BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00034672
         (282 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24422.3| unnamed protein product [Vitis vinifera]               73   9e-11
ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containi...    73   9e-11
ref|XP_011010009.1| PREDICTED: pentatricopeptide repeat-containi...    72   2e-10
ref|XP_011010008.1| PREDICTED: pentatricopeptide repeat-containi...    72   2e-10
ref|XP_010092553.1| hypothetical protein L484_001219 [Morus nota...    71   4e-10
ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containi...    70   6e-10
emb|CDP06853.1| unnamed protein product [Coffea canephora]             69   1e-09
ref|XP_010246351.1| PREDICTED: pentatricopeptide repeat-containi...    69   2e-09
ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containi...    68   2e-09
gb|KDO58248.1| hypothetical protein CISIN_1g036263mg, partial [C...    68   3e-09
ref|XP_009374796.1| PREDICTED: pentatricopeptide repeat-containi...    67   4e-09
ref|XP_009371490.1| PREDICTED: pentatricopeptide repeat-containi...    67   4e-09
ref|XP_012089966.1| PREDICTED: pentatricopeptide repeat-containi...    67   5e-09
ref|XP_009626857.1| PREDICTED: pentatricopeptide repeat-containi...    67   7e-09
ref|XP_008376005.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    65   2e-08
ref|XP_009769649.1| PREDICTED: pentatricopeptide repeat-containi...    65   2e-08
ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containi...    64   4e-08
gb|KNA03178.1| hypothetical protein SOVF_211680 [Spinacia oleracea]    64   6e-08
ref|XP_007015694.1| Tetratricopeptide repeat (TPR)-like superfam...    64   6e-08
ref|XP_013600657.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08

>emb|CBI24422.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 39/70 (55%), Positives = 49/70 (70%)
 Frame = -1

Query: 210 QPTFPDPNHNLFLNRNTSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFA 31
           QPTFP   H+       +K+H + R  ++ P IDP VSWTSSIA HCRNG+L EAA EF+
Sbjct: 28  QPTFPSRPHS-------TKYH-LTRSHTHSP-IDPIVSWTSSIALHCRNGQLPEAAAEFS 78

Query: 30  RMRLAGVEPN 1
           RM++AGV PN
Sbjct: 79  RMQIAGVRPN 88


>ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic [Vitis vinifera]
          Length = 518

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 39/70 (55%), Positives = 49/70 (70%)
 Frame = -1

Query: 210 QPTFPDPNHNLFLNRNTSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFA 31
           QPTFP   H+       +K+H + R  ++ P IDP VSWTSSIA HCRNG+L EAA EF+
Sbjct: 28  QPTFPSRPHS-------TKYH-LTRSHTHSP-IDPIVSWTSSIALHCRNGQLPEAAAEFS 78

Query: 30  RMRLAGVEPN 1
           RM++AGV PN
Sbjct: 79  RMQIAGVRPN 88


>ref|XP_011010009.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic isoform X2 [Populus euphratica]
          Length = 529

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 46/58 (79%)
 Frame = -1

Query: 174 LNRNTSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFARMRLAGVEPN 1
           +NR++ K ++ L+Q SNK +IDP VSWTSS++R+CRNG+L +AA  F +MRL  ++PN
Sbjct: 42  INRDSKKPNLSLKQISNKTSIDPVVSWTSSLSRYCRNGQLHQAASHFTQMRLLEIDPN 99


>ref|XP_011010008.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic isoform X1 [Populus euphratica]
          Length = 541

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 46/58 (79%)
 Frame = -1

Query: 174 LNRNTSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFARMRLAGVEPN 1
           +NR++ K ++ L+Q SNK +IDP VSWTSS++R+CRNG+L +AA  F +MRL  ++PN
Sbjct: 54  INRDSKKPNLSLKQISNKTSIDPVVSWTSSLSRYCRNGQLHQAASHFTQMRLLEIDPN 111


>ref|XP_010092553.1| hypothetical protein L484_001219 [Morus notabilis]
           gi|587951969|gb|EXC37761.1| hypothetical protein
           L484_001219 [Morus notabilis]
          Length = 508

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 36/68 (52%), Positives = 45/68 (66%)
 Frame = -1

Query: 204 TFPDPNHNLFLNRNTSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFARM 25
           + P P    F N++   H +     + KP I+P V WTSSIARHC+NGR  EAA EF+RM
Sbjct: 23  SLPSPTQPFFPNQHYPSHKL-----TYKP-IEPVVKWTSSIARHCKNGRFSEAAAEFSRM 76

