BLASTX nr result

ID: Cornus23_contig00034731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00034731
         (304 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009625563.1| PREDICTED: 5'-3' exoribonuclease 4-like [Nic...    84   5e-14
ref|XP_008784686.1| PREDICTED: 5'-3' exoribonuclease 4-like isof...    82   2e-13
ref|XP_010096460.1| 5'-3' exoribonuclease 4 [Morus notabilis] gi...    80   5e-13
emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]    80   5e-13
ref|XP_009760133.1| PREDICTED: 5'-3' exoribonuclease 3-like, par...    80   8e-13
ref|XP_011075832.1| PREDICTED: 5'-3' exoribonuclease 3-like [Ses...    78   2e-12
ref|XP_009391182.1| PREDICTED: 5'-3' exoribonuclease 4-like isof...    77   4e-12
ref|XP_009391174.1| PREDICTED: 5'-3' exoribonuclease 4-like isof...    77   4e-12
emb|CDP04955.1| unnamed protein product [Coffea canephora]             75   2e-11
ref|XP_006850709.2| PREDICTED: 5'-3' exoribonuclease 4 [Amborell...    75   3e-11
gb|ERN12290.1| hypothetical protein AMTR_s00025p00023010 [Ambore...    75   3e-11
ref|XP_011011031.1| PREDICTED: 5'-3' exoribonuclease 4-like isof...    70   5e-10
ref|XP_011011030.1| PREDICTED: 5'-3' exoribonuclease 4-like isof...    70   5e-10
ref|XP_011011029.1| PREDICTED: 5'-3' exoribonuclease 4-like isof...    70   5e-10
ref|XP_011011028.1| PREDICTED: 5'-3' exoribonuclease 4-like isof...    70   5e-10
ref|XP_006375953.1| hypothetical protein POPTR_0013s06730g [Popu...    66   1e-08
ref|XP_006375952.1| hypothetical protein POPTR_0013s06730g [Popu...    66   1e-08
emb|CBI26575.3| unnamed protein product [Vitis vinifera]               65   2e-08
ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit...    65   2e-08
ref|XP_010277316.1| PREDICTED: 5'-3' exoribonuclease 4 isoform X...    63   8e-08

>ref|XP_009625563.1| PREDICTED: 5'-3' exoribonuclease 4-like [Nicotiana tomentosiformis]
          Length = 292

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = -3

Query: 302 SFHTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPI-RKSVSGPGLAR 126
           SFH HIP+PP+GVIMP K I +  VQP P+LWHE+ A+   +Y+ R I   SVSGP LAR
Sbjct: 168 SFHPHIPRPPKGVIMPRKVISEDVVQPQPLLWHEKTAVAEHRYSRRYIPHNSVSGPRLAR 227

Query: 125 VAHGLVSKYHTAKRQ 81
           +AH LVS+    K Q
Sbjct: 228 LAHQLVSENSLLKHQ 242


>ref|XP_008784686.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X1 [Phoenix
           dactylifera]
          Length = 925

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 39/72 (54%), Positives = 53/72 (73%)
 Frame = -3

Query: 290 HIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVSGPGLARVAHGL 111
           HIP+ P GVI+P KSI KQD+QP P+LWHE  AL  R Y+ER I  S++GP L+++A  L
Sbjct: 720 HIPRLPGGVILPKKSITKQDMQPAPVLWHEVTALRRRIYSERLISNSIAGPHLSKMARRL 779

Query: 110 VSKYHTAKRQES 75
           VS Y+  ++Q+S
Sbjct: 780 VSNYYHEQKQQS 791


>ref|XP_010096460.1| 5'-3' exoribonuclease 4 [Morus notabilis]
           gi|587875243|gb|EXB64360.1| 5'-3' exoribonuclease 4
           [Morus notabilis]
          Length = 1572

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 41/92 (44%), Positives = 56/92 (60%)
 Frame = -3

