BLASTX nr result

ID: Cornus23_contig00034643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00034643
         (275 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFE68559.1| LOW QUALITY PROTEIN: conserved hypothetical prote...    58   3e-06

>gb|EFE68559.1| LOW QUALITY PROTEIN: conserved hypothetical protein, partial
           [Streptomyces ghanaensis ATCC 14672]
          Length = 91

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 34/69 (49%), Positives = 37/69 (53%)
 Frame = +1

Query: 1   AFLDSTGSLTHPQPWAPHHASTFTPSGFTYQTVHTLSPGQPSPGMSYLTASLRSLPTT*S 180
           AFLDS GS T PQ  A H  S   P GF Y T +TL+PGQP PG+  L AS    PT   
Sbjct: 14  AFLDSIGSSTSPQS-ARHRVSDDVPGGFAYLTSYTLTPGQPPPGLDCLPASPHHSPTNRL 72

Query: 181 VHTLTHPRS 207
              L H  S
Sbjct: 73  GRRLHHSPS 81


Top