BLASTX nr result
ID: Cornus23_contig00033574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00033574
(341 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 170 1e-40
gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii] 165 3e-39
ref|XP_008654354.1| PREDICTED: uncharacterized protein LOC100193... 124 4e-26
ref|XP_008654353.1| PREDICTED: uncharacterized protein LOC100193... 124 4e-26
ref|XP_008654352.1| PREDICTED: uncharacterized protein LOC100193... 124 4e-26
ref|XP_008651726.1| PREDICTED: hypothetical protein isoform X1 [... 124 4e-26
ref|XP_008674202.1| PREDICTED: retrovirus-related Pol polyprotei... 124 4e-26
ref|XP_008674201.1| PREDICTED: uncharacterized protein LOC100279... 124 4e-26
ref|XP_008647645.1| PREDICTED: uncharacterized protein LOC100502... 124 4e-26
ref|XP_010265970.1| PREDICTED: uncharacterized protein LOC104603... 122 1e-25
ref|XP_008669041.1| PREDICTED: uncharacterized protein LOC103646... 120 3e-25
ref|XP_008441928.1| PREDICTED: uncharacterized protein LOC103485... 119 9e-25
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ... 117 3e-24
ref|NP_001175213.1| Os07g0500000 [Oryza sativa Japonica Group] g... 117 3e-24
ref|XP_010263725.1| PREDICTED: uncharacterized protein LOC104601... 116 6e-24
ref|XP_009611318.1| PREDICTED: uncharacterized protein LOC104104... 115 1e-23
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 114 3e-23
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 114 3e-23
emb|CAN61815.1| hypothetical protein VITISV_009920 [Vitis vinifera] 114 4e-23
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 112 8e-23
>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 170 bits (430), Expect(2) = 1e-40
Identities = 85/110 (77%), Positives = 92/110 (83%), Gaps = 1/110 (0%)
Frame = +1
Query: 13 CTN-PLALTLAERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSP 189
CT+ P +AERKHRHI+ET RSLLLSA V S FWGE VLTAV LIN IP+SH+SGLSP
Sbjct: 631 CTDTPEQNGVAERKHRHIVETARSLLLSAFVLSEFWGEAVLTAVSLINTIPSSHSSGLSP 690
Query: 190 YEKLYGHAPDYSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
+EKLYGH PDYSS RVFGCT FVLHP VER KLSSRSAICVFLGYG G+K
Sbjct: 691 FEKLYGHVPDYSSFRVFGCTYFVLHPHVERNKLSSRSAICVFLGYGEGKK 740
Score = 23.1 bits (48), Expect(2) = 1e-40
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +3
Query: 3 NGTVHQSPCTNT 38
+GT+HQ+ CT+T
Sbjct: 623 DGTIHQTSCTDT 634
>gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]
Length = 732
Score = 165 bits (417), Expect(2) = 3e-39
Identities = 84/110 (76%), Positives = 91/110 (82%), Gaps = 1/110 (0%)
Frame = +1
Query: 13 CTN-PLALTLAERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSP 189
CT+ P +AERKHRHIIET RSLLLSASVPS FWGE VLTAV IN+IP+S SGLSP
Sbjct: 147 CTDTPQQNGVAERKHRHIIETARSLLLSASVPSEFWGEAVLTAVHAINRIPSSVISGLSP 206
Query: 190 YEKLYGHAPDYSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
+EKLY PDYSSL+VFG TCFVL P VER+KLSSRSAICVFLGYG GQK
Sbjct: 207 FEKLYASVPDYSSLKVFGSTCFVLRPQVERSKLSSRSAICVFLGYGDGQK 256
Score = 23.5 bits (49), Expect(2) = 3e-39
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3
Query: 3 NGTVHQSPCTNT 38
+GT+HQS CT+T
Sbjct: 139 DGTLHQSSCTDT 150
>ref|XP_008654354.1| PREDICTED: uncharacterized protein LOC100193261 isoform X3 [Zea
mays]
Length = 721
Score = 124 bits (310), Expect = 4e-26
Identities = 62/101 (61%), Positives = 74/101 (73%)
Frame = +1
Query: 37 LAERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAP 216
