BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00034764
         (522 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul...    92   1e-22
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    91   2e-22
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...    92   5e-22
emb|CDP17738.1| unnamed protein product [Coffea canephora]             86   6e-21
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    62   5e-11
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]    53   8e-11
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                   63   2e-10
ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group] g...    63   3e-10
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...    62   6e-10
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...    62   1e-09
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...    61   2e-09
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]            61   2e-09
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...    61   2e-09
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...    61   2e-09
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]               57   2e-09
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]    57   2e-09
emb|CAE03833.3| OSJNBb0013J13.10 [Oryza sativa Japonica Group]         60   2e-09
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...    60   3e-09
gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subc...    60   3e-09
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               55   6e-09

>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
          Length = 324

 Score = 91.7 bits (226), Expect(2) = 1e-22
 Identities = 56/144 (38%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
 Frame = -3

Query: 418 KDEVKFSDVSNALVNNEYRKKDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXXXXX 239
           KD V    V +AL ++E RK+D+   + +TSE   V RG   +                 
Sbjct: 147 KDNVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVTRGGQQSQTKERRGMCKSKGRV-- 204

Query: 238 XXXXXXRLAKDECAYCHQKGYRTKDCPNKDKS-----NVNVAR-KADDEEESVFMVS-SS 80
                  +AKDECA+CH+KG+  KDCP   K      + NVA  K+D E +   +VS S+
Sbjct: 205 -------VAKDECAFCHEKGHWKKDCPKLQKKEKVPQDANVAECKSDVESDISLIVSLSA 257

Query: 79  DSQDDSWILDSRCSYHMCPNR*WF 8
            S  D WILDS C+YHMCP R WF
Sbjct: 258 SSYPDEWILDSGCTYHMCPIRDWF 281



 Score = 41.2 bits (95), Expect(2) = 1e-22
 Identities = 18/33 (54%), Positives = 26/33 (78%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLLYRK 417
           LDV+  DED AL+L++SLP+ ++HL T LL+ K
Sbjct: 115 LDVKFEDEDLALMLVSSLPDEFEHLETTLLHGK 147


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 91.3 bits (225), Expect(2) = 2e-22
 Identities = 57/144 (39%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
 Frame = -3

Query: 418 KDEVKFSDVSNALVNNEYRKKDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXXXXX 239
           K+ V    V +AL ++E RK+D+   + +TSE   VARGR  +                 
Sbjct: 108 KENVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVARGRQQSQTKERRGMSKSKGRA-- 165

Query: 238 XXXXXXRLAKDECAYCHQKGYRTKDCPNKDKS-----NVNVAR-KADDEEESVFMVSSSD 77
                  +AKDECA+CH+KG+  KDCP   K      + NVA  K+D E +   +VS S 
Sbjct: 166 -------VAKDECAFCHEKGHWKKDCPKLQKKEKVLQDANVAECKSDVESDISLIVSLSA 218

Query: 76  SQD-DSWILDSRCSYHMCPNR*WF 8
           S   D WILDS C+YHMCP R WF
Sbjct: 219 SLYLDEWILDSGCTYHMCPIRDWF 242



 Score = 40.8 bits (94), Expect(2) = 2e-22
 Identities = 18/32 (56%), Positives = 25/32 (78%)
 Frame = -2

Query: 512 DVEIVDEDKALLLLNSLPENYDHLTTNLLYRK 417
           DV+  DED AL+LL+SLP+ ++HL T LL+ K
Sbjct: 77  DVKFEDEDLALMLLSSLPDEFEHLETTLLHGK 108


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score = 92.4 bits (228), Expect(2) = 5e-22
 Identities = 56/144 (38%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
 Frame = -3

Query: 418 KDEVKFSDVSNALVNNEYRKKDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXXXXX 239
           K+ V    V +AL ++E RK+D+   + +TSE   V RGR  +                 
Sbjct: 107 KENVSLDAVCSALYSHELRKQDKMRTKSTTSEEALVIRGRQQSQTKERRGMSKSKGRV-- 164