Query: 24  RLAGVEPN 1
           RL+GVEPN
Sbjct: 77  RLSGVEPN 84


>ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Citrus sinensis]
           gi|641839316|gb|KDO58247.1| hypothetical protein
           CISIN_1g010496mg [Citrus sinensis]
          Length = 509

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
 Frame = -1

Query: 210 QPTFP---DPNHNLFLNRNTSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAR 40
           QP  P   +PN NL     T+   + ++  ++K T++PTV WTSSI+RHCR+GR+ EAA 
Sbjct: 12  QPFLPHQQNPNQNL-----TTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAAL 66

Query: 39  EFARMRLAGVEPN 1
           EF RM L G  PN
Sbjct: 67  EFTRMTLHGTNPN 79


>emb|CDP06853.1| unnamed protein product [Coffea canephora]
          Length = 527

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
 Frame = -1

Query: 204 TFPDPNHNLFLNRNTSKHHVILRQTSNKPTI---DPTVSWTSSIARHCRNGRLVEAAREF 34
           T P P + + +N +  KH    + T NKP     +  VSWTSSIA HC+ GRL  AA EF
Sbjct: 27  TNPPPPNTITVNGSPQKHQPTFKTTQNKPNTPIDELIVSWTSSIAYHCQKGRLSVAASEF 86

Query: 33  ARMRLAGVEPN 1
            RMRL+GVEPN
Sbjct: 87  NRMRLSGVEPN 97


>ref|XP_010246351.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic [Nelumbo nucifera]
          Length = 523

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 36/70 (51%), Positives = 46/70 (65%)
 Frame = -1

Query: 210 QPTFPDPNHNLFLNRNTSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFA 31
           Q   P+PN +  +++   K  V+ R   N   IDP VSWTSSI+R CRNGRL EAA +F 
Sbjct: 30  QSHLPNPNRSQSVDK---KQFVLSR---NDQPIDPIVSWTSSISRRCRNGRLAEAAAQFT 83

Query: 30  RMRLAGVEPN 1
            MR++GVEPN
Sbjct: 84  HMRISGVEPN 93


>ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic [Cucumis sativus]
           gi|700209875|gb|KGN64971.1| hypothetical protein
           Csa_1G169950 [Cucumis sativus]
          Length = 525

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 32/56 (57%), Positives = 40/56 (71%)
 Frame = -1

Query: 168 RNTSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFARMRLAGVEPN 1
           R+ +  H  +    N  ++DP V WTSS+AR+CRNG+L EAA EF RMRLAGVEPN
Sbjct: 36  RSPNSPHRNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPN 91


>gb|KDO58248.1| hypothetical protein CISIN_1g036263mg, partial [Citrus sinensis]
          Length = 305

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 38/71 (53%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = -1

Query: 210 QPTFPDPNHNLFLNRNTSKHHVILRQTSN-KPTIDPTVSWTSSIARHCRNGRLVEAAREF 34
           QP  P   H    N+N  K   I  QT+N K TID TV WTSSI+RHCR+G ++EAA EF
Sbjct: 12  QPFLP---HQQNRNQNLKKRPQISIQTNNSKSTIDTTVQWTSSISRHCRSGCILEAALEF 68

Query: 33  ARMRLAGVEPN 1
            RMRL G  P+
Sbjct: 69  TRMRLYGTNPS 79


>ref|XP_009374796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 521

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -1

Query: 198 PDPNHNLFLNRNT-SKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFARMR 22
           P+P+ +   N N   KH V L +T  K  IDPTVSWTSSI+  CRNG L EA   F +MR
Sbjct: 27  PNPSQSTSPNPNQYRKHSVSLERT--KTPIDPTVSWTSSISHRCRNGHLAEALAHFIQMR 84

Query: 21  LAGVEPN 1
            AGVEPN
Sbjct: 85  RAGVEPN 91


>ref|XP_009371490.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 521

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -1

Query: 198 PDPNHNLFLNRNT-SKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFARMR 22
           P+P+ +   N N   KH V L +T  K  IDPTVSWTSSI+  CRNG L EA   F +MR
Sbjct: 27  PNPSQSTSPNPNQYRKHSVSLERT--KTPIDPTVSWTSSISHRCRNGHLAEALAHFIQMR 84

Query: 21  LAGVEPN 1
            AGVEPN
Sbjct: 85  RAGVEPN 91


>ref|XP_012089966.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic [Jatropha curcas]
          Length = 528

