772120.1| PREDICTED: pentatricopeptide repeat-containi...   206   4e-51
ref|XP_009629430.1| PREDICTED: pentatricopeptide repeat-containi...   206   4e-51
ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containi...   201   2e-49
ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containi...   199   5e-49
ref|XP_002511709.1| pentatricopeptide repeat-containing protein,...   194   3e-47
ref|XP_002511699.1| pentatricopeptide repeat-containing protein,...   194   3e-47
emb|CDO97694.1| unnamed protein product [Coffea canephora]            192   6e-47
ref|XP_014515859.1| PREDICTED: pentatricopeptide repeat-containi...   192   8e-47
gb|KOM57733.1| hypothetical protein LR48_Vigan11g076600 [Vigna a...   192   8e-47
ref|XP_002320719.2| pentatricopeptide repeat-containing family p...   192   1e-46
gb|AKH05187.1| chlororespiratory reduction 4 [Monsonia marlothii]     190   3e-46
ref|XP_007155354.1| hypothetical protein PHAVU_003G194000g [Phas...   190   3e-46
gb|AKH05198.1| chlororespiratory reduction 4 [Pelargonium transv...   190   4e-46
ref|XP_011034218.1| PREDICTED: pentatricopeptide repeat-containi...   190   4e-46
gb|AKH05185.1| chlororespiratory reduction 4 [Hypseocharis bilob...   189   5e-46
gb|AKH05196.1| chlororespiratory reduction 4, partial [Pelargoni...   189   9e-46
gb|AKH05188.1| chlororespiratory reduction 4 [Monsonia emarginata]    189   9e-46

>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Vitis vinifera]
           gi|731421186|ref|XP_010661651.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Vitis vinifera]
           gi|731421189|ref|XP_010661652.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Vitis vinifera]
           gi|731421191|ref|XP_010661653.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Vitis vinifera]
          Length = 635

 Score =  211 bits (538), Expect = 1e-52
 Identities = 100/139 (71%), Positives = 117/139 (84%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWA ++DGYAKLG +DIA  LF+EMPE+D+ISCN MMAGYVQN H +EAL  FHDMLS 
Sbjct: 285 VSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSR 344

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
            +L+PD  TLLI LSAIAQLGH +EGV LH YIE+NGF LS +LGVALIDMY+KCGSI+N
Sbjct: 345 KELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDN 404

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           AL VFEDI +KS+D WNA+
Sbjct: 405 ALSVFEDIDDKSIDHWNAI 423


>dbj|BAQ55936.1| pentatricopeptide repeat protein [Nicotiana tomentosiformis]
          Length = 626

 Score =  206 bits (525), Expect = 4e-51
 Identities = 92/139 (66%), Positives = 125/139 (89%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWAI++DGYAK G++D+A   F++MPE+D+ISCN +MAGYV+N + +EALK+FHDML E
Sbjct: 286 VSWAIMVDGYAKTGNIDVARRFFDDMPERDVISCNAIMAGYVKNGYCLEALKVFHDMLRE 345

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
           S L PD+TT+LIALSA+A+LG+I+EG+ LH YIEENGF+++GRLGVALIDMY+KCGS+++
Sbjct: 346 SSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEENGFLVAGRLGVALIDMYAKCGSVDS 405

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+ VF+DI+E++VD WNAM
Sbjct: 406 AIGVFDDIQERTVDHWNAM 424



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMP--EKDIISCNTMMAGYVQ-NRHFVEALKIFHDM 249
           VS+  +IDGY K G +D+A  LF+ MP   ++ +S N M+ GYV+ ++ F  A ++F  M
Sbjct: 190 VSYNTMIDGYVKCGMLDVACCLFDFMPVEMRNFVSWNAMLTGYVKLDKGFDVAWELFDKM 249

Query: 248 LSESKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGS 69
                   D  +  + L    + G++ +  +L   + +   +        ++D Y+K G+
Sbjct: 250 PQR-----DLVSWNLMLCCCVKSGNVEKATSLFKVMPKKDVV----SWAIMVDGYAKTGN 300

Query: 68  IENALLVFEDIKEKSVDLWNAM 3
           I+ A   F+D+ E+ V   NA+
Sbjct: 301 IDVARRFFDDMPERDVISCNAI 322


>dbj|BAQ55935.1| pentatricopeptide repeat protein [Nicotiana sylvestris]
          Length = 626