Query: 299 FHTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVSGPGLARVA 120
           F  HIP+PPE V  P K I K+D++P P LWHE+ A+ GR ++  PIR SVSG  LA+ A
Sbjct: 687 FLGHIPRPPEKVAWPSKCICKKDIKPKPFLWHEQTAVVGRLHSLMPIRNSVSGSHLAKSA 746

Query: 119 HGLVSKYHTAKRQESMGSMKIEEHIGVDDLAC 24
             LV  +    +Q+S GS++  E    D + C
Sbjct: 747 RQLVLTWCLEMQQKSTGSLEGGEGASADGVLC 778


>emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]
          Length = 1102

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 41/73 (56%), Positives = 53/73 (72%)
 Frame = -3

Query: 221  PPILWHERLALFGRKYTERPIRKSVSGPGLARVAHGLVSKYHTAKRQESMGSMKIEEHIG 42
            PP+LWHE  A+ GRK++ERPI  SVSGP LA++AH LV +Y  AKRQE++G  ++ +HIG
Sbjct: 967  PPVLWHETSAVCGRKFSERPIPNSVSGPCLAKLAHRLVFEYCLAKRQETLGRGELSDHIG 1026

Query: 41   VDDLACQSNLKPT 3
             D L  QS  K T
Sbjct: 1027 PDTLR-QSPSKET 1038


>ref|XP_009760133.1| PREDICTED: 5'-3' exoribonuclease 3-like, partial [Nicotiana
           sylvestris]
          Length = 734

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = -3

Query: 302 SFHTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPI-RKSVSGPGLAR 126
           SFH HIP+PP+GV MP K I K  V P P+LWHE+ A+   +Y+ R I   SVSGP LA+
Sbjct: 617 SFHPHIPRPPKGVTMPRKVISKDGVHPQPLLWHEKTAVAEHRYSRRCIPHNSVSGPRLAK 676

Query: 125 VAHGLVSKYHTAKRQ 81
           +AH LVS+    K Q
Sbjct: 677 LAHQLVSENCFLKHQ 691


>ref|XP_011075832.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sesamum indicum]
           gi|747058954|ref|XP_011075833.1| PREDICTED: 5'-3'
           exoribonuclease 3-like [Sesamum indicum]
           gi|747058956|ref|XP_011075834.1| PREDICTED: 5'-3'
           exoribonuclease 3-like [Sesamum indicum]
           gi|747058958|ref|XP_011075835.1| PREDICTED: 5'-3'
           exoribonuclease 3-like [Sesamum indicum]
          Length = 814

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = -3

Query: 299 FHTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPI-RKSVSGPGLARV 123
           FH HIP+PPEGV MP KSI K D+ PP  LWHE+ A+   ++ +RPI  KS++GP LA++
Sbjct: 698 FHPHIPRPPEGVNMPQKSIRKHDLLPPLALWHEKTAIGRSRFLKRPIPPKSLAGPCLAKL 757

Query: 122 AHGLVS 105
           AH LVS
Sbjct: 758 AHQLVS 763


>ref|XP_009391182.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 710

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 38/82 (46%), Positives = 59/82 (71%)
 Frame = -3

Query: 293 THIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVSGPGLARVAHG 114
           THI K P GVI+P KSI K+DVQP P+LWHER ++F RK  ERP+  +++G  L+++A  
Sbjct: 559 THISKIPSGVILPNKSISKKDVQPAPVLWHER-SMFKRKNLERPLSHAIAGHRLSQLACS 617

Query: 113 LVSKYHTAKRQESMGSMKIEEH 48
           LVS  H  +R++++   K++++
Sbjct: 618 LVSN-HYRERKQAVNVRKLDKN 638


>ref|XP_009391174.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X1 [Musa acuminata
           subsp. malaccensis]
          Length = 864

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 38/82 (46%), Positives = 59/82 (71%)
 Frame = -3

Query: 293 THIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVSGPGLARVAHG 114
           THI K P GVI+P KSI K+DVQP P+LWHER ++F RK  ERP+  +++G  L+++A  
Sbjct: 713 THISKIPSGVILPNKSISKKDVQPAPVLWHER-SMFKRKNLERPLSHAIAGHRLSQLACS 771

