BLASTX nr result
ID: Cornus23_contig00034570
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00034570
(550 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containi... 102 1e-19
emb|CBI22850.3| unnamed protein product [Vitis vinifera] 100 3e-19
ref|XP_011010799.1| PREDICTED: pentatricopeptide repeat-containi... 99 1e-18
ref|XP_010267915.1| PREDICTED: pentatricopeptide repeat-containi... 99 1e-18
ref|XP_002314968.2| pentatricopeptide repeat-containing family p... 98 3e-18
ref|XP_008390413.1| PREDICTED: pentatricopeptide repeat-containi... 97 4e-18
ref|XP_009372091.1| PREDICTED: pentatricopeptide repeat-containi... 97 5e-18
ref|XP_007153135.1| hypothetical protein PHAVU_003G009700g [Phas... 97 6e-18
ref|XP_004295051.1| PREDICTED: pentatricopeptide repeat-containi... 97 6e-18
ref|XP_007035867.1| Pentatricopeptide repeat (PPR) superfamily p... 96 8e-18
ref|XP_012453403.1| PREDICTED: pentatricopeptide repeat-containi... 96 1e-17
emb|CDP09291.1| unnamed protein product [Coffea canephora] 96 1e-17
ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containi... 93 9e-17
ref|XP_009769065.1| PREDICTED: pentatricopeptide repeat-containi... 92 1e-16
ref|XP_014520617.1| PREDICTED: pentatricopeptide repeat-containi... 92 2e-16
gb|KHN01581.1| Pentatricopeptide repeat-containing protein [Glyc... 92 2e-16
ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containi... 92 2e-16
ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containi... 92 2e-16
ref|XP_008458325.1| PREDICTED: pentatricopeptide repeat-containi... 91 3e-16
ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containi... 91 3e-16
>ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48810
[Vitis vinifera]
Length = 666
Score = 102 bits (254), Expect = 1e-19
Identities = 53/91 (58%), Positives = 65/91 (71%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGSPPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGTW 367
GKV AIQL+D +S PD+I YTSLI GIC IGVEEA VYL RM +EGI+PN+ TW
Sbjct: 575 GKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATW 634
Query: 366 NVLVRCFFSKKDYMGAMDFLDNSILDSRYDT 274
NVLVR FS + GA+ FLD ++L S ++T
Sbjct: 635 NVLVRHLFSNMGHSGAVQFLD-AVLGSGFET 664
>emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 100 bits (250), Expect = 3e-19
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGSPPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGTW 367
GKV AIQL+D +S PD+I YTSLI GIC IGVEEA VYL RM +EGI+PN+ TW
Sbjct: 575 GKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATW 634
Query: 366 NVLVRCFFSKKDYMGAMDFLD-NSILDSRY 280
NVLVR FS + GA+ FLD +SI+ ++
Sbjct: 635 NVLVRHLFSNMGHSGAVQFLDASSIMQPKF 664
>ref|XP_011010799.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48810
[Populus euphratica]
Length = 662
Score = 99.4 bits (246), Expect = 1e-18
Identities = 46/89 (51%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGSP-PDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGT 370
G+V++AIQLVD +S G PD+ TYTSL++G+C WIGV+EA V+L++M NEGI PN T
Sbjct: 572 GEVKTAIQLVDRLSNKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRAT 631
Query: 369 WNVLVRCFFSKKDYMGAMDFLDNSILDSR 283
WN LVR FSK ++G + +DN + + +
Sbjct: 632 WNALVRGLFSKLGHLGPIHIVDNILANGK 660
>ref|XP_010267915.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48810
[Nelumbo nucifera]
Length = 659
Score = 99.4 bits (246), Expect = 1e-18
Identities = 43/81 (53%), Positives = 62/81 (76%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGSPPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGTW 367