Query: 238 XXXXXXRLAKDECAYCHQKGYRTKDCPNKDKS-----NVNVAR-KADDEEESVFMVS-SS 80
                  +AKDECA+CH+KG+  KDCP   K      + NVA  K+D E +   +VS S+
Sbjct: 165 -------VAKDECAFCHEKGHWKKDCPKLQKKEKVPQDANVAECKSDVESDISLIVSLSA 217

Query: 79  DSQDDSWILDSRCSYHMCPNR*WF 8
            S  D WILDS C+YHMCP R WF
Sbjct: 218 SSYPDEWILDSGCTYHMCPIRDWF 241



 Score = 38.5 bits (88), Expect(2) = 5e-22
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = -2

Query: 509 VEIVDEDKALLLLNSLPENYDHLTTNLLYRK 417
           V+  DED AL+LL+SLP+ ++HL T LL+ K
Sbjct: 77  VKFEDEDLALMLLSSLPDEFEHLETTLLHGK 107


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score = 85.5 bits (210), Expect(2) = 6e-21
 Identities = 52/143 (36%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
 Frame = -3

Query: 418 KDEVKFSDVSNALVNNEYRKKDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXXXXX 239
           K+ V    V +AL + E RK+D+   + + ++   VARGR  +                 
Sbjct: 194 KENVSLDAVCSALYSRELRKQDKKKKKVAAADEALVARGRQQSQSKGRRGWSKSISR--- 250

Query: 238 XXXXXXRLAKDECAYCHQKGYRTKDCPNKDKS-----NVNVAR-KADDEEESVFMVSSSD 77
                  +AKDECA+C +KG+  KDCP   K      +VNVA  K+D E +    VS   
Sbjct: 251 -------VAKDECAFCREKGHWKKDCPKLKKKGKAPQDVNVAECKSDAESDFSLAVSRLT 303

Query: 76  SQDDSWILDSRCSYHMCPNR*WF 8
           S  D WILDS C+YHM P R WF
Sbjct: 304 SHPDEWILDSTCTYHMTPMREWF 326



 Score = 42.0 bits (97), Expect(2) = 6e-21
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLLYRK 417
           LDV   DED AL+LL+SLP+ ++HL T LL+ K
Sbjct: 162 LDVNFEDEDLALMLLSSLPDEFEHLETTLLHGK 194


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 62.4 bits (150), Expect(2) = 5e-11
 Identities = 43/150 (28%), Positives = 62/150 (41%), Gaps = 9/150 (6%)
 Frame = -3

Query: 424 IEKDEVKFSDVSNALVNNEYRKKDQHDYRDSTSEALTVA--RGRTNNXXXXXXXXXXXXX 251
           + KD V   +V +AL + E R K      D     L  +  +GR N              
Sbjct: 162 VGKDTVSLEEVRSALHSRELRHKANGTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKGAKP 221

Query: 250 XXXXXXXXXXRLAKDECAYCHQKGYRTKDCPNKDKSNVN------VARKADDEEESVFMV 89
                         D C YC +KG+   DCP K K +        VA +  + EE + +V
Sbjct: 222 D-------------DVCNYCKEKGHWKFDCPKKKKQSEKQSVSAAVAEEDTNSEEDIALV 268

Query: 88  SSSDSQ-DDSWILDSRCSYHMCPNR*WFSS 2
           +   +   D W+LDS  SYH+CP R WF++
Sbjct: 269 ADEHTHHSDVWVLDSGASYHICPRREWFTT 298



 Score = 31.6 bits (70), Expect(2) = 5e-11
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLLYRK 417
           +DV+I DED AL+LL SLP ++++   + +  K
Sbjct: 132 IDVKIEDEDAALILLVSLPMSFENFVQSFIVGK 164


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score = 53.1 bits (126), Expect(2) = 8e-11
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 5/144 (3%)
 Frame = -3

Query: 418 KDEVKFSDVSNALVNNEYRKKDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXXXXX 239
           KD++ F DV NAL       K         S + + ++G+ +                  
Sbjct: 79  KDDITFDDVQNALNAKVLDMKSSDKTNGGKSRSKSKSKGKKDYRNV-------------- 124