 Score =  206 bits (525), Expect = 4e-51
 Identities = 90/139 (64%), Positives = 125/139 (89%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWAI++DGYAK+G VD+A   F++MPE+D+ISCN +MAGYV+N H++E+LK+FHDML E
Sbjct: 286 VSWAIMVDGYAKIGKVDVARRFFDDMPERDVISCNAIMAGYVKNSHYLESLKVFHDMLRE 345

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
           S L PD+T+LLIALSA+A+LG+I+EG+ LH Y+EE+GF+++G+LGVALIDMY+KCGS+++
Sbjct: 346 SSLAPDSTSLLIALSAVAELGYIDEGIALHCYVEEHGFLVAGKLGVALIDMYAKCGSVDS 405

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+ +F DI+EK+VD WNAM
Sbjct: 406 AMGLFNDIQEKTVDHWNAM 424



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPE--KDIISCNTMMAGYVQ-NRHFVEALKIFHDM 249
           VS+  +IDGY K G +D+A  LF+ MP   ++++S N M+ GYV+ ++ F  A ++F  M
Sbjct: 190 VSYNTMIDGYVKCGMLDVACCLFDFMPAEMRNLVSWNAMLTGYVKLDKGFDIAWELFDKM 249

Query: 248 LSESKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGS 69
                   D  +  + L    + G++ +   L   + +   +        ++D Y+K G 
Sbjct: 250 PKR-----DLVSWNLMLCCCVKSGNVEKATALFDVMPKKDVV----SWAIMVDGYAKIGK 300

Query: 68  IENALLVFEDIKEKSVDLWNAM 3
           ++ A   F+D+ E+ V   NA+
Sbjct: 301 VDVARRFFDDMPERDVISCNAI 322


>ref|XP_009772120.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Nicotiana sylvestris]
          Length = 626

 Score =  206 bits (525), Expect = 4e-51
 Identities = 90/139 (64%), Positives = 125/139 (89%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWAI++DGYAK+G VD+A   F++MPE+D+ISCN +MAGYV+N H++E+LK+FHDML E
Sbjct: 286 VSWAIMVDGYAKIGKVDVARRFFDDMPERDVISCNAIMAGYVKNSHYLESLKVFHDMLRE 345

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
           S L PD+T+LLIALSA+A+LG+I+EG+ LH Y+EE+GF+++G+LGVALIDMY+KCGS+++
Sbjct: 346 SSLAPDSTSLLIALSAVAELGYIDEGIALHCYVEEHGFLVAGKLGVALIDMYAKCGSVDS 405

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+ +F DI+EK+VD WNAM
Sbjct: 406 AMGLFNDIQEKTVDHWNAM 424



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPE--KDIISCNTMMAGYVQ-NRHFVEALKIFHDM 249
           VS+  +IDGY K G +D+A  LF+ MP   ++++S N M+ GYV+ ++ F  A ++F  M
Sbjct: 190 VSYNTMIDGYVKCGMLDVACCLFDFMPAEMRNLVSWNAMLTGYVKLDKGFDIAWELFDKM 249

Query: 248 LSESKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGS 69
                   D  +  + L    + G++ +   L   + +   +        ++D Y+K G 
Sbjct: 250 PKR-----DLVSWNLMLCCCVKSGNVEKATALFDVMPKKDVV----SWAIMVDGYAKIGK 300

Query: 68  IENALLVFEDIKEKSVDLWNAM 3
           ++ A   F+D+ E+ V   NA+
Sbjct: 301 VDVARRFFDDMPERDVISCNAI 322


>ref|XP_009629430.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Nicotiana tomentosiformis]
          Length = 626

 Score =  206 bits (525), Expect = 4e-51
 Identities = 92/139 (66%), Positives = 125/139 (89%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWAI++DGYAK G++D+A   F++MPE+D+ISCN +MAGYV+N + +EALK+FHDML E
Sbjct: 286 VSWAIMVDGYAKTGNIDVARRFFDDMPERDVISCNAIMAGYVKNGYCLEALKVFHDMLRE 345

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
           S L PD+TT+LIALSA+A+LG+I+EG+ LH YIEENGF+++GRLGVALIDMY+KCGS+++
Sbjct: 346 SSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEENGFLVAGRLGVALIDMYAKCGSVDS 405

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+ VF+DI+E++VD WNAM
Sbjct: 406 AIGVFDDIQERTVDHWNAM 424