+AERKHRHIIET R+LL+S+ VPS FWGE V TAV LIN+ P+S SG +P E L+G P
Sbjct: 454 VAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLINRQPSSKLSGKTPGEVLFGTPP 513
Query: 217 DYSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
Y LRVFGCTC+VL ERTKL+++S CVFLGY K
Sbjct: 514 RYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 554
>ref|XP_008654353.1| PREDICTED: uncharacterized protein LOC100193261 isoform X2 [Zea
mays]
Length = 725
Score = 124 bits (310), Expect = 4e-26
Identities = 62/101 (61%), Positives = 74/101 (73%)
Frame = +1
Query: 37 LAERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAP 216
+AERKHRHIIET R+LL+S+ VPS FWGE V TAV LIN+ P+S SG +P E L+G P
Sbjct: 458 VAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLINRQPSSKLSGKTPGEVLFGTPP 517
Query: 217 DYSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
Y LRVFGCTC+VL ERTKL+++S CVFLGY K
Sbjct: 518 RYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 558
>ref|XP_008654352.1| PREDICTED: uncharacterized protein LOC100193261 isoform X1 [Zea
mays]
Length = 761
Score = 124 bits (310), Expect = 4e-26
Identities = 62/101 (61%), Positives = 74/101 (73%)
Frame = +1
Query: 37 LAERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAP 216
+AERKHRHIIET R+LL+S+ VPS FWGE V TAV LIN+ P+S SG +P E L+G P
Sbjct: 494 VAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLINRQPSSKLSGKTPGEVLFGTPP 553
Query: 217 DYSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
Y LRVFGCTC+VL ERTKL+++S CVFLGY K
Sbjct: 554 RYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 594
>ref|XP_008651726.1| PREDICTED: hypothetical protein isoform X1 [Zea mays]
Length = 989
Score = 124 bits (310), Expect = 4e-26
Identities = 62/101 (61%), Positives = 74/101 (73%)
Frame = +1
Query: 37 LAERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAP 216
+AERKHRHIIET R+LL+S+ VPS FWGE V TAV LIN+ P+S SG +P E L+G P
Sbjct: 228 VAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLINRQPSSKLSGKTPGEVLFGTPP 287
Query: 217 DYSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
Y LRVFGCTC+VL ERTKL+++S CVFLGY K
Sbjct: 288 RYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 328
>ref|XP_008674202.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Zea mays]
Length = 756
Score = 124 bits (310), Expect = 4e-26
Identities = 62/101 (61%), Positives = 74/101 (73%)
Frame = +1
Query: 37 LAERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAP 216
+AERKHRHIIET R+LL+S+ VPS FWGE V TAV LIN+ P+S SG +P E L+G P
Sbjct: 236 VAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLINRQPSSKLSGKTPGEVLFGTPP 295
Query: 217 DYSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
Y LRVFGCTC+VL ERTKL+++S CVFLGY K
Sbjct: 296 RYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 336
>ref|XP_008674201.1| PREDICTED: uncharacterized protein LOC100279087 isoform X1 [Zea mays]
Length = 1376
Score = 124 bits (310), Expect = 4e-26
Identities = 62/101 (61%), Positives = 74/101 (73%)
Frame = +1
Query: 37 LAERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAP 216
+AERKHRHIIET R+LL+S+ VPS FWGE V TAV LIN+ P+S SG +P E L+G P
Sbjct: 903 VAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLINRQPSSKLSGKTPGEVLFGTPP 962
Query: 217 DYSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
Y LRVFGCTC+VL ERTKL+++S CVFLGY K
Sbjct: 963 RYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 1003
>ref|XP_008647645.1| PREDICTED: uncharacterized protein LOC100502300 isoform X2 [Zea