Query: 238 XXXXXXRLAKDECAYCHQKGYRTKDCPNKDKSNVNVARKA-----DDEEESVFMVSSSDS 74
                      +C +C++ G   + CP++ +     A+ +     D  + +  +    + 
Sbjct: 125 -----------KCYHCNKIGQIRRICPDRQQEEKTQAQGSAAIIDDGYDSTEVLTIRLNP 173

Query: 73  QDDSWILDSRCSYHMCPNR*WFSS 2
             + W+LDS C+YHMCP R WFSS
Sbjct: 174 NHEEWVLDSGCTYHMCPRRDWFSS 197



 Score = 40.0 bits (92), Expect(2) = 8e-11
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLLYRK 417
           LD+++ DEDKA++LLNSLP++  H    L Y K
Sbjct: 47  LDIKVEDEDKAIILLNSLPKSLKHFKETLKYGK 79


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 62.8 bits (151), Expect(2) = 2e-10
 Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 16/152 (10%)
 Frame = -3

Query: 415 DEVKFSDVSNALVNNEYRKKDQHDYRDSTS--EALTVARGRTNNXXXXXXXXXXXXXXXX 242
           D + F+DV+ A++  E R+K++ D +DS+   EALTV RGR+                  
Sbjct: 165 DRLSFNDVAGAILEEESRRKNKEDRQDSSKQMEALTVTRGRSTERGPSGSQNHGRSTSRR 224

Query: 241 XXXXXXXRLAKDECAYCHQKGYRTKDCPNKDKSNVN----------VARKADDEE----E 104
                       +C  C ++G+  KDC +  KS             VA  +DD E    E
Sbjct: 225 KTNL--------KCYNCGKRGHLKKDCWSNKKSGEKSSEASTSQGCVASTSDDGEVLYSE 276

Query: 103 SVFMVSSSDSQDDSWILDSRCSYHMCPNR*WF 8
           +       +   D WI+DS  ++HM P R WF
Sbjct: 277 AAVSTKGKNRLTDVWIVDSGATWHMTPRRDWF 308



 Score = 28.9 bits (63), Expect(2) = 2e-10
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -2

Query: 512 DVEIVDEDKALLLLNSLPENYDHLTTNL 429
           D  I + ++A +LL SLP++YD L  N+
Sbjct: 131 DFTIGENERAEVLLQSLPDSYDQLVINI 158


>ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group]
           gi|255676990|dbj|BAH93480.1| Os06g0316600 [Oryza sativa
           Japonica Group]
          Length = 759

 Score = 62.8 bits (151), Expect(2) = 3e-10
 Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 21/163 (12%)
 Frame = -3

Query: 427 YIEKDEVKFSDVSNALVNNEYRK------KDQHDYRDSTSEALTVARGRTNNXXXXXXXX 266
           ++ +DE+  ++V  AL N E  K       +Q  Y DS     + +RGR+          
Sbjct: 108 FLSRDELTLAEVYEALQNREKMKCMVRGRSEQRTYNDSNDRDKSQSRGRSKPR------- 160

Query: 265 XXXXXXXXXXXXXXXRLAKDECAYCHQKGYRTKDC---PNKDKSNVNVARKADDEEESVF 95
                             K  C YC +K +  ++C    NK+K      RK D +   V 
Sbjct: 161 -----------------GKKFCKYCKKKNHFIEECWKLQNKEK------RKYDGKASVVT 197

Query: 94  MVSSSDSQD------------DSWILDSRCSYHMCPNR*WFSS 2
              +SDS D            D WILD+ CS+H+C NR WFSS
Sbjct: 198 SADNSDSGDCLVVFAGCVASHDEWILDTACSFHICINRDWFSS 240



 Score = 28.5 bits (62), Expect(2) = 3e-10
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENY 450
           +DV+  DED  LLLL SLP +Y
Sbjct: 79  MDVQFDDEDLGLLLLCSLPSSY 100


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score = 62.0 bits (149), Expect(2) = 6e-10
 Identities = 50/157 (31%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
 Frame = -3

