BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00034632
         (413 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009045729.1| orf174 (mitochondrion) [Batis maritima] gi|6...    81   2e-19
ref|XP_010314945.1| PREDICTED: ribosomal protein S4, mitochondri...    79   8e-16
gb|KJB09742.1| hypothetical protein B456_001G161800 [Gossypium r...    86   8e-15
gb|AEN56127.1| ribosomal protein S4 [Cucumis melo subsp. melo]         62   1e-07
ref|YP_009041168.1| ribosomal protein subunit S4 (mitochondrion)...    60   6e-07
gb|ALJ78540.1| ribosomal protein S4, partial (mitochondrion) [Ma...    57   5e-06

>ref|YP_009045729.1| orf174 (mitochondrion) [Batis maritima] gi|655168503|gb|AIC83332.1|
           orf174 (mitochondrion) [Batis maritima]
          Length = 174

 Score = 80.9 bits (198), Expect(2) = 2e-19
 Identities = 40/45 (88%), Positives = 42/45 (93%)
 Frame = +1

Query: 115 CIIVSSLFQTFPDSRRQVLNLNAGKAYLVESVFFATSRITGIEPP 249
           CIIVSSLF+TFP+SRRQVLN NAG  YLVESVFFATSRITGIEPP
Sbjct: 4   CIIVSSLFRTFPESRRQVLNRNAGIFYLVESVFFATSRITGIEPP 48



 Score = 41.6 bits (96), Expect(2) = 2e-19
 Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
 Frame = +2

Query: 245 PLCCWRADGECPTSIQQLL----WLEERPLM*RKWPNII 349
           P CCWRADGEC TSIQQL+    WL   P    K P ++
Sbjct: 47  PPCCWRADGECSTSIQQLVRSRFWL--APFSKSKLPKLL 83


>ref|XP_010314945.1| PREDICTED: ribosomal protein S4, mitochondrial [Solanum
           lycopersicum]
          Length = 450

 Score = 78.6 bits (192), Expect(2) = 8e-16
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = -1

Query: 266 PPASSRGGSIPVIRDVAKKTDSTRYALPALRFKTCRLLSGNVWN 135
           PPA+     +P+IRDVAKKTDSTRYALPALRFKTCRLLSGNVWN
Sbjct: 80  PPAAEAETELPLIRDVAKKTDSTRYALPALRFKTCRLLSGNVWN 123



 Score = 31.6 bits (70), Expect(2) = 8e-16
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = -2

Query: 304 PKKLLDRSRTFSIRPPAAE 248
           PKKLLDRS T  I PPAAE
Sbjct: 66  PKKLLDRSSTLYICPPAAE 84


>gb|KJB09742.1| hypothetical protein B456_001G161800 [Gossypium raimondii]
          Length = 329

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = -1

Query: 278 DILHPPASSRGGSIPVIRDVAKKTDSTRYALPALRFKTCRLLSGNVWN 135
           +ILHPPASSRGGSIPVIRDVAKKT+  RY +PALRFKTCRLLSGNV N
Sbjct: 58  NILHPPASSRGGSIPVIRDVAKKTEKPRYEMPALRFKTCRLLSGNVRN 105


>gb|AEN56127.1| ribosomal protein S4 [Cucumis melo subsp. melo]
          Length = 379

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = -1

Query: 245 GSIPVIRDVAKKTDSTRYALPALRFKTCRLLSGNV 141
           GSIPVIRDVAKK D  RYALPALRF+TCRLL GNV
Sbjct: 13  GSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNV 47


>ref|YP_009041168.1| ribosomal protein subunit S4 (mitochondrion) [Rhazya stricta]
           gi|645929292|gb|AIB08815.1| ribosomal protein subunit S4
           (mitochondrion) [Rhazya stricta]
          Length = 393

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -1

Query: 224 DVAKKTDSTRYALPALRFKTCRLLSGNVW 138
           DVAKKTDSTRY +PALRFKTCRLLSGNVW
Sbjct: 34  DVAKKTDSTRYNVPALRFKTCRLLSGNVW 62


>gb|ALJ78540.1| ribosomal protein S4, partial (mitochondrion) [Malus hupehensis
           var. mengshanensis]
          Length = 359

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -1

Query: 221 VAKKTDSTRYALPALRFKTCRLLSGNVWN 135
           VAKKTDSTRYA+PALRFKTCRLLSGNV N
Sbjct: 1   VAKKTDSTRYAVPALRFKTCRLLSGNVRN 29