BLASTX nr result
ID: Cornus23_contig00034043
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00034043
(382 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005645058.1| light harvesting complex protein I-20 [Cocco... 79 2e-12
ref|XP_002958611.1| light-harvesting protein of photosystem I [V... 79 2e-12
gb|AAD03734.1| light harvesting complex I protein precursor [Chl... 78 3e-12
emb|CAA46235.1| light harvesting complex protein I-20 [Chlamydom... 78 3e-12
ref|XP_013901123.1| light-harvesting protein of photosystem I [M... 77 5e-12
ref|XP_011399967.1| Chlorophyll a-b binding protein 4, chloropla... 77 5e-12
gb|ABD37908.1| light-harvesting chlorophyll-a/b binding protein ... 77 6e-12
ref|XP_001696202.1| light-harvesting protein of photosystem I [C... 74 3e-11
ref|XP_005847168.1| hypothetical protein CHLNCDRAFT_35848 [Chlor... 74 3e-11
ref|XP_011397428.1| Chlorophyll a-b binding protein 6, chloropla... 74 5e-11
gb|ABD37906.1| light-harvesting chlorophyll-a/b binding protein ... 73 7e-11
ref|XP_002945875.1| light harvesting complex a protein [Volvox c... 72 1e-10
ref|XP_005849804.1| hypothetical protein CHLNCDRAFT_59626 [Chlor... 72 1e-10
ref|XP_002957416.1| light-harvesting protein of photosystem I [V... 71 4e-10
gb|AAO16495.1| light-harvesting complex I protein [Chlamydomonas... 70 5e-10
gb|ABA01130.1| chloroplast light harvesting complex I protein [C... 70 6e-10
dbj|BAD06924.1| light-harvesting chlorophyll-a/b protein of phot... 69 2e-09
ref|XP_005850709.1| hypothetical protein CHLNCDRAFT_50418 [Chlor... 68 3e-09
gb|ACN94453.1| photosystem I light-harvesting cholrophyll-a/b pr... 67 5e-09
ref|XP_011397856.1| Chlorophyll a-b binding protein 4, chloropla... 66 1e-08
>ref|XP_005645058.1| light harvesting complex protein I-20 [Coccomyxa subellipsoidea
C-169] gi|384247026|gb|EIE20514.1| light harvesting
complex protein I-20 [Coccomyxa subellipsoidea C-169]
Length = 229
Score = 78.6 bits (192), Expect = 2e-12
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = -2
Query: 381 VKELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLP 226
+KELKNGRLAMLAF+GF+AQ A T + PL+AL H+ADPW NFATNG S+P
Sbjct: 175 LKELKNGRLAMLAFVGFIAQHAATGKGPLEALKLHLADPWGANFATNGVSIP 226
>ref|XP_002958611.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis] gi|300256072|gb|EFJ40348.1|
light-harvesting protein of photosystem I [Volvox
carteri f. nagariensis]
Length = 228
Score = 78.6 bits (192), Expect = 2e-12
Identities = 35/52 (67%), Positives = 43/52 (82%)
Frame = -2
Query: 381 VKELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLP 226
+KE+KNGRLAM+AFLGF+AQ A T + PL ALG H+A+PW NFATNG S+P
Sbjct: 175 LKEIKNGRLAMVAFLGFIAQHAATGKGPLAALGEHLANPWGANFATNGVSVP 226
>gb|AAD03734.1| light harvesting complex I protein precursor [Chlamydomonas
reinhardtii] gi|40714519|dbj|BAD06923.1|
light-harvesting chlorophyll-a/b protein of photosystem
I [Chlamydomonas reinhardtii]
Length = 228
Score = 77.8 bits (190), Expect = 3e-12
Identities = 35/52 (67%), Positives = 43/52 (82%)
Frame = -2
Query: 381 VKELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLP 226
+KE+KNGRLAM+AFLGFVAQ A T + P+ ALG H+A+PW NFATNG S+P
Sbjct: 175 LKEIKNGRLAMVAFLGFVAQHAATGKGPIAALGEHLANPWGANFATNGISVP 226
>emb|CAA46235.1| light harvesting complex protein I-20 [Chlamydomonas reinhardtii]
Length = 224
Score = 77.8 bits (190), Expect = 3e-12
Identities = 35/52 (67%), Positives = 43/52 (82%)
Frame = -2
Query: 381 VKELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLP 226
+KE+KNGRLAM+AFLGFVAQ A T + P+ ALG H+A+PW NFATNG S+P
Sbjct: 171 LKEIKNGRLAMVAFLGFVAQHAATGKGPIAALGEHLANPWGANFATNGISVP 222
>ref|XP_013901123.1| light-harvesting protein of photosystem I [Monoraphidium neglectum]
