BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00034215
         (338 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004367288.1| RNA-binding region RNP-1 domain-containing p...    75   1e-11
ref|XP_003284738.1| RNA-binding region-containing protein (RNP-1...    75   3e-11
gb|EFA86376.1| RNA-binding region RNP-1 domain-containing protei...    74   3e-11
dbj|GAO48929.1| hypothetical protein G7K_3091-t1 [Saitoella comp...    71   4e-10
ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xen...    69   1e-09
ref|XP_629007.1| RNA-binding region RNP-1 domain-containing prot...    69   2e-09
ref|XP_009580909.1| PREDICTED: polyadenylate-binding protein 1 [...    68   2e-09
gb|KFV94514.1| Polyadenylate-binding protein 1, partial [Fulmaru...    68   2e-09
emb|CEP03425.1| hypothetical protein PBRA_003185 [Plasmodiophora...    68   3e-09
ref|XP_013871887.1| PREDICTED: embryonic polyadenylate-binding p...    66   9e-09
ref|XP_013871865.1| PREDICTED: embryonic polyadenylate-binding p...    66   9e-09
ref|XP_005844200.1| hypothetical protein CHLNCDRAFT_59028 [Chlor...    66   9e-09
gb|KQK82063.1| Polyadenylate-binding protein 1 [Amazona aestiva]       66   1e-08
ref|XP_014140642.1| PREDICTED: polyadenylate-binding protein 1 i...    66   1e-08
ref|XP_014140641.1| PREDICTED: polyadenylate-binding protein 1 i...    66   1e-08
ref|XP_013797409.1| PREDICTED: polyadenylate-binding protein 1 i...    66   1e-08
ref|XP_013161090.1| PREDICTED: polyadenylate-binding protein 1 i...    66   1e-08
ref|XP_013161087.1| PREDICTED: polyadenylate-binding protein 1 i...    66   1e-08
ref|XP_013035450.1| PREDICTED: polyadenylate-binding protein 1 i...    66   1e-08
ref|XP_012961887.1| PREDICTED: polyadenylate-binding protein 1 [...    66   1e-08

>ref|XP_004367288.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
           fasciculatum] gi|328871935|gb|EGG20305.1| RNA-binding
           region RNP-1 domain-containing protein [Dictyostelium
           fasciculatum]
          Length = 567

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 37/74 (50%), Positives = 51/74 (68%)
 Frame = -3

Query: 327 PELTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNE 148
           P++TL+ +  +P EQQ   LGELLYPL+   +P+  GKITGM LDS  T++ELF L    
Sbjct: 491 PQITLEYVEALPREQQNPFLGELLYPLIHASQPDAAGKITGMLLDS-LTVQELFELAQRA 549

Query: 147 SKLNEKVEQAVSVL 106
            KL EK+++A+ VL
Sbjct: 550 DKLGEKIKEALEVL 563


>ref|XP_003284738.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
           purpureum] gi|325085338|gb|EGC38747.1| RNA-binding
           region-containing protein (RNP-1) [Dictyostelium
           purpureum]
          Length = 565

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
 Frame = -3

Query: 318 TLQQLLTIP-EEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNESK 142
           TL  +L +P  +QQ VALGELLYPL+   +P L GKITGM LDS   +EELF+L      
Sbjct: 492 TLSSILALPTRDQQNVALGELLYPLIHNSQPELAGKITGMLLDS-LPVEELFALTQRSDL 550

Query: 141 LNEKVEQAVSVL 106
           LNEK+++A+ VL
Sbjct: 551 LNEKIKEAIDVL 562


>gb|EFA86376.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
           pallidum PN500]
          Length = 562

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 38/76 (50%), Positives = 53/76 (69%)
 Frame = -3

Query: 333 ILPELTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLH 154
           + PE+TL  + ++P EQQ   LGELLYPL+   +P+L GKITGM LDS  T+EELF+L  
Sbjct: 477 VQPEVTLATVQSMPREQQNSFLGELLYPLIHASQPDLSGKITGMLLDS-LTVEELFTLYQ 535

Query: 153 NESKLNEKVEQAVSVL 106
               L +K+++A+ VL
Sbjct: 536 RTELLADKIKEALDVL 551


>dbj|GAO48929.1| hypothetical protein G7K_3091-t1 [Saitoella complicata NRRL
           Y-17804]
          Length = 646