mays]
Length = 1180
Score = 124 bits (310), Expect = 4e-26
Identities = 62/101 (61%), Positives = 74/101 (73%)
Frame = +1
Query: 37 LAERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAP 216
+AERKHRHIIET R+LL+S+ VPS FWGE V TAV LIN+ P+S SG +P E L+G P
Sbjct: 419 VAERKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLINRQPSSKLSGKTPGEVLFGTPP 478
Query: 217 DYSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
Y LRVFGCTC+VL ERTKL+++S CVFLGY K
Sbjct: 479 RYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 519
>ref|XP_010265970.1| PREDICTED: uncharacterized protein LOC104603606 [Nelumbo nucifera]
Length = 778
Score = 122 bits (306), Expect = 1e-25
Identities = 56/100 (56%), Positives = 68/100 (68%)
Frame = +1
Query: 40 AERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAPD 219
AERKH HI++ R+ L+S+S P FWGE LT V IN+IP+ +SPYE+LYGH PD
Sbjct: 441 AERKHMHILDIVRAFLISSSCPERFWGEAALTVVYTINRIPSPVIGNISPYERLYGHCPD 500
Query: 220 YSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
Y SLRVFGCTCFVL E TKL ++ +C FL YG K
Sbjct: 501 YQSLRVFGCTCFVLLQPHEYTKLEPKARLCCFLRYGIEHK 540
>ref|XP_008669041.1| PREDICTED: uncharacterized protein LOC103646095 [Zea mays]
Length = 704
Score = 120 bits (302), Expect = 3e-25
Identities = 61/101 (60%), Positives = 73/101 (72%)
Frame = +1
Query: 37 LAERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAP 216
+AE KHRHIIET R+LL+S+ VPS FWGE V TAV LIN+ P+S SG +P E L+G P
Sbjct: 525 VAECKHRHIIETARTLLISSFVPSHFWGEAVSTAVYLINRQPSSKLSGKTPGEVLFGTPP 584
Query: 217 DYSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
Y LRVFGCTC+VL ERTKL+++S CVFLGY K
Sbjct: 585 RYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 625
>ref|XP_008441928.1| PREDICTED: uncharacterized protein LOC103485923 [Cucumis melo]
Length = 644
Score = 119 bits (298), Expect = 9e-25
Identities = 56/100 (56%), Positives = 70/100 (70%)
Frame = +1
Query: 40 AERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAPD 219
AERKHRHI+++ R+LLLSAS P FWGE LT+V IN++P+S +SP+EKLYG P+
Sbjct: 399 AERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPN 458
Query: 220 YSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
YS+L+ FGC CFVL E TKL R + FLGYG K
Sbjct: 459 YSNLKTFGCACFVLLHPHEHTKLEPRVRLYCFLGYGTEHK 498
>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group] gi|78708691|gb|ABB47666.1|
retrotransposon protein, putative, unclassified,
expressed [Oryza sativa Japonica Group]
Length = 1682
Score = 117 bits (294), Expect = 3e-24
Identities = 58/101 (57%), Positives = 71/101 (70%)
Frame = +1
Query: 37 LAERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAP 216
+AERKHRHIIET R+LL+++ VP+ FW E + TAV LIN P+S G SP E L+G P
Sbjct: 484 VAERKHRHIIETARTLLIASFVPAHFWAEAISTAVYLINMQPSSSLQGRSPGEVLFGSPP 543
Query: 217 DYSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
Y LRVFGCTC+VL ERTKL+++S CVFLGY K
Sbjct: 544 RYDHLRVFGCTCYVLLAPRERTKLTAQSVECVFLGYSLEHK 584
>ref|NP_001175213.1| Os07g0500000 [Oryza sativa Japonica Group]
gi|255677790|dbj|BAH93941.1| Os07g0500000 [Oryza sativa
Japonica Group]
Length = 662
Score = 117 bits (294), Expect = 3e-24
Identities = 58/101 (57%), Positives = 71/101 (70%)
Frame = +1
Query: 37 LAERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAP 216
+AERKHRHIIET R+LL+++ VP+ FW E + TAV LIN P+S G SP E L+G P
Sbjct: 262 VAERKHRHIIETARTLLIASFVPAHFWAEAISTAVYLINMQPSSSLHGKSPGEMLFGSPP 321