gi|761971537|gb|KIZ02104.1| light-harvesting protein of
photosystem I [Monoraphidium neglectum]
Length = 226
Score = 77.0 bits (188), Expect = 5e-12
Identities = 35/52 (67%), Positives = 41/52 (78%)
Frame = -2
Query: 381 VKELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLP 226
+KE+KNGRLAM+AFLGFVAQ A T + PL AL H++ PW NFATNG SLP
Sbjct: 174 LKEVKNGRLAMVAFLGFVAQHAATGKAPLAALSEHVSSPWGANFATNGVSLP 225
>ref|XP_011399967.1| Chlorophyll a-b binding protein 4, chloroplastic [Auxenochlorella
protothecoides] gi|675354571|gb|KFM27011.1| Chlorophyll
a-b binding protein 4, chloroplastic [Auxenochlorella
protothecoides]
Length = 214
Score = 77.0 bits (188), Expect = 5e-12
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = -2
Query: 381 VKELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLPL 223
+KE+KNGRLAMLAFLGFVAQ T + P+ L HI DPWH NF TNG SLP+
Sbjct: 158 LKEIKNGRLAMLAFLGFVAQAKATGKGPITNLFEHIGDPWHNNFTTNGASLPI 210
>gb|ABD37908.1| light-harvesting chlorophyll-a/b binding protein Lhca6
[Chlamydomonas incerta]
Length = 192
Score = 76.6 bits (187), Expect = 6e-12
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = -2
Query: 381 VKELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLP 226
+KE+KNGRLAM+AFLGFVAQ A T + P+ ALG H+++PW NFATNG S+P
Sbjct: 139 LKEVKNGRLAMVAFLGFVAQHAATGKGPIAALGEHLSNPWGANFATNGISIP 190
>ref|XP_001696202.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii] gi|40714515|dbj|BAD06921.1|
light-harvesting chlorophyll-a/b protein of photosystem
I [Chlamydomonas reinhardtii]
gi|158282427|gb|EDP08179.1| light-harvesting protein of
photosystem I [Chlamydomonas reinhardtii]
Length = 243
Score = 74.3 bits (181), Expect = 3e-11
Identities = 34/52 (65%), Positives = 40/52 (76%)
Frame = -2
Query: 381 VKELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLP 226
+KE+KNGRLAMLAFLGFVAQ+ T P+ L H+ DPWH N+ATNG SLP
Sbjct: 190 LKEVKNGRLAMLAFLGFVAQKYATGAGPVDNLAAHLKDPWHVNYATNGVSLP 241
>ref|XP_005847168.1| hypothetical protein CHLNCDRAFT_35848 [Chlorella variabilis]
gi|307106821|gb|EFN55066.1| hypothetical protein
CHLNCDRAFT_35848 [Chlorella variabilis]
Length = 219
Score = 74.3 bits (181), Expect = 3e-11
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = -2
Query: 378 KELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLPL 223
KE+KNGRLAM+A LGFVAQ A T +PL+ALG H+A+P NFATNG SLPL
Sbjct: 167 KEIKNGRLAMIACLGFVAQHAATGASPLEALGAHLANPMVANFATNGVSLPL 218
>ref|XP_011397428.1| Chlorophyll a-b binding protein 6, chloroplastic [Auxenochlorella
protothecoides] gi|675352100|gb|KFM24540.1| Chlorophyll
a-b binding protein 6, chloroplastic [Auxenochlorella
protothecoides]
Length = 178
Score = 73.6 bits (179), Expect = 5e-11
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = -2
Query: 378 KELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLP 226
KE+KNGRLAMLAFLG ++Q A +PLQALG H+ DPW NFATN ++P
Sbjct: 123 KEIKNGRLAMLAFLGIISQHAANGLSPLQALGTHLGDPWANNFATNSVAVP 173
>gb|ABD37906.1| light-harvesting chlorophyll-a/b binding protein Lhca4
[Chlamydomonas incerta]
Length = 237
Score = 73.2 bits (178), Expect = 7e-11
Identities = 34/52 (65%), Positives = 40/52 (76%)
Frame = -2
Query: 381 VKELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLP 226
+KE+KNGRLAMLAFLGFVAQ+ T P+ L H+ DPWH N+ATNG SLP
Sbjct: 184 LKEVKNGRLAMLAFLGFVAQKYATGAGPVDNLVAHLKDPWHVNYATNGVSLP 235
>ref|XP_002945875.1| light harvesting complex a protein [Volvox carteri f. nagariensis]
gi|5902596|gb|AAD55568.1|AF110786_1 light harvesting
complex a protein [Volvox carteri f. nagariensis]
gi|300268690|gb|EFJ52870.1| light harvesting complex a
protein [Volvox carteri f. nagariensis]
Length = 243
Score = 72.4 bits (176), Expect = 1e-10
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = -2