G+V++AIQL+D MS+ G PDL+TY+ LI+G+C+W +EEA V+L +M NEG++PN W
Sbjct: 574 GEVKTAIQLMDRMSSEGCSPDLLTYSFLIYGLCKWFSLEEAMVFLFKMLNEGLSPNAAIW 633
Query: 366 NVLVRCFFSKKDYMGAMDFLD 304
N+LVRCFFSK G++ L+
Sbjct: 634 NILVRCFFSKMGPPGSIQLLN 654
Score = 56.6 bits (135), Expect = 7e-06
Identities = 30/69 (43%), Positives = 42/69 (60%)
Frame = -2
Query: 543 KVESAIQLVDAMSTAGSPPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGTWN 364
K++ A LVD M G P++ITYT++I +CE VE + V L +M G TPNI T+
Sbjct: 260 KIKDAFLLVDEMVNRGIGPNVITYTTIINALCEVGNVELSLVVLAQMLVRGCTPNIHTFT 319
Query: 363 VLVRCFFSK 337
L++ FF K
Sbjct: 320 SLIKGFFQK 328
>ref|XP_002314968.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550329900|gb|EEF01139.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 662
Score = 97.8 bits (242), Expect = 3e-18
Identities = 45/89 (50%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGSP-PDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGT 370
G+V++AIQLVD ++ G PD+ TYTSL++G+C WIGV+EA V+L++M NEGI PN T
Sbjct: 572 GEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRAT 631
Query: 369 WNVLVRCFFSKKDYMGAMDFLDNSILDSR 283
WN LVR FSK ++G + +DN + + +
Sbjct: 632 WNALVRGLFSKLGHLGPIHIVDNILANGK 660
>ref|XP_008390413.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48810
[Malus domestica]
Length = 667
Score = 97.4 bits (241), Expect = 4e-18
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGS-PPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGT 370
G + +AIQL D + PD++ YTSL++GIC W+G++EA +YLN+M +EGI PN GT
Sbjct: 580 GTISTAIQLFDRIGAEKZWRPDVVAYTSLVWGICNWVGLDEAMIYLNKMVSEGICPNTGT 639
Query: 369 WNVLVRCFFSKKDYMGAMDFLDNSI 295
WN LVRCFFS ++G + LD+ +
Sbjct: 640 WNXLVRCFFSSLGHLGPIYMLDBIV 664
>ref|XP_009372091.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48810
[Pyrus x bretschneideri]
Length = 667
Score = 97.1 bits (240), Expect = 5e-18
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGS-PPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGT 370
G + +AIQL D + PD++ YTSL++GIC W+G++EA +YLN+M +EGI PN GT
Sbjct: 580 GTISTAIQLFDRIGAEKEWQPDVVAYTSLVWGICNWVGLDEAMIYLNKMVSEGICPNTGT 639
Query: 369 WNVLVRCFFSKKDYMGAMDFLDNSI 295
WN LVRCFFS ++G + LD+ +
Sbjct: 640 WNALVRCFFSSLGHLGPIYMLDDIV 664
>ref|XP_007153135.1| hypothetical protein PHAVU_003G009700g [Phaseolus vulgaris]
gi|561026489|gb|ESW25129.1| hypothetical protein
PHAVU_003G009700g [Phaseolus vulgaris]
Length = 662
Score = 96.7 bits (239), Expect = 6e-18
Identities = 48/84 (57%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGSP--PDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIG 373
GKV +AIQL+D + TAG D+I +TSL++GIC W+G+EEA VYLN+M N GI+PNI
Sbjct: 575 GKVRTAIQLLDRI-TAGKEFCSDIIAHTSLLWGICNWLGIEEAVVYLNKMINRGISPNIV 633
Query: 372 TWNVLVRCFFSKKDYMGAMDFLDN 301
TWNVLVR FF+K ++G + LD+
Sbjct: 634 TWNVLVRGFFNKLGHIGPIRILDD 657
>ref|XP_004295051.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48810
[Fragaria vesca subsp. vesca]
Length = 666
Score = 96.7 bits (239), Expect = 6e-18
Identities = 47/87 (54%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGS-PPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGT 370
G++ESAIQL ++ A PD+ITYTSL++GIC IG++EA VYL++M +EGI PN GT
Sbjct: 579 GRIESAIQLFNSTGAAKEWCPDVITYTSLLWGICSSIGLDEAMVYLHKMISEGICPNFGT 638
Query: 369 WNVLVRCFFSKKDYMGAMDFLDNSILD 289
WNVLV+CFFS ++G + LD + D
Sbjct: 639 WNVLVQCFFSSLGHLGPIYILDEILHD 665
>ref|XP_007035867.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao] gi|508714896|gb|EOY06793.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative [Theobroma cacao]