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMP--EKDIISCNTMMAGYVQ-NRHFVEALKIFHDM 249
           VS+  +IDGY K G +D+A  LF+ MP   ++ +S N M+ GYV+ ++ F  A ++F  M
Sbjct: 190 VSYNTMIDGYVKCGMLDVACCLFDFMPVEMRNFVSWNAMLTGYVKLDKGFDVAWELFDKM 249

Query: 248 LSESKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGS 69
                   D  +  + L    + G++ +  +L   + +   +        ++D Y+K G+
Sbjct: 250 PQR-----DLVSWNLMLCCCVKSGNVEKATSLFKVMPKKDVV----SWAIMVDGYAKTGN 300

Query: 68  IENALLVFEDIKEKSVDLWNAM 3
           I+ A   F+D+ E+ V   NA+
Sbjct: 301 IDVARRFFDDMPERDVISCNAI 322


>ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Solanum tuberosum]
          Length = 625

 Score =  201 bits (511), Expect = 2e-49
 Identities = 91/139 (65%), Positives = 121/139 (87%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWAI++DGYAK+G +DIA   F++MP +D+ISCN +MAGYV+N H +EALK+FHDML  
Sbjct: 285 VSWAIMVDGYAKIGKIDIARRYFDDMPVRDVISCNAIMAGYVKNGHCLEALKVFHDMLRG 344

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
           + L PD+TT L+ALSA+A+LG+I+EG+ LH YIEENGF+++G+LGVALIDMY+KCGSI++
Sbjct: 345 NSLAPDSTTALLALSAVAELGYIDEGIALHCYIEENGFLVAGKLGVALIDMYAKCGSIDS 404

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+ VF DI+EK+VD WNAM
Sbjct: 405 AMGVFNDIQEKNVDHWNAM 423


>ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Solanum lycopersicum]
          Length = 625

 Score =  199 bits (507), Expect = 5e-49
 Identities = 90/139 (64%), Positives = 121/139 (87%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWAI++DGYAK+G +DIA   F++MP +D+ISCN +MAGYV+N H +EALK+FHDMLS+
Sbjct: 285 VSWAIMVDGYAKIGKIDIARRYFDDMPVRDVISCNAIMAGYVKNGHCLEALKVFHDMLSD 344

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
           S   PD+TT L+ALSA+++LG+I+EG+ LH YIEENGF ++G+LGVALIDMY+KCGS+++
Sbjct: 345 SSPAPDSTTALLALSAVSELGYIDEGIALHCYIEENGFPVAGKLGVALIDMYAKCGSVDS 404

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+ VF DI+EK+VD WNAM
Sbjct: 405 AMGVFNDIQEKNVDHWNAM 423


>ref|XP_002511709.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548889|gb|EEF50378.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 450

 Score =  194 bits (492), Expect = 3e-47
 Identities = 93/139 (66%), Positives = 111/139 (79%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           +SWA ++DGYAKLG VDIA   F+ MP++D+++CN MM+GYVQN + +EAL IFHDM  E
Sbjct: 263 ISWANMVDGYAKLGYVDIARKFFDNMPDRDVVACNAMMSGYVQNGYCMEALGIFHDMQRE 322

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
           S L PD  TLLI LSAIAQLGHI +GV +H YI+ENGF L  +LGVALIDMYSKCGS EN
Sbjct: 323 SNLCPDNATLLIVLSAIAQLGHIEKGVEIHCYIQENGFSLEEKLGVALIDMYSKCGSAEN 382

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+LVFE IK K+ D WNAM
Sbjct: 383 AMLVFEGIKGKTADHWNAM 401


>ref|XP_002511699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548879|gb|EEF50368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 474

 Score =  194 bits (492), Expect = 3e-47
 Identities = 93/139 (66%), Positives = 111/139 (79%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           +SWA ++DGYAKLG VDIA   F+ MP++D+++CN MM+GYVQN + +EAL IFHDM  E
Sbjct: 287 ISWANMVDGYAKLGYVDIARKFFDNMPDRDVVACNAMMSGYVQNGYCMEALGIFHDMQRE 346

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
           S L PD  TLLI LSAIAQLGHI +GV +H YI+ENGF L  +LGVALIDMYSKCGS EN
Sbjct: 347 SNLCPDNATLLIVLSAIAQLGHIEKGVEIHCYIQENGFSLEEKLGVALIDMYSKCGSAEN 406

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+LVFE IK K+ D WNAM
Sbjct: 407 AMLVFEGIKGKTADHWNAM 425