Query: 381 VKELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLP 226
+KE+KNGRLAM+AFLGF AQ+ T + P+ L H+ADPWH N+A+NG S+P
Sbjct: 190 LKEIKNGRLAMVAFLGFTAQKFATGKGPIDNLAAHLADPWHVNYASNGVSVP 241
>ref|XP_005849804.1| hypothetical protein CHLNCDRAFT_59626 [Chlorella variabilis]
gi|307109464|gb|EFN57702.1| hypothetical protein
CHLNCDRAFT_59626 [Chlorella variabilis]
Length = 249
Score = 72.4 bits (176), Expect = 1e-10
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = -2
Query: 378 KELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLPL 223
+E++NGRLAM+AFLGF+AQ A T + PL L +H+ADPW NF +NG SLP+
Sbjct: 195 REIRNGRLAMMAFLGFLAQHAATGKGPLDNLADHLADPWANNFCSNGVSLPV 246
>ref|XP_002957416.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis] gi|300257220|gb|EFJ41471.1|
light-harvesting protein of photosystem I [Volvox
carteri f. nagariensis]
Length = 241
Score = 70.9 bits (172), Expect = 4e-10
Identities = 33/52 (63%), Positives = 40/52 (76%)
Frame = -2
Query: 378 KELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLPL 223
KE+KNGRLAM+A LGF AQ A T + PL L +H+ADP H NFATNG S+P+
Sbjct: 189 KEIKNGRLAMIACLGFAAQYAATGKGPLDNLADHLADPNHVNFATNGVSIPI 240
>gb|AAO16495.1| light-harvesting complex I protein [Chlamydomonas reinhardtii]
Length = 241
Score = 70.5 bits (171), Expect = 5e-10
Identities = 33/52 (63%), Positives = 40/52 (76%)
Frame = -2
Query: 378 KELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLPL 223
KE+KNGRLAM+A LGF AQ A T + PL L +H+ADP H NFATNG S+P+
Sbjct: 189 KEVKNGRLAMIACLGFAAQYAATGKGPLDNLADHLADPNHVNFATNGVSIPI 240
>gb|ABA01130.1| chloroplast light harvesting complex I protein [Chlamydomonas
incerta]
Length = 241
Score = 70.1 bits (170), Expect = 6e-10
Identities = 33/52 (63%), Positives = 40/52 (76%)
Frame = -2
Query: 378 KELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLPL 223
KE+KNGRLAM+A LGF AQ A T + PL L +H+ADP H NFATNG S+P+
Sbjct: 189 KEVKNGRLAMIACLGFAAQYAATGKGPLDNLSDHLADPNHINFATNGVSIPI 240
>dbj|BAD06924.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Chlamydomonas reinhardtii]
Length = 241
Score = 68.6 bits (166), Expect = 2e-09
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = -2
Query: 378 KELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLPL 223
KE+KNGRLAM+A LGF AQ A T + PL L +H+ADP H NFATNG S P+
Sbjct: 189 KEVKNGRLAMIACLGFAAQYAATGKGPLDNLADHLADPNHVNFATNGVSNPI 240
>ref|XP_005850709.1| hypothetical protein CHLNCDRAFT_50418 [Chlorella variabilis]
gi|307110371|gb|EFN58607.1| hypothetical protein
CHLNCDRAFT_50418 [Chlorella variabilis]
Length = 212
Score = 67.8 bits (164), Expect = 3e-09
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = -2
Query: 381 VKELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLP 226
+KE+KNGRLAMLAFLGFVAQ +PL L +H+++PW +F NG SLP
Sbjct: 147 LKEIKNGRLAMLAFLGFVAQHNAQPGSPLDQLADHLSNPWKNHFVNNGVSLP 198
>gb|ACN94453.1| photosystem I light-harvesting cholrophyll-a/b protein 2
[Dunaliella salina]
Length = 228
Score = 67.0 bits (162), Expect = 5e-09
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = -2
Query: 381 VKELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLP 226
+KELKNGRLAM+A LGF Q A T + L+ALG+H++ P+ NFATNG S+P
Sbjct: 175 LKELKNGRLAMVACLGFAGQHAATGKPILEALGDHLSSPFFNNFATNGVSVP 226
>ref|XP_011397856.1| Chlorophyll a-b binding protein 4, chloroplastic [Auxenochlorella
protothecoides] gi|675352528|gb|KFM24968.1| Chlorophyll
a-b binding protein 4, chloroplastic [Auxenochlorella
protothecoides]
Length = 176
Score = 65.9 bits (159), Expect = 1e-08
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = -2
Query: 381 VKELKNGRLAMLAFLGFVAQQAVTKQTPLQALGNHIADPWHQNFATNGTSLP 226
+KE+KNGRLAM+AF+GFVAQ VT+QTPLQ L H++ P+ N T+ +LP
Sbjct: 119 LKEIKNGRLAMIAFIGFVAQATVTRQTPLQNLTAHLSSPFDNNILTSVANLP 170