Query: 113 LVSKYHTAKRQESMGSMKIEEH 48
           LVS  H  +R++++   K++++
Sbjct: 772 LVSN-HYRERKQAVNVRKLDKN 792


>emb|CDP04955.1| unnamed protein product [Coffea canephora]
          Length = 600

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 37/79 (46%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = -3

Query: 302 SFHTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPI-RKSVSGPGLAR 126
           SFH HI K P+GVI  GKS+ + D+QPPPILWHE+  +   ++++R I  ++VSGP LA+
Sbjct: 488 SFHPHIAKIPKGVIRLGKSVSEHDIQPPPILWHEKTYIVRHRFSQRCIPPRAVSGPCLAK 547

Query: 125 VAHGLVSKYHTAKRQESMG 69
           +A  LVS+    K  ++ G
Sbjct: 548 MARQLVSQNCVTKLHDADG 566


>ref|XP_006850709.2| PREDICTED: 5'-3' exoribonuclease 4 [Amborella trichopoda]
          Length = 1187

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 35/75 (46%), Positives = 50/75 (66%)
 Frame = -3

Query: 296 HTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVSGPGLARVAH 117
           H H+P+ PEGVI+P K + K+D+    +LWHE  AL GR   +RP+  SVSG  L R+AH
Sbjct: 719 HAHVPRLPEGVIIPKKLVTKRDLTLARVLWHEDSALHGRVTLKRPVPNSVSGAYLGRLAH 778

Query: 116 GLVSKYHTAKRQESM 72
            LV K++  + +ES+
Sbjct: 779 QLVKKFYKHQERESV 793


>gb|ERN12290.1| hypothetical protein AMTR_s00025p00023010 [Amborella trichopoda]
          Length = 770

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 35/75 (46%), Positives = 50/75 (66%)
 Frame = -3

Query: 296 HTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVSGPGLARVAH 117
           H H+P+ PEGVI+P K + K+D+    +LWHE  AL GR   +RP+  SVSG  L R+AH
Sbjct: 302 HAHVPRLPEGVIIPKKLVTKRDLTLARVLWHEDSALHGRVTLKRPVPNSVSGAYLGRLAH 361

Query: 116 GLVSKYHTAKRQESM 72
            LV K++  + +ES+
Sbjct: 362 QLVKKFYKHQERESV 376


>ref|XP_011011031.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X4 [Populus
           euphratica]
          Length = 1233

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = -3

Query: 299 FHTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVSGPGLARVA 120
           FH+HIP+ PEGVI+P KS+ K ++     LWHE  A+ G   ++R I KS+SGP LA +A
Sbjct: 739 FHSHIPRLPEGVILPNKSVTKCNILHAHHLWHEP-AIPGSISSKRQIPKSISGPQLAELA 797

Query: 119 HGLVSKYHTAKR 84
           H LVS+Y ++K+
Sbjct: 798 HRLVSEYSSSKQ 809


>ref|XP_011011030.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X3 [Populus
           euphratica]
          Length = 1233

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = -3

Query: 299 FHTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVSGPGLARVA 120
           FH+HIP+ PEGVI+P KS+ K ++     LWHE  A+ G   ++R I KS+SGP LA +A
Sbjct: 739 FHSHIPRLPEGVILPNKSVTKCNILHAHHLWHEP-AIPGSISSKRQIPKSISGPQLAELA 797

Query: 119 HGLVSKYHTAKR 84
           H LVS+Y ++K+
Sbjct: 798 HRLVSEYSSSKQ 809


>ref|XP_011011029.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X2 [Populus
           euphratica]
          Length = 1383

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = -3

Query: 299 FHTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVSGPGLARVA 120
           FH+HIP+ PEGVI+P KS+ K ++     LWHE  A+ G   ++R I KS+SGP LA +A
Sbjct: 739 FHSHIPRLPEGVILPNKSVTKCNILHAHHLWHEP-AIPGSISSKRQIPKSISGPQLAELA 797