>emb|CDO97694.1| unnamed protein product [Coffea canephora]
          Length = 619

 Score =  192 bits (489), Expect = 6e-47
 Identities = 91/138 (65%), Positives = 113/138 (81%)
 Frame = -1

Query: 416 SWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSES 237
           SWAI+IDGYAK GSVD+A   F++MP +D+ISCN MMAGY++N  +VEALK++HD+L+ S
Sbjct: 283 SWAIMIDGYAKSGSVDVARGFFDDMPVRDVISCNAMMAGYLRNGSYVEALKMYHDVLNNS 342

Query: 236 KLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIENA 57
              PD TT LIALSA A LG+INEGVT+H +++ NG   +G+LGVALIDMY+KCG I+ A
Sbjct: 343 DFEPDKTTFLIALSAAAHLGNINEGVTIHSHMKNNGLFAAGKLGVALIDMYAKCGDIDCA 402

Query: 56  LLVFEDIKEKSVDLWNAM 3
           L VFEDIKEKSVD WNAM
Sbjct: 403 LSVFEDIKEKSVDHWNAM 420


>ref|XP_014515859.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Vigna radiata var. radiata]
          Length = 618

 Score =  192 bits (488), Expect = 8e-47
 Identities = 89/139 (64%), Positives = 113/139 (81%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSW  +IDGYAK G V  A  LF+EMP +D+ISCN+MMAGYVQN + VEALKIFHDM   
Sbjct: 280 VSWVTMIDGYAKSGDVLAARRLFDEMPRRDVISCNSMMAGYVQNGYCVEALKIFHDMKRA 339

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
           + ++PD TTLLI L+A AQLGH+ +GV +HHY+ + G+ L+G+LGVALIDMYSKCGSIEN
Sbjct: 340 ANVFPDDTTLLIVLTAFAQLGHVEDGVVIHHYLMKKGYSLNGKLGVALIDMYSKCGSIEN 399

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+ VFE++++K VD WNA+
Sbjct: 400 AVSVFENVEQKCVDHWNAL 418


>gb|KOM57733.1| hypothetical protein LR48_Vigan11g076600 [Vigna angularis]
          Length = 618

 Score =  192 bits (488), Expect = 8e-47
 Identities = 89/139 (64%), Positives = 113/139 (81%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSW  +IDGYAK G V  A  LF+EMP +D+ISCN+MMAGYVQN + VEALKIFHDM   
Sbjct: 280 VSWVTMIDGYAKSGDVLAARRLFDEMPRRDVISCNSMMAGYVQNGYCVEALKIFHDMKRA 339

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
           + ++PD TTLLI L+A AQLGH+ +GV +HHY+ + G+ L+G+LGVALIDMYSKCGSIEN
Sbjct: 340 ANVFPDDTTLLIVLTAFAQLGHVEDGVVIHHYLMKRGYSLNGKLGVALIDMYSKCGSIEN 399

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+ VFE++++K VD WNA+
Sbjct: 400 AVSVFENVEQKCVDHWNAL 418


>ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550323642|gb|EEE99034.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 643

 Score =  192 bits (487), Expect = 1e-46
 Identities = 95/139 (68%), Positives = 114/139 (82%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWA +IDGYAK G VDIA +LF+EMPE+D+++ N MM GYVQN + +EAL IF+ M S+
Sbjct: 290 VSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSD 349

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
                D  TLLIALSAIAQLGHI++GV +H +IEE GF L GRLGVALIDMYSKCGSIEN
Sbjct: 350 GNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIEN 409

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A++VFE+IKEKSVD WNA+
Sbjct: 410 AMMVFENIKEKSVDHWNAI 428


>gb|AKH05187.1| chlororespiratory reduction 4 [Monsonia marlothii]
          Length = 638

 Score =  190 bits (483), Expect = 3e-46
 Identities = 91/139 (65%), Positives = 111/139 (79%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWA +IDGYAK GS++IA A+F +MP++D+++CN MMA Y+QN  F+EAL  FH M +E
Sbjct: 288 VSWASMIDGYAKSGSIEIAAAMFEKMPDRDVVACNAMMARYLQNGLFMEALTTFHYMKAE 347

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
             L PD TTL I LSAIAQLGH++EG+ +H YIEEN   L G++GVALIDMYSKCGSIEN
Sbjct: 348 CNLIPDATTLSIVLSAIAQLGHLDEGIAIHVYIEENRVFLGGKVGVALIDMYSKCGSIEN 407