Query: 424 IEKDEVKFSDVSNALVNNEYRK-KDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXX 248
           + +DE+  ++V  AL N E  K   Q D   S  EAL V RGR+                
Sbjct: 166 LSRDELTLAEVYEALQNREKMKGMVQSDASSSKGEALQV-RGRSEQRTYNDSSDRDKSQS 224

Query: 247 XXXXXXXXXRLAKDECAYCHQKGYRTKDC---PNKDKSNVNVARKADDEEESVFMVSSSD 77
                       K  C YC +K +  ++C    NK+K      RK+D +   V    +SD
Sbjct: 225 RGRSKSR----GKKFCKYCKKKNHFIEECWKLQNKEK------RKSDGKASVVTSAENSD 274

Query: 76  SQD------------DSWILDSRCSYHMCPNR*WFSS 2
           S D            D WILD+ CS+H+C NR WFSS
Sbjct: 275 SGDCLVVFAGCVASHDEWILDTACSFHICINRDWFSS 311



 Score = 28.1 bits (61), Expect(2) = 6e-10
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLL 426
           ++V+  DED  LLLL SLP +Y +    +L
Sbjct: 136 IEVQFDDEDLGLLLLCSLPSSYANFRDTIL 165


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53370655|gb|AAU89150.1| integrase core domain
           containing protein [Oryza sativa Japonica Group]
           gi|108710286|gb|ABF98081.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1322

 Score = 61.6 bits (148), Expect(2) = 1e-09
 Identities = 45/156 (28%), Positives = 63/156 (40%), Gaps = 15/156 (9%)
 Frame = -3

Query: 424 IEKDEVKFSDVSNALVNNEYRKKDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXXX 245
           + +DE+  ++V  AL N E  K     Y  S+       RGR+                 
Sbjct: 166 LSRDELTLAEVYEALQNREKMKGMVQSYASSSKGEALQVRGRSEQRTYNDSNDHDKSQSR 225

Query: 244 XXXXXXXXRLAKDECAYCHQKGYRTKDC---PNKDKSNVNVARKADDEEESVFMVSSSDS 74
                      K  C YC +K +  ++C    NK+K      RK+D +   V    +SDS
Sbjct: 226 GRSKSR----GKKFCKYCKKKNHFIEECWKLQNKEK------RKSDGKASVVTSAENSDS 275

Query: 73  QD------------DSWILDSRCSYHMCPNR*WFSS 2
            D            D WILD+ CS+H+C NR WFSS
Sbjct: 276 GDCLVVFAGYVASHDEWILDTACSFHICINRDWFSS 311



 Score = 27.7 bits (60), Expect(2) = 1e-09
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLL 426
           ++V+  DED  LLLL SLP +Y +    +L
Sbjct: 136 MEVQFDDEDLGLLLLCSLPSSYANFRHTIL 165


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549942|gb|ABA92739.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1373

 Score = 60.8 bits (146), Expect(2) = 2e-09
 Identities = 45/153 (29%), Positives = 62/153 (40%), Gaps = 12/153 (7%)
 Frame = -3

Query: 424 IEKDEVKFSDVSNALVNNEYRK-KDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXX 248
           + +DE+   +V +AL N E  K   Q+D   S+       RGRT N              
Sbjct: 162 LSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRRGRS 221

Query: 247 XXXXXXXXXRLAKDECAYCHQKGYRTKDCP--------NKDKSNVNVARKA---DDEEES 101
                       K  C YC  K +   +C         NK    V+VA  A   DD  + 
Sbjct: 222 KSKPPGN-----KKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDC 276

Query: 100 VFMVSSSDSQDDSWILDSRCSYHMCPNR*WFSS 2
           + + +   +  D WILDS CS+H+C  R WFSS
Sbjct: 277 LVVFAGCVAGHDEWILDSACSFHICTKRNWFSS 309



 Score = 27.3 bits (59), Expect(2) = 2e-09
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLL 426
           ++V+  DED  LLLL SLP +Y +    +L
Sbjct: 132 MEVKYDDEDLGLLLLCSLPNSYANFRDTIL 161