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
 Frame = -3

Query: 327 PELTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNE 148
           P++T + L  +P EQQK  LGE +YP +   +P L GKITGM LD    I EL SL+ ++
Sbjct: 548 PKITEESLAGLPIEQQKQVLGEAMYPKIAAQQPELAGKITGMLLD--MEIPELVSLVDDD 605

Query: 147 SKLNEKVEQAVSVLQRVQ-PPDQLEAGA 67
           ++LN KVE+A++VL+  Q   D  EA A
Sbjct: 606 AQLNAKVEEALTVLKEYQAQQDPTEAPA 633


>ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
           tropicalis] gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName:
           Full=Embryonic polyadenylate-binding protein;
           Short=Embryonic poly(A)-binding protein; Short=ePABP
           gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus
           (Silurana) tropicalis]
          Length = 629

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 38/87 (43%), Positives = 52/87 (59%)
 Frame = -3

Query: 321 LTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNESK 142
           LT   L + P ++QK  LGE LYPL+ ++ P L GKITGM L+      EL  +L +   
Sbjct: 542 LTASSLASAPPQEQKQMLGERLYPLIHEMHPTLAGKITGMLLEI--DNSELLHMLESPES 599

Query: 141 LNEKVEQAVSVLQRVQPPDQLEAGAQQ 61
           L+ KVE+AV+VLQ  Q  +  +  AQQ
Sbjct: 600 LHSKVEEAVAVLQAHQAKENSQKSAQQ 626


>ref|XP_629007.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
           discoideum AX4] gi|74996426|sp|Q54BM2.1|PAP1A_DICDI
           RecName: Full=Polyadenylate-binding protein 1-A;
           Short=PABP-1-A; Short=Poly(A)-binding protein,
           cytoplasmic 1-A gi|60462370|gb|EAL60591.1| RNA-binding
           region RNP-1 domain-containing protein [Dictyostelium
           discoideum AX4]
          Length = 565

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = -3

Query: 321 LTLQQLLTIPE-EQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNES 145
           L LQ ++ +P  +QQ VALGE LYPL+   +P+L GKITGM LDS   +EELF+L   + 
Sbjct: 491 LNLQSIINLPSRDQQNVALGEHLYPLIHNSQPDLAGKITGMLLDS-LPVEELFTLTQRQD 549

Query: 144 KLNEKVEQAVSVL 106
            L +K+ +A+ VL
Sbjct: 550 LLADKIREALEVL 562


>ref|XP_009580909.1| PREDICTED: polyadenylate-binding protein 1 [Fulmarus glacialis]
          Length = 566

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 36/89 (40%), Positives = 51/89 (57%)
 Frame = -3

Query: 321 LTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNESK 142
           LT   L + P ++QK  LGE L+PL++ + P L GKITGM L+      EL  +L +   
Sbjct: 475 LTASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEI--DNSELLHMLESPES 532

Query: 141 LNEKVEQAVSVLQRVQPPDQLEAGAQQPT 55
           L  KV++AV+VLQ  Q  +  + G   PT
Sbjct: 533 LRSKVDEAVAVLQAHQAKEAAQKGVNNPT 561


>gb|KFV94514.1| Polyadenylate-binding protein 1, partial [Fulmarus glacialis]
          Length = 573

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 36/89 (40%), Positives = 51/89 (57%)
 Frame = -3

Query: 321 LTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNESK 142
           LT   L + P ++QK  LGE L+PL++ + P L GKITGM L+      EL  +L +   
Sbjct: 482 LTASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEI--DNSELLHMLESPES 539

Query: 141 LNEKVEQAVSVLQRVQPPDQLEAGAQQPT 55
           L  KV++AV+VLQ  Q  +  + G   PT
Sbjct: 540 LRSKVDEAVAVLQAHQAKEAAQKGVNNPT 568


>emb|CEP03425.1| hypothetical protein PBRA_003185 [Plasmodiophora brassicae]
          Length = 571

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 8/101 (7%)
 Frame = -3

Query: 336 PILPELTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFL--DSGWTIEELFS 163
           P    LT+Q L + P EQQK  +GE L+PL+++ +P L GKITGM L  D+G    EL +
Sbjct: 472 PAQQPLTVQMLASAPVEQQKQMIGERLFPLIQQQQPQLAGKITGMLLEMDNG----ELLN 527