Query: 217 DYSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
Y LRVFGCTC+VL ERTKL+++S CVFLGY K
Sbjct: 322 RYDHLRVFGCTCYVLLAPRERTKLTAQSVECVFLGYSLEHK 362
>ref|XP_010263725.1| PREDICTED: uncharacterized protein LOC104601921 [Nelumbo nucifera]
Length = 670
Score = 116 bits (291), Expect = 6e-24
Identities = 53/99 (53%), Positives = 66/99 (66%)
Frame = +1
Query: 43 ERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAPDY 222
ERKH+HI++ R+LL+S+S P FWGE L AV IN+IP+ +SPYE+LYGH DY
Sbjct: 415 ERKHKHILDIVRALLISSSCPERFWGETALIAVYTINRIPSPVIGNISPYERLYGHCLDY 474
Query: 223 SSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
SL VFGC CFVL E TK ++ +C FLGYG K
Sbjct: 475 QSLHVFGCACFVLLQPHEHTKSEPKARLCCFLGYGIEHK 513
>ref|XP_009611318.1| PREDICTED: uncharacterized protein LOC104104835 [Nicotiana
tomentosiformis]
Length = 832
Score = 115 bits (288), Expect = 1e-23
Identities = 51/101 (50%), Positives = 67/101 (66%)
Frame = +1
Query: 37 LAERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAP 216
+ ERKH+H++E +R+LL + +P FWG VLTA LIN++P+ LSP+EKL+GH P
Sbjct: 445 IVERKHKHLLEVSRALLFQSKLPLKFWGGCVLTATYLINRMPSPLLLKLSPFEKLHGHPP 504
Query: 217 DYSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
Y LR FGC CF P V R K SR+ C+FLGY G+K
Sbjct: 505 SYDHLRSFGCLCFATFPKVGRDKFQSRAIACIFLGYPCGKK 545
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 114 bits (285), Expect = 3e-23
Identities = 52/99 (52%), Positives = 68/99 (68%)
Frame = +1
Query: 43 ERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAPDY 222
ERKHRHI+ +R+LL AS+P FWGE V+TA LIN+ P+S +GLSPYE L+G PDY
Sbjct: 670 ERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPYELLHGCKPDY 729
Query: 223 SSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
LRVFG C+ + ++ K RS +C+F+GY GQK
Sbjct: 730 DQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQK 768
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 114 bits (285), Expect = 3e-23
Identities = 52/99 (52%), Positives = 68/99 (68%)
Frame = +1
Query: 43 ERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAPDY 222
ERKHRHI+ +R+LL AS+P FWGE V+TA LIN+ P+S +GLSPYE L+G PDY
Sbjct: 670 ERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPYELLHGCKPDY 729
Query: 223 SSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
LRVFG C+ + ++ K RS +C+F+GY GQK
Sbjct: 730 DQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQK 768
>emb|CAN61815.1| hypothetical protein VITISV_009920 [Vitis vinifera]
Length = 1064
Score = 114 bits (284), Expect = 4e-23
Identities = 57/100 (57%), Positives = 67/100 (67%)
Frame = +1
Query: 40 AERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAPD 219
AERK RHI++T R+LLLSA VP FWGE L AV IN+IP++ +PYE+L+G PD
Sbjct: 413 AERKLRHILDTVRALLLSAKVPVPFWGEAGLHAVHAINRIPSAVIHNQTPYERLFGSPPD 472
Query: 220 YSSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
Y LR FG CFVL E KL SRS +C FLGYG QK
Sbjct: 473 YHHLRSFGSACFVLLQPHEHNKLESRSRLCCFLGYGETQK 512
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 112 bits (281), Expect = 8e-23
Identities = 53/99 (53%), Positives = 66/99 (66%)
Frame = +1
Query: 43 ERKHRHIIETTRSLLLSASVPSAFWGEVVLTAVQLINKIPTSHTSGLSPYEKLYGHAPDY 222
ERKHRHI+ R++L AS+P FWGE VLTA LIN+ PTS +GLSPYE L+ P+Y
Sbjct: 248 ERKHRHILNVARAILFQASLPIQFWGEAVLTAAYLINRTPTSLHNGLSPYEILHNSKPNY 307
Query: 223 SSLRVFGCTCFVLHPSVERTKLSSRSAICVFLGYGAGQK 339
LRVFG C+V S ++ K RS +CVF+GY QK
Sbjct: 308 EHLRVFGSACYVHRASRDKDKFGERSRLCVFIGYPFAQK 346