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score = 60.8 bits (146), Expect(2) = 2e-09
 Identities = 45/153 (29%), Positives = 62/153 (40%), Gaps = 12/153 (7%)
 Frame = -3

Query: 424 IEKDEVKFSDVSNALVNNEYRK-KDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXX 248
           + +DE+   +V +AL N E  K   Q+D   S+       RGRT N              
Sbjct: 164 LSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRGRTENKTSNEKNYDRRGRS 223

Query: 247 XXXXXXXXXRLAKDECAYCHQKGYRTKDCP--------NKDKSNVNVARKA---DDEEES 101
                       K  C YC  K +   +C         NK    V+VA  A   DD  + 
Sbjct: 224 KSKPPGN-----KKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAVSDDDSGDC 278

Query: 100 VFMVSSSDSQDDSWILDSRCSYHMCPNR*WFSS 2
           + + +   +  D WILDS CS+H+C  R WFSS
Sbjct: 279 LVVFAGCVAGHDEWILDSACSFHICTKRNWFSS 311



 Score = 27.3 bits (59), Expect(2) = 2e-09
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLL 426
           ++V+  DED  LLLL SLP +Y +    +L
Sbjct: 134 MEVKYDDEDLGLLLLCSLPNSYANFRDTIL 163


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score = 60.8 bits (146), Expect(2) = 2e-09
 Identities = 45/153 (29%), Positives = 62/153 (40%), Gaps = 12/153 (7%)
 Frame = -3

Query: 424 IEKDEVKFSDVSNALVNNEYRK-KDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXX 248
           + +DE+   +V +AL N E  K   Q+D   S+       RGRT N              
Sbjct: 162 LSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRRGRS 221

Query: 247 XXXXXXXXXRLAKDECAYCHQKGYRTKDCP--------NKDKSNVNVARKA---DDEEES 101
                       K  C YC  K +   +C         NK    V+VA  A   DD  + 
Sbjct: 222 KSKPPGN-----KKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDC 276

Query: 100 VFMVSSSDSQDDSWILDSRCSYHMCPNR*WFSS 2
           + + +   +  D WILDS CS+H+C  R WFSS
Sbjct: 277 LVVFAGCVAGHDEWILDSACSFHICTKRNWFSS 309



 Score = 27.3 bits (59), Expect(2) = 2e-09
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLL 426
           ++V+  DED  LLLL SLP +Y +    +L
Sbjct: 132 MEVKYDDEDLGLLLLCSLPNSYANFRDTIL 161


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score = 60.8 bits (146), Expect(2) = 2e-09
 Identities = 45/153 (29%), Positives = 62/153 (40%), Gaps = 12/153 (7%)
 Frame = -3

Query: 424 IEKDEVKFSDVSNALVNNEYRK-KDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXX 248
           + +DE+   +V +AL N E  K   Q+D   S+       RGRT N              
Sbjct: 162 LSRDELTLKEVYDALQNKEKMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRRGRS 221

Query: 247 XXXXXXXXXRLAKDECAYCHQKGYRTKDCP--------NKDKSNVNVARKA---DDEEES 101
                       K  C YC  K +   +C         NK    V+VA  A   DD  + 
Sbjct: 222 KSKPPGN-----KKFCVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDC 276

Query: 100 VFMVSSSDSQDDSWILDSRCSYHMCPNR*WFSS 2
           + + +   +  D WILDS CS+H+C  R WFSS
Sbjct: 277 LVVFAGCVAGHDEWILDSACSFHICTKRNWFSS 309



 Score = 27.3 bits (59), Expect(2) = 2e-09
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLL 426
           ++V+  DED  LLLL SLP +Y +    +L
Sbjct: 132 MEVKYDDEDLGLLLLCSLPNSYANFRDTIL 161


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 56.6 bits (135), Expect(2) = 2e-09
 Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 16/154 (10%)
 Frame = -3

Query: 415 DEVKFSDVSNALVNNEYRKKDQHDYRDST--SEALTVARGRTNNXXXXXXXXXXXXXXXX 242
           D + F DV+ A++  E R+K++ +  +S+  +EALT+ RGR+                  
Sbjct: 165 DTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRR 224