Query: 162 LLHNESKLNEKVEQAVSVL------QRVQPPDQLEAGAQQP 58
           LL +   L  K+++A+ VL      Q+ Q  +  EA A++P
Sbjct: 528 LLESHDALTSKIDEALQVLEAHQLRQQQQTLESAEATAEEP 568


>ref|XP_013871887.1| PREDICTED: embryonic polyadenylate-binding protein B-like isoform
           X2 [Austrofundulus limnaeus]
          Length = 626

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 37/81 (45%), Positives = 46/81 (56%)
 Frame = -3

Query: 336 PILPELTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLL 157
           P+   LT   L   P   QK  LGE LYPL+  + PNL GKITGM L+      EL  +L
Sbjct: 540 PVPEPLTASMLAAAPLMDQKQLLGERLYPLIHALHPNLAGKITGMLLEI--DNSELLHML 597

Query: 156 HNESKLNEKVEQAVSVLQRVQ 94
            +   LN KVE+A++VLQ  Q
Sbjct: 598 ESPESLNSKVEEAIAVLQAHQ 618


>ref|XP_013871865.1| PREDICTED: embryonic polyadenylate-binding protein B-like isoform
           X1 [Austrofundulus limnaeus]
           gi|928012826|ref|XP_013871871.1| PREDICTED: embryonic
           polyadenylate-binding protein B-like isoform X1
           [Austrofundulus limnaeus]
           gi|928012828|ref|XP_013871878.1| PREDICTED: embryonic
           polyadenylate-binding protein B-like isoform X1
           [Austrofundulus limnaeus]
          Length = 659

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 37/81 (45%), Positives = 46/81 (56%)
 Frame = -3

Query: 336 PILPELTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLL 157
           P+   LT   L   P   QK  LGE LYPL+  + PNL GKITGM L+      EL  +L
Sbjct: 573 PVPEPLTASMLAAAPLMDQKQLLGERLYPLIHALHPNLAGKITGMLLEI--DNSELLHML 630

Query: 156 HNESKLNEKVEQAVSVLQRVQ 94
            +   LN KVE+A++VLQ  Q
Sbjct: 631 ESPESLNSKVEEAIAVLQAHQ 651


>ref|XP_005844200.1| hypothetical protein CHLNCDRAFT_59028 [Chlorella variabilis]
           gi|307103841|gb|EFN52098.1| hypothetical protein
           CHLNCDRAFT_59028 [Chlorella variabilis]
          Length = 634

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 37/75 (49%), Positives = 49/75 (65%)
 Frame = -3

Query: 324 ELTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNES 145
           +LT   L   P EQQK  LGE L+PLV  ++P+L GKITGM L+      EL  LL + +
Sbjct: 543 QLTAAMLAAAPAEQQKQLLGERLFPLVANVQPDLAGKITGMLLE--MDNSELLLLLEDPT 600

Query: 144 KLNEKVEQAVSVLQR 100
            L+ KVE+AVSVL++
Sbjct: 601 ALDAKVEEAVSVLKQ 615


>gb|KQK82063.1| Polyadenylate-binding protein 1 [Amazona aestiva]
          Length = 647

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 50/89 (56%)
 Frame = -3

Query: 321 LTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNESK 142
           LT   L + P ++QK  LGE L+PL++ + P L GKITGM L+      EL  +L +   
Sbjct: 556 LTASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEI--DNSELLHMLESPES 613

Query: 141 LNEKVEQAVSVLQRVQPPDQLEAGAQQPT 55
           L  KV++AV+VLQ  Q  +  +     PT
Sbjct: 614 LRSKVDEAVAVLQAHQAKEAAQKAVNNPT 642


>ref|XP_014140642.1| PREDICTED: polyadenylate-binding protein 1 isoform X2 [Falco
           cherrug]
          Length = 598

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 50/89 (56%)
 Frame = -3

Query: 321 LTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNESK 142
           LT   L + P ++QK  LGE L+PL++ + P L GKITGM L+      EL  +L +   
Sbjct: 429 LTASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEI--DNSELLHMLESPES 486

Query: 141 LNEKVEQAVSVLQRVQPPDQLEAGAQQPT 55
           L  KV++AV+VLQ  Q  +  +     PT
Sbjct: 487 LRSKVDEAVAVLQAHQAKEAAQKAVNNPT 515