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
 Frame = -1

Query: 210 QPTFPDPNHNLFLNRN---TSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAR 40
           +PT   P+ +   NR+   + K ++ ++Q SNKP ID TV++TSSI+RHCRNG+L EAA 
Sbjct: 27  KPTLAMPHLSQHQNRSQFISCKPNLSVKQQSNKP-IDLTVAFTSSISRHCRNGKLPEAAS 85

Query: 39  EFARMRLAGVEPN 1
           +F +M L GVEPN
Sbjct: 86  QFIQMLLCGVEPN 98


>ref|XP_009626857.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic [Nicotiana tomentosiformis]
          Length = 518

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 32/57 (56%), Positives = 39/57 (68%)
 Frame = -1

Query: 171 NRNTSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFARMRLAGVEPN 1
           +R+ SK  + L+  SN   +D T SWTS IA HCRNGRL+EA  EF RMR+ G EPN
Sbjct: 35  DRSRSKFQLALKNPSNN--LDSTASWTSLIANHCRNGRLIEAVSEFTRMRIYGFEPN 89


>ref|XP_008376005.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05750, chloroplastic-like [Malus domestica]
          Length = 521

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = -1

Query: 198 PDPNHNLFLNRNT-SKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFARMR 22
           P+P+ +   N N   KH V L +T  K  IDPT SWTSSI+  CRNG L EA   F +MR
Sbjct: 27  PNPSQSTSPNPNQYRKHSVSLERT--KTPIDPTFSWTSSISHRCRNGHLAEALAHFIQMR 84

Query: 21  LAGVEPN 1
            AGVEPN
Sbjct: 85  RAGVEPN 91


>ref|XP_009769649.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic [Nicotiana sylvestris]
          Length = 518

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
 Frame = -1

Query: 204 TFPDPNHNLFLNRNT-------SKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEA 46
           T P P    F+++N        SK  + L+  SN   +D T SWTS IA HCRNGRL+EA
Sbjct: 17  TSPHPPLTHFVDKNAATTTYRRSKFQLALKNLSNN--LDSTASWTSLIANHCRNGRLIEA 74

Query: 45  AREFARMRLAGVEPN 1
             EF  MR++G EPN
Sbjct: 75  VSEFTLMRISGFEPN 89


>ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Solanum tuberosum]
          Length = 509

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 31/59 (52%), Positives = 40/59 (67%)
 Frame = -1

Query: 177 FLNRNTSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFARMRLAGVEPN 1
           F N+N++       +++N    D T SWTS IARHC+NGRL+EA  EF RMR +GVEPN
Sbjct: 26  FHNKNSASASAATYRSNN----DSTASWTSLIARHCKNGRLIEAVSEFTRMRNSGVEPN 80


>gb|KNA03178.1| hypothetical protein SOVF_211680 [Spinacia oleracea]
          Length = 517

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 27/55 (49%), Positives = 40/55 (72%)
 Frame = -1

Query: 165 NTSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFARMRLAGVEPN 1
           +T+KH++ L+Q  N+  +DP V WTS+IARHC+NG +  A +EF RMR + + PN
Sbjct: 39  STAKHNISLKQFHNQ--VDPIVPWTSAIARHCKNGNISHAFKEFTRMRFSDIHPN 91


>ref|XP_007015694.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508786057|gb|EOY33313.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 509

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 36/70 (51%), Positives = 42/70 (60%)
 Frame = -1

Query: 210 QPTFPDPNHNLFLNRNTSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFA 31
           QP F +PNH                Q S KP +D  VSWTSSI+RHCR G++ EAA EF 
Sbjct: 27  QPIFSNPNH----------------QISLKP-LDHIVSWTSSISRHCRAGQISEAASEFT 69

Query: 30  RMRLAGVEPN 1
           RMRL+ VEPN
Sbjct: 70  RMRLSEVEPN 79


>ref|XP_013600657.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic [Brassica oleracea var. oleracea]
          Length = 503

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 35/69 (50%), Positives = 42/69 (60%)
 Frame = -1

Query: 207 PTFPDPNHNLFLNRNTSKHHVILRQTSNKPTIDPTVSWTSSIARHCRNGRLVEAAREFAR 28
           P+   P    F++RN   +   L Q  N+ T + TVSWTS I    RNGRL EAA+EF  
Sbjct: 10  PSPAPPQQTPFISRNNHPNPK-LNQKLNQSTSETTVSWTSRITLLSRNGRLAEAAKEFTA 68

Query: 27  MRLAGVEPN 1
           MRLAGVEPN
Sbjct: 69  MRLAGVEPN 77