Query: 241 XXXXXXXRLAKDECAYCHQKGYRTKDCPNKDKSNVN----------VARKADDEE----E 104
                       +C  C  KG+  K+C N  K+             VA  +DD E    E
Sbjct: 225 KNNI--------KCYGCGMKGHVKKECWNNKKNGEKNSEATTSQGCVASTSDDGEILYSE 276

Query: 103 SVFMVSSSDSQDDSWILDSRCSYHMCPNR*WFSS 2
           +          +D WI+DS  ++HM P+R WF S
Sbjct: 277 AATSSEGERQLNDVWIMDSGATWHMTPHRDWFYS 310



 Score = 31.6 bits (70), Expect(2) = 2e-09
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -2

Query: 512 DVEIVDEDKALLLLNSLPENYDHLTTNL 429
           D +I + ++A LLL SLP++YD L  N+
Sbjct: 131 DFKIAENERAELLLQSLPDSYDQLIINI 158


>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
          Length = 947

 Score = 57.0 bits (136), Expect(2) = 2e-09
 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
 Frame = -3

Query: 418 KDEVKFSDVSNALVNNEYRKKDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXXXXX 239
           +D + F +V + L   E +K  Q + +D + E L + RGR +                  
Sbjct: 211 RDSMTFDEVQSILHPRELQK--QEESKDESGEGLNI-RGRYDKREKKCKNLKAKSKSNTK 267

Query: 238 XXXXXXRLAKDECAYCHQKGYRTKDCPNKDKSNVNVARKADD--------EEESVFMVSS 83
                    K +C  CH++G+  KDC +K ++ +       D        +   V  V+ 
Sbjct: 268 ---------KFKCFICHKEGHFKKDCSDKRQNTIKKTVNEGDAAVILDGYDSAKVLNVAE 318

Query: 82  SDSQDDSWILDSRCSYHMCPNR*WF 8
            DS  + WILDS CS+HMCP + WF
Sbjct: 319 MDSGKE-WILDSGCSFHMCPIKAWF 342



 Score = 31.2 bits (69), Expect(2) = 2e-09
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLLY 423
           +D+ + +EDKA+LLL SL  +Y ++   ++Y
Sbjct: 179 IDITVSNEDKAILLLTSLDASYTNMKEAIMY 209


>emb|CAE03833.3| OSJNBb0013J13.10 [Oryza sativa Japonica Group]
          Length = 500

 Score = 59.7 bits (143), Expect(2) = 2e-09
 Identities = 49/157 (31%), Positives = 66/157 (42%), Gaps = 16/157 (10%)
 Frame = -3

Query: 424 IEKDEVKFSDVSNALVNNEYRK-KDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXX 248
           + +DEV  ++V  AL N E  K   Q D   S  EAL V +GR+                
Sbjct: 109 LSRDEVTLAEVYEALQNREKMKGMVQSDASSSKGEALLV-KGRSEQRTYNDSNDRDKSQS 167

Query: 247 XXXXXXXXXRLAKDECAYCHQKGYRTKDC---PNKDKSNVNVARKADDEEESVFMVSSSD 77
                       K  C YC +K +  ++C    NKD       RK+D +   V    +S+
Sbjct: 168 RGRSKST----GKKFCKYCKKKNHFIEECWKLQNKDN------RKSDGKASVVTSAENSN 217

Query: 76  SQD------------DSWILDSRCSYHMCPNR*WFSS 2
           S D            D WILD+ CS+H+C NR WFSS
Sbjct: 218 SGDCLVVFAGCVASHDEWILDTACSFHICINRDWFSS 254



 Score = 28.5 bits (62), Expect(2) = 2e-09
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLL 426
           ++V+  DED  LLLL SLP +Y +    +L
Sbjct: 79  MEVQFDDEDLGLLLLCSLPSSYTNFCDTIL 108


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1175

 Score = 59.7 bits (143), Expect(2) = 3e-09
 Identities = 49/157 (31%), Positives = 66/157 (42%), Gaps = 16/157 (10%)
 Frame = -3