>ref|XP_014140641.1| PREDICTED: polyadenylate-binding protein 1 isoform X1 [Falco
           cherrug]
          Length = 644

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 50/89 (56%)
 Frame = -3

Query: 321 LTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNESK 142
           LT   L + P ++QK  LGE L+PL++ + P L GKITGM L+      EL  +L +   
Sbjct: 475 LTASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEI--DNSELLHMLESPES 532

Query: 141 LNEKVEQAVSVLQRVQPPDQLEAGAQQPT 55
           L  KV++AV+VLQ  Q  +  +     PT
Sbjct: 533 LRSKVDEAVAVLQAHQAKEAAQKAVNNPT 561


>ref|XP_013797409.1| PREDICTED: polyadenylate-binding protein 1 isoform X2 [Apteryx
           australis mantelli]
          Length = 562

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 50/89 (56%)
 Frame = -3

Query: 321 LTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNESK 142
           LT   L + P ++QK  LGE L+PL++ + P L GKITGM L+      EL  +L +   
Sbjct: 471 LTASMLASAPPQEQKQMLGERLFPLIQNMHPTLAGKITGMLLEI--DNSELLHMLESPES 528

Query: 141 LNEKVEQAVSVLQRVQPPDQLEAGAQQPT 55
           L  KV++AV+VLQ  Q  +  +     PT
Sbjct: 529 LRSKVDEAVAVLQAHQAKEAAQKAVNNPT 557


>ref|XP_013161090.1| PREDICTED: polyadenylate-binding protein 1 isoform X4 [Falco
           peregrinus]
          Length = 553

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 50/89 (56%)
 Frame = -3

Query: 321 LTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNESK 142
           LT   L + P ++QK  LGE L+PL++ + P L GKITGM L+      EL  +L +   
Sbjct: 429 LTASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEI--DNSELLHMLESPES 486

Query: 141 LNEKVEQAVSVLQRVQPPDQLEAGAQQPT 55
           L  KV++AV+VLQ  Q  +  +     PT
Sbjct: 487 LRSKVDEAVAVLQAHQAKEAAQKAVNNPT 515


>ref|XP_013161087.1| PREDICTED: polyadenylate-binding protein 1 isoform X1 [Falco
           peregrinus]
          Length = 599

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 50/89 (56%)
 Frame = -3

Query: 321 LTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNESK 142
           LT   L + P ++QK  LGE L+PL++ + P L GKITGM L+      EL  +L +   
Sbjct: 475 LTASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEI--DNSELLHMLESPES 532

Query: 141 LNEKVEQAVSVLQRVQPPDQLEAGAQQPT 55
           L  KV++AV+VLQ  Q  +  +     PT
Sbjct: 533 LRSKVDEAVAVLQAHQAKEAAQKAVNNPT 561


>ref|XP_013035450.1| PREDICTED: polyadenylate-binding protein 1 isoform X2 [Anser
           cygnoides domesticus] gi|930237022|ref|XP_014163474.1|
           PREDICTED: polyadenylate-binding protein 1 isoform X2
           [Geospiza fortis]
          Length = 563

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 50/89 (56%)
 Frame = -3

Query: 321 LTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNESK 142
           LT   L + P ++QK  LGE L+PL++ + P L GKITGM L+      EL  +L +   
Sbjct: 472 LTASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEI--DNSELLHMLESPES 529

Query: 141 LNEKVEQAVSVLQRVQPPDQLEAGAQQPT 55
           L  KV++AV+VLQ  Q  +  +     PT
Sbjct: 530 LRSKVDEAVAVLQAHQAKEAAQKAVNNPT 558


>ref|XP_012961887.1| PREDICTED: polyadenylate-binding protein 1 [Anas platyrhynchos]
          Length = 563

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 50/89 (56%)
 Frame = -3

Query: 321 LTLQQLLTIPEEQQKVALGELLYPLVEKIRPNLCGKITGMFLDSGWTIEELFSLLHNESK 142
           LT   L + P ++QK  LGE L+PL++ + P L GKITGM L+      EL  +L +   
Sbjct: 472 LTASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEI--DNSELLHMLESPES 529

Query: 141 LNEKVEQAVSVLQRVQPPDQLEAGAQQPT 55
           L  KV++AV+VLQ  Q  +  +     PT
Sbjct: 530 LRSKVDEAVAVLQAHQAKEAAQKAVNNPT 558