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+LVF DIK K VD WNAM
Sbjct: 408 AMLVFGDIKVKDVDHWNAM 426



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMP--EKDIISCNTMMAGYVQNRHFVE-ALKIFHDM 249
           VS+  +IDGY K G +D A  LF+ MP  EK++ S N+M+ GY Q++  +  A K+F +M
Sbjct: 192 VSYNSMIDGYVKCGMIDSARLLFDCMPVEEKNLNSWNSMIFGYAQSKDGLGIARKVFDEM 251

Query: 248 LSESKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGS 69
                   D  +    +    + G + +   L   + +   +       ++ID Y+K GS
Sbjct: 252 PER-----DLVSWNSMIDGYVKCGKMEDAHELFDRMPKRDAV----SWASMIDGYAKSGS 302

Query: 68  IENALLVFEDIKEKSVDLWNAM 3
           IE A  +FE + ++ V   NAM
Sbjct: 303 IEIAAAMFEKMPDRDVVACNAM 324


>ref|XP_007155354.1| hypothetical protein PHAVU_003G194000g [Phaseolus vulgaris]
           gi|561028708|gb|ESW27348.1| hypothetical protein
           PHAVU_003G194000g [Phaseolus vulgaris]
          Length = 618

 Score =  190 bits (483), Expect = 3e-46
 Identities = 88/139 (63%), Positives = 112/139 (80%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSW  +IDGYAK G V  A  LF+EMP +D+ISCN+MMAGYVQN + VEALKIFHDM   
Sbjct: 280 VSWVTMIDGYAKSGDVLAARRLFDEMPRRDVISCNSMMAGYVQNGYCVEALKIFHDMKRA 339

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
             ++PD TTLLI L+A AQLGH+ +GV +HHY+ + G+ L+G+LGVALIDMYSKCGSIE+
Sbjct: 340 GNVFPDDTTLLIVLTAFAQLGHVEDGVVIHHYLMKKGYSLNGKLGVALIDMYSKCGSIED 399

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+ VFE++++K VD WNA+
Sbjct: 400 AISVFENVEQKCVDHWNAL 418


>gb|AKH05198.1| chlororespiratory reduction 4 [Pelargonium transvaalense]
          Length = 638

 Score =  190 bits (482), Expect = 4e-46
 Identities = 92/139 (66%), Positives = 112/139 (80%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWA +IDGYAKLGSV+IA A+F +MP +D+I+CN MMAGY+QNR F+EAL +F  M+ E
Sbjct: 286 VSWASMIDGYAKLGSVEIAAAMFKQMPNRDVIACNAMMAGYLQNRFFMEALAVFDYMIGE 345

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
             L PD TTLLI LSAIAQLG+++EG  +H YIE N   L G+LGVALIDMYSKCGSIE+
Sbjct: 346 CNLKPDATTLLIVLSAIAQLGYLDEGRNIHGYIEANRISLGGKLGVALIDMYSKCGSIED 405

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+ VF +I+EK VD WNAM
Sbjct: 406 AMSVFGNIEEKDVDHWNAM 424


>ref|XP_011034218.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Populus euphratica]
          Length = 641

 Score =  190 bits (482), Expect = 4e-46
 Identities = 94/139 (67%), Positives = 112/139 (80%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWA +IDGYAK G VDIA  LF+EMPE+D+++CN MM GYVQN + +EAL IF+ MLS 
Sbjct: 288 VSWANMIDGYAKNGRVDIARCLFDEMPERDVVACNAMMGGYVQNGYCMEALGIFYGMLSA 347

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
             +  D  TLLIALSAIAQLGHI++GV +H +IEE GF L GRLGV LI MYSKCGSIEN
Sbjct: 348 GNILLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVGLIYMYSKCGSIEN 407

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A++VFE+IK KSVD WNA+
Sbjct: 408 AMMVFENIKGKSVDHWNAI 426


>gb|AKH05185.1| chlororespiratory reduction 4 [Hypseocharis bilobata]
          Length = 635

 Score =  189 bits (481), Expect = 5e-46
 Identities = 92/139 (66%), Positives = 109/139 (78%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWA +IDGYAKLGS++IA  LF +MPE+D+I+CN MMAGY+QN  F+EAL ++H M  E
Sbjct: 285 VSWASMIDGYAKLGSINIAKDLFEKMPERDVIACNAMMAGYLQNGLFMEALGVYHYMKGE 344