Length = 664
Score = 96.3 bits (238), Expect = 8e-18
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGS-PPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGT 370
GKV+ A+QL D +S G PD+I+YTSL++G+C WIG+EE LN+M NEGI PN+ T
Sbjct: 577 GKVKIAVQLFDRISAGGDWHPDIISYTSLLWGLCNWIGLEEGISLLNKMINEGICPNVAT 636
Query: 369 WNVLVRCFFSKKDYMGAMDFLDN 301
WNVLV+C F+ ++G + LD+
Sbjct: 637 WNVLVQCLFNSLGHLGPIHILDD 659
>ref|XP_012453403.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48810
[Gossypium raimondii] gi|763745250|gb|KJB12689.1|
hypothetical protein B456_002G031400 [Gossypium
raimondii]
Length = 664
Score = 95.9 bits (237), Expect = 1e-17
Identities = 39/83 (46%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGS-PPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGT 370
GKV++A++++D + +G PD+++YTSLI+G+C W+G+EEA YLN+M NEGI PN+ T
Sbjct: 577 GKVKTAVRILDCVRASGDWHPDVVSYTSLIWGLCNWVGIEEAICYLNKMINEGICPNVAT 636
Query: 369 WNVLVRCFFSKKDYMGAMDFLDN 301
W+V V+C F+ ++G + LD+
Sbjct: 637 WHVFVQCLFNSLGHLGPIRVLDD 659
>emb|CDP09291.1| unnamed protein product [Coffea canephora]
Length = 675
Score = 95.9 bits (237), Expect = 1e-17
Identities = 48/90 (53%), Positives = 63/90 (70%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGSPPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGTW 367
GKVESAI+L+D MS+ G PDL+T+TSLI GICE IG++ A+VYL RM +GI PNI W
Sbjct: 577 GKVESAIKLLDTMSSVGCNPDLVTFTSLICGICETIGLDLASVYLQRMIEKGICPNISIW 636
Query: 366 NVLVRCFFSKKDYMGAMDFLDNSILDSRYD 277
N LVR F K Y ++ N+++D R +
Sbjct: 637 NFLVRWLFRKLGYDASLTHF-NNVMDGRLE 665
>ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48810
[Solanum lycopersicum] gi|723657102|ref|XP_010319195.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g48810 [Solanum lycopersicum]
gi|723657105|ref|XP_010319198.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g48810
[Solanum lycopersicum] gi|723657108|ref|XP_010319200.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g48810 [Solanum lycopersicum]
gi|723657111|ref|XP_010319207.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g48810
[Solanum lycopersicum]
Length = 663
Score = 92.8 bits (229), Expect = 9e-17
Identities = 45/82 (54%), Positives = 57/82 (69%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGSPPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGTW 367
GKVESA QL++AMS G P I+YT LI G+C W+G+E A L +M N+GI P I TW
Sbjct: 577 GKVESAKQLLNAMSQVGLRPGFISYTCLIDGLCSWVGLEAAICCLQKMINDGIPPKISTW 636
Query: 366 NVLVRCFFSKKDYMGAMDFLDN 301
NVLVR FSK Y A+++LD+
Sbjct: 637 NVLVRHLFSKIGYGSALEYLDS 658
>ref|XP_009769065.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48810
[Nicotiana sylvestris] gi|698550702|ref|XP_009769066.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g48810 [Nicotiana sylvestris]
gi|698550705|ref|XP_009769067.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g48810
[Nicotiana sylvestris] gi|698550708|ref|XP_009769068.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g48810 [Nicotiana sylvestris]
Length = 655
Score = 92.4 bits (228), Expect = 1e-16
Identities = 46/82 (56%), Positives = 56/82 (68%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGSPPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGTW 367
GKVES QL++AMS G PD I+YT LI G+C WIG+E A L RM N+GI P I TW
Sbjct: 569 GKVESGKQLLNAMSPVGLRPDFISYTCLIDGLCSWIGLEAAIGCLQRMINDGIPPKISTW 628
Query: 366 NVLVRCFFSKKDYMGAMDFLDN 301
NVLVR FSK Y A++ L++
