BLASTX nr result

ID: Cornus23_contig00034121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00034121
         (321 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007018099.1| Glutamate receptor 3.3 isoform 6 [Theobroma ...    57   5e-06
ref|XP_007018097.1| Glutamate receptor 3.3 isoform 4 [Theobroma ...    57   5e-06
ref|XP_007018096.1| Glutamate receptor 3.3 isoform 3 [Theobroma ...    57   5e-06
ref|XP_007018094.1| Glutamate receptor 3.3 isoform 1 [Theobroma ...    57   5e-06
ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinu...    57   7e-06

>ref|XP_007018099.1| Glutamate receptor 3.3 isoform 6 [Theobroma cacao]
           gi|508723427|gb|EOY15324.1| Glutamate receptor 3.3
           isoform 6 [Theobroma cacao]
          Length = 870

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = -2

Query: 317 LQTLLSLMDEKENHSKRENKRRKLDILSPDNDNESEFGRSPKRKAQISTDSKLNSSH 147
           LQ  LSLMDEKE+ SK   KRRK++    DND + E GR PKR+    T S +NS +
Sbjct: 814 LQRFLSLMDEKEDQSKSGQKRRKIEKSLSDNDRDDELGRKPKRRETEMTRSDVNSGN 870


>ref|XP_007018097.1| Glutamate receptor 3.3 isoform 4 [Theobroma cacao]
           gi|590595587|ref|XP_007018098.1| Glutamate receptor 3.3
           isoform 4 [Theobroma cacao] gi|508723425|gb|EOY15322.1|
           Glutamate receptor 3.3 isoform 4 [Theobroma cacao]
           gi|508723426|gb|EOY15323.1| Glutamate receptor 3.3
           isoform 4 [Theobroma cacao]
          Length = 843

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = -2

Query: 317 LQTLLSLMDEKENHSKRENKRRKLDILSPDNDNESEFGRSPKRKAQISTDSKLNSSH 147
           LQ  LSLMDEKE+ SK   KRRK++    DND + E GR PKR+    T S +NS +
Sbjct: 787 LQRFLSLMDEKEDQSKSGQKRRKIEKSLSDNDRDDELGRKPKRRETEMTRSDVNSGN 843


>ref|XP_007018096.1| Glutamate receptor 3.3 isoform 3 [Theobroma cacao]
            gi|508723424|gb|EOY15321.1| Glutamate receptor 3.3
            isoform 3 [Theobroma cacao]
          Length = 941

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = -2

Query: 317  LQTLLSLMDEKENHSKRENKRRKLDILSPDNDNESEFGRSPKRKAQISTDSKLNSSH 147
            LQ  LSLMDEKE+ SK   KRRK++    DND + E GR PKR+    T S +NS +
Sbjct: 885  LQRFLSLMDEKEDQSKSGQKRRKIEKSLSDNDRDDELGRKPKRRETEMTRSDVNSGN 941


>ref|XP_007018094.1| Glutamate receptor 3.3 isoform 1 [Theobroma cacao]
            gi|590595576|ref|XP_007018095.1| Glutamate receptor 3.3
            isoform 1 [Theobroma cacao] gi|508723422|gb|EOY15319.1|
            Glutamate receptor 3.3 isoform 1 [Theobroma cacao]
            gi|508723423|gb|EOY15320.1| Glutamate receptor 3.3
            isoform 1 [Theobroma cacao]
          Length = 933

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = -2

Query: 317  LQTLLSLMDEKENHSKRENKRRKLDILSPDNDNESEFGRSPKRKAQISTDSKLNSSH 147
            LQ  LSLMDEKE+ SK   KRRK++    DND + E GR PKR+    T S +NS +
Sbjct: 877  LQRFLSLMDEKEDQSKSGQKRRKIEKSLSDNDRDDELGRKPKRRETEMTRSDVNSGN 933


>ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223551404|gb|EEF52890.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 927

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 27/49 (55%), Positives = 37/49 (75%)
 Frame = -2

Query: 320  RLQTLLSLMDEKENHSKRENKRRKLDILSPDNDNESEFGRSPKRKAQIS 174
            RL  LLSLMDEKE+ SK +NKRRKL++   +ND ++E GR+ K+K  I+
Sbjct: 877  RLHRLLSLMDEKEDPSKSKNKRRKLEMSLSENDRDAELGRNSKKKVTIA 925


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