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
             L PD  TLLI LSAIA LGH++EGV +H YIEE    L G+LGVALIDMYSKCGSIEN
Sbjct: 345 CNLIPDGVTLLIVLSAIAHLGHLDEGVAIHGYIEEKEISLDGKLGVALIDMYSKCGSIEN 404

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           ALLVF  I+E+ VD WN M
Sbjct: 405 ALLVFASIEERDVDYWNVM 423


>gb|AKH05196.1| chlororespiratory reduction 4, partial [Pelargonium nanum]
          Length = 501

 Score =  189 bits (479), Expect = 9e-46
 Identities = 94/139 (67%), Positives = 109/139 (78%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWA +IDGYAKLGSV+IA A+F +MP +D+I CN MMAGYV+N  F EAL +F  M  E
Sbjct: 145 VSWASMIDGYAKLGSVEIAAAMFKKMPNRDVIDCNAMMAGYVRNGFFKEALAVFEYMRVE 204

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
             L PD TTLLI LSAIAQLGH+NEG  +H YIE N   L G+LGVALIDMYSKCGSIE+
Sbjct: 205 CNLNPDATTLLIVLSAIAQLGHLNEGRDIHGYIEVNRISLGGKLGVALIDMYSKCGSIEH 264

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+LVF +I+EK VD WNAM
Sbjct: 265 AMLVFGNIEEKDVDHWNAM 283



 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMP--EKDIISCNTMMAGYVQNRHFVE-ALKIFHDM 249
           V ++ +IDGY K G +D A  LF+ MP  +K++ S N+M+ GY Q+   ++ A K+F DM
Sbjct: 49  VPYSSMIDGYVKCGMIDSARLLFDRMPLEDKNLNSWNSMICGYAQSEDGLKVAWKLFDDM 108

Query: 248 LSESKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGS 69
                   D+ +    +    + G + +   L   + +   +       ++ID Y+K GS
Sbjct: 109 PER-----DSVSWNSMIDGCIKCGKMEDARRLFDRMPKRDVV----SWASMIDGYAKLGS 159

Query: 68  IENALLVFEDIKEKSVDLWNAM 3
           +E A  +F+ +  + V   NAM
Sbjct: 160 VEIAAAMFKKMPNRDVIDCNAM 181


>gb|AKH05188.1| chlororespiratory reduction 4 [Monsonia emarginata]
          Length = 638

 Score =  189 bits (479), Expect = 9e-46
 Identities = 93/139 (66%), Positives = 110/139 (79%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMPEKDIISCNTMMAGYVQNRHFVEALKIFHDMLSE 240
           VSWA +IDGYAK GS++IA A+F EM  +D+I+CNTMMAGY+QN   +EAL  FH M  E
Sbjct: 288 VSWASMIDGYAKSGSIEIAAAMFEEMLGRDVIACNTMMAGYLQNGLSMEALATFHYMKGE 347

Query: 239 SKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGSIEN 60
             L PD TTL I LSAIAQLGH++EG+ +H Y+EEN  IL G++GVALIDMYSKCGSIEN
Sbjct: 348 CNLIPDATTLSIVLSAIAQLGHLDEGIAIHGYMEENRVILGGKVGVALIDMYSKCGSIEN 407

Query: 59  ALLVFEDIKEKSVDLWNAM 3
           A+LVF DIK K VD WNAM
Sbjct: 408 AMLVFGDIKIKEVDHWNAM 426



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
 Frame = -1

Query: 419 VSWAIVIDGYAKLGSVDIATALFNEMP--EKDIISCNTMMAGYVQNRHFVE-ALKIFHDM 249
           VS+  +IDGY K G +D A  LF+ MP  EK++ S N+M+ GY Q +  +E A K+F +M
Sbjct: 192 VSYNSMIDGYVKCGMIDSARLLFDSMPVEEKNLNSWNSMIFGYAQYKDGLEIARKVFDEM 251

Query: 248 LSESKLYPDTTTLLIALSAIAQLGHINEGVTLHHYIEENGFILSGRLGVALIDMYSKCGS 69
                   D  +    +    + G +     L + + +   +       ++ID Y+K GS
Sbjct: 252 PER-----DLVSWNSMIDGYVKCGKMEGAHELFNRMPKRDAV----SWASMIDGYAKSGS 302

Query: 68  IENALLVFEDIKEKSVDLWNAM 3
           IE A  +FE++  + V   N M
Sbjct: 303 IEIAAAMFEEMLGRDVIACNTM 324


Top