Query: 119 HGLVSKYHTAKR 84
           H LVS+Y ++K+
Sbjct: 798 HRLVSEYSSSKQ 809


>ref|XP_011011028.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X1 [Populus
           euphratica]
          Length = 1402

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = -3

Query: 299 FHTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVSGPGLARVA 120
           FH+HIP+ PEGVI+P KS+ K ++     LWHE  A+ G   ++R I KS+SGP LA +A
Sbjct: 739 FHSHIPRLPEGVILPNKSVTKCNILHAHHLWHEP-AIPGSISSKRQIPKSISGPQLAELA 797

Query: 119 HGLVSKYHTAKR 84
           H LVS+Y ++K+
Sbjct: 798 HRLVSEYSSSKQ 809


>ref|XP_006375953.1| hypothetical protein POPTR_0013s06730g [Populus trichocarpa]
           gi|550325137|gb|ERP53750.1| hypothetical protein
           POPTR_0013s06730g [Populus trichocarpa]
          Length = 825

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 34/71 (47%), Positives = 47/71 (66%)
 Frame = -3

Query: 299 FHTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVSGPGLARVA 120
           FH+HIP+ PEGVI+P KS+ K ++     LWHE         ++R I KS+SGP LA +A
Sbjct: 333 FHSHIPRLPEGVILPNKSVTKCNILHAHHLWHE--PAIPSISSKRQIPKSISGPQLAELA 390

Query: 119 HGLVSKYHTAK 87
           H LVS+Y ++K
Sbjct: 391 HRLVSEYSSSK 401


>ref|XP_006375952.1| hypothetical protein POPTR_0013s06730g [Populus trichocarpa]
           gi|550325136|gb|ERP53749.1| hypothetical protein
           POPTR_0013s06730g [Populus trichocarpa]
          Length = 788

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 34/71 (47%), Positives = 47/71 (66%)
 Frame = -3

Query: 299 FHTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVSGPGLARVA 120
           FH+HIP+ PEGVI+P KS+ K ++     LWHE         ++R I KS+SGP LA +A
Sbjct: 333 FHSHIPRLPEGVILPNKSVTKCNILHAHHLWHE--PAIPSISSKRQIPKSISGPQLAELA 390

Query: 119 HGLVSKYHTAK 87
           H LVS+Y ++K
Sbjct: 391 HRLVSEYSSSK 401


>emb|CBI26575.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = -3

Query: 302 SFHTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVS 144
           SFH HIP+P EGVI+PGK++ K  +  PP+LWHE  A+ GRK++ER  ++  S
Sbjct: 723 SFHPHIPRPLEGVILPGKTVIKPHLLRPPVLWHETSAVCGRKFSERSRKRKRS 775


>ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
          Length = 834

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = -3

Query: 302 SFHTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVS 144
           SFH HIP+P EGVI+PGK++ K  +  PP+LWHE  A+ GRK++ER  ++  S
Sbjct: 742 SFHPHIPRPLEGVILPGKTVIKPHLLRPPVLWHETSAVCGRKFSERSRKRKRS 794


>ref|XP_010277316.1| PREDICTED: 5'-3' exoribonuclease 4 isoform X2 [Nelumbo nucifera]
          Length = 735

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 29/63 (46%), Positives = 40/63 (63%)
 Frame = -3

Query: 296 HTHIPKPPEGVIMPGKSIGKQDVQPPPILWHERLALFGRKYTERPIRKSVSGPGLARVAH 117
           H HIP+PP+GVIMP K +   D++P P+LWHE     GR+     + +++SGP L   AH
Sbjct: 493 HRHIPEPPDGVIMPEKFLKPYDIKPFPVLWHED---NGRRQQRPQVPRAISGPHLGEAAH 549

Query: 116 GLV 108
            LV
Sbjct: 550 RLV 552


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