Query: 424 IEKDEVKFSDVSNALVNNEYRK-KDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXX 248
           + + E+  ++V  AL N E  K   Q D   S  EAL V RGR+                
Sbjct: 61  LSRSELTLAEVYEALQNREKMKGMVQSDASSSKGEALQV-RGRSEQRTYNDSNDRDKNQS 119

Query: 247 XXXXXXXXXRLAKDECAYCHQKGYRTKDC---PNKDKSNVNVARKADDEEESVFMVSSSD 77
                       K  C YC +K +  ++C    NK+K      RK+D +   V    +SD
Sbjct: 120 RGRSKSR----GKKFCKYCKKKNHFIEECWKLQNKEK------RKSDGKASVVTSADNSD 169

Query: 76  SQD------------DSWILDSRCSYHMCPNR*WFSS 2
           S D            D WILD+ CS+H+C NR WFSS
Sbjct: 170 SGDCLVVFVVCVSSHDEWILDTTCSFHICINRDWFSS 206



 Score = 28.1 bits (61), Expect(2) = 3e-09
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLL 426
           ++V+  DED  LLLL SLP +Y +    +L
Sbjct: 31  MEVQFDDEDLGLLLLCSLPSSYANFRDTIL 60


>gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1136

 Score = 59.7 bits (143), Expect(2) = 3e-09
 Identities = 50/157 (31%), Positives = 65/157 (41%), Gaps = 16/157 (10%)
 Frame = -3

Query: 424 IEKDEVKFSDVSNALVNNEYRK-KDQHDYRDSTSEALTVARGRTNNXXXXXXXXXXXXXX 248
           +  DE+  ++V  AL N E  K   Q D   S  EAL V RGR                 
Sbjct: 88  LSHDELTLAEVYEALQNREKMKGMVQSDASSSKGEALQV-RGRFERRTYNDSNDHDKSQS 146

Query: 247 XXXXXXXXXRLAKDECAYCHQKGYRTKDC---PNKDKSNVNVARKADDEEESVFMVSSSD 77
                       K  C YC +K +  ++C    NK+K      RK+D +   V    +SD
Sbjct: 147 R----------GKKLCKYCKKKNHFIEECWNLQNKEK------RKSDGKASVVTSADNSD 190

Query: 76  SQD------------DSWILDSRCSYHMCPNR*WFSS 2
           S D            D WILD+ CS+H+C NR WFSS
Sbjct: 191 SGDCLVVFAGCVANHDEWILDTACSFHICINRDWFSS 227



 Score = 28.1 bits (61), Expect(2) = 3e-09
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 515 LDVEIVDEDKALLLLNSLPENYDHLTTNLL 426
           ++V+  DED  LLLL SLP +Y +    +L
Sbjct: 58  MEVQFDDEDLGLLLLCSLPSSYANFRDTIL 87


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 55.1 bits (131), Expect(2) = 6e-09
 Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 16/154 (10%)
 Frame = -3

Query: 415 DEVKFSDVSNALVNNEYRKKDQHDYRDST--SEALTVARGRTNNXXXXXXXXXXXXXXXX 242
           D + F DV+ A++  E R+K++ +  +S+  +EALT+ RGR+                  
Sbjct: 165 DTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRR 224

Query: 241 XXXXXXXRLAKDECAYCHQKGYRTKDCPNKDKSNVN----------VARKADDEE----E 104
                       +C  C  KG+  K+C N  K+             VA  +DD E    E
Sbjct: 225 KKNI--------KCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSE 276

Query: 103 SVFMVSSSDSQDDSWILDSRCSYHMCPNR*WFSS 2
           +          +D WI+DS  ++HM P+R WF S
Sbjct: 277 AATSSKGERRLNDVWIMDSGATWHMTPHRDWFFS 310



 Score = 31.6 bits (70), Expect(2) = 6e-09
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -2

Query: 512 DVEIVDEDKALLLLNSLPENYDHLTTNL 429
           D +I + ++A LLL SLP++YD L  N+
Sbjct: 131 DFKIAENERAELLLQSLPDSYDQLIINI 158