Sbjct: 629 NVLVRHLFSKMGYGSALEHLES 650
>ref|XP_014520617.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48810
[Vigna radiata var. radiata]
Length = 662
Score = 92.0 bits (227), Expect = 2e-16
Identities = 44/83 (53%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGSP-PDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGT 370
GKV++AIQ++D M+ D+I +TS+++GIC W+ +EEA VYLN+M N GI PNI T
Sbjct: 575 GKVKTAIQVLDKMTAEKELCSDIIAHTSVLWGICNWLSIEEAVVYLNKMLNSGIFPNIVT 634
Query: 369 WNVLVRCFFSKKDYMGAMDFLDN 301
WNVLVR FF+K +MG + LD+
Sbjct: 635 WNVLVRGFFNKLGHMGPIRILDD 657
>gb|KHN01581.1| Pentatricopeptide repeat-containing protein [Glycine soja]
Length = 489
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/84 (55%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGSP--PDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIG 373
GKV +AIQ +D + TAG PD+I +TSL++GIC +G+EEA VYLN+M N+GI PNI
Sbjct: 402 GKVRTAIQFLDRI-TAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIA 460
Query: 372 TWNVLVRCFFSKKDYMGAMDFLDN 301
TW+VLVR FF K +MG + LD+
Sbjct: 461 TWDVLVRGFFKKLGHMGPIRILDD 484
>ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max] gi|947101021|gb|KRH49513.1|
hypothetical protein GLYMA_07G160400 [Glycine max]
Length = 664
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/84 (55%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGSP--PDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIG 373
GKV +AIQ +D + TAG PD+I +TSL++GIC +G+EEA VYLN+M N+GI PNI
Sbjct: 577 GKVRTAIQFLDRI-TAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIA 635
Query: 372 TWNVLVRCFFSKKDYMGAMDFLDN 301
TW+VLVR FF K +MG + LD+
Sbjct: 636 TWDVLVRGFFKKLGHMGPIRILDD 659
>ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Solanum tuberosum]
Length = 663
Score = 91.7 bits (226), Expect = 2e-16
Identities = 48/85 (56%), Positives = 59/85 (69%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGSPPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGTW 367
GKVESA QL++AMS G P I+YT LI G+C W+G+E A L +M N+GI P I TW
Sbjct: 577 GKVESAKQLLNAMSQVGLRPGFISYTCLIDGLCSWVGLEAAICCLQKMINDGIPPMISTW 636
Query: 366 NVLVRCFFSKKDYMGAMDFLDNSIL 292
NVLVR FSK Y A+++L NSIL
Sbjct: 637 NVLVRHLFSKIGYGSALEYL-NSIL 660
>ref|XP_008458325.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48810
[Cucumis melo] gi|659116913|ref|XP_008458326.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g48810 [Cucumis melo]
gi|659116915|ref|XP_008458327.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g48810
[Cucumis melo]
Length = 660
Score = 90.9 bits (224), Expect = 3e-16
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGS-PPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGT 370
GKV+ A QLV+ +S+ PD+ITYT LI+G C+WI +EEA +L++ N+GI PN T
Sbjct: 573 GKVKIAAQLVERVSSMKEWQPDIITYTGLIWGACKWINIEEAIAFLDKAINQGICPNFAT 632
Query: 369 WNVLVRCFFSKKDYMGAMDFLDN 301
WN L+RCFF +MG + LD+
Sbjct: 633 WNALIRCFFDSLGHMGPIHILDD 655
>ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48810
[Cucumis sativus] gi|700192241|gb|KGN47445.1|
hypothetical protein Csa_6G324890 [Cucumis sativus]
Length = 660
Score = 90.9 bits (224), Expect = 3e-16
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = -2
Query: 546 GKVESAIQLVDAMSTAGS-PPDLITYTSLIFGICEWIGVEEAAVYLNRMSNEGITPNIGT 370
GKV+ A QLV+ +S+ PD+ITYTSLI+G C W+ +EEA +L++ N+GI PN T
Sbjct: 573 GKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFAT 632
Query: 369 WNVLVRCFFSKKDYMGAMDFLDN 301
WN LVRCFF +MG + LD+
Sbjct: 633 WNALVRCFFDSLGHMGPIHILDD 655