BLASTX nr result
ID: Cornus23_contig00033451
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00033451
(433 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005643444.1| hypothetical protein COCSUDRAFT_31477 [Cocco... 86 1e-14
gb|KPQ35944.1| putative sigma-54 modulation protein [Phormidesmi... 78 2e-12
ref|XP_010666127.1| PREDICTED: ribosome-binding factor PSRP1, ch... 77 4e-12
ref|XP_008460813.1| PREDICTED: ribosome-binding factor PSRP1, ch... 77 5e-12
ref|XP_004147328.1| PREDICTED: ribosome-binding factor PSRP1, ch... 77 5e-12
gb|KRH64302.1| hypothetical protein GLYMA_04G228400 [Glycine max] 77 6e-12
gb|KHN19563.1| 30S ribosomal protein 1, chloroplastic [Glycine s... 77 6e-12
ref|NP_001241953.1| uncharacterized protein LOC100784915 [Glycin... 77 6e-12
ref|XP_011003295.1| PREDICTED: ribosome-binding factor PSRP1, ch... 76 8e-12
ref|XP_010048505.1| PREDICTED: ribosome-binding factor PSRP1, ch... 75 2e-11
gb|EPS59457.1| hypothetical protein M569_15350, partial [Genlise... 75 2e-11
ref|XP_013660994.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-bin... 74 3e-11
emb|CDY19830.1| BnaA09g04830D [Brassica napus] 74 3e-11
ref|XP_001758609.1| predicted protein [Physcomitrella patens] gi... 74 3e-11
ref|XP_008347268.1| PREDICTED: ribosome-binding factor PSRP1, ch... 74 4e-11
ref|XP_008376813.1| PREDICTED: ribosome-binding factor PSRP1, ch... 74 4e-11
ref|WP_015170648.1| ribosome-associated inhibitor A/sigma 54 mod... 74 4e-11
ref|XP_003526761.1| PREDICTED: ribosome-binding factor PSRP1, ch... 74 4e-11
ref|XP_002321945.2| hypothetical protein POPTR_0015s00430g [Popu... 74 4e-11
ref|XP_010519569.1| PREDICTED: ribosome-binding factor PSRP1, ch... 74 5e-11
>ref|XP_005643444.1| hypothetical protein COCSUDRAFT_31477 [Coccomyxa subellipsoidea
C-169] gi|384245406|gb|EIE18900.1| hypothetical protein
COCSUDRAFT_31477 [Coccomyxa subellipsoidea C-169]
Length = 274
Score = 85.9 bits (211), Expect = 1e-14
Identities = 39/76 (51%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = -2
Query: 417 DEQELFPTDGPSDG-PEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIY 241
D + PTD + PE+VRTK F+L+PM+ +A+E VEQ+GHPFF+FRDK + +V+V+Y
Sbjct: 199 DLVDKLPTDQEAAAFPEVVRTKTFVLEPMSLEDALEQVEQVGHPFFVFRDKSSKQVRVLY 258
Query: 240 KRQTHGYGLIIPSNEE 193
KR+T GYG+I+P ++
Sbjct: 259 KRKTRGYGVIVPQLDD 274
>gb|KPQ35944.1| putative sigma-54 modulation protein [Phormidesmis priestleyi Ana]
Length = 223
Score = 78.2 bits (191), Expect = 2e-12
Identities = 38/75 (50%), Positives = 54/75 (72%)
Frame = -2
Query: 429 DSSTDEQELFPTDGPSDGPEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQ 250
DSS D E+ + P+ PE+VRTKYF + PMT +EA+E +E +GH F++FR+ DT+E+
Sbjct: 123 DSSPDISEVLNSQ-PALPPEVVRTKYFAMPPMTVQEALENLELVGHDFYMFRNIDTDEIN 181
Query: 249 VIYKRQTHGYGLIIP 205
VIY+R GYGL+ P
Sbjct: 182 VIYERNHKGYGLLQP 196
>ref|XP_010666127.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Beta
vulgaris subsp. vulgaris] gi|870843026|gb|KMS96293.1|
hypothetical protein BVRB_000070 [Beta vulgaris subsp.
vulgaris]
Length = 300
Score = 77.4 bits (189), Expect = 4e-12
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = -2
Query: 429 DSSTDEQELFPTDGPSDGPEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQ 250
D+ +E E P D EIVRTKYF + P+T EAVE +E + H F+ FR+++T E+
Sbjct: 203 DTVEEEVEAAPVPVEEDIEEIVRTKYFDMPPLTLNEAVEQLENVDHDFYAFRNEETGEIN 262
Query: 249 VIYKRQTHGYGLIIPSN--EE*LVPFPTQPQLE 157
++YKR+ GYGLIIP + E L P Q E
Sbjct: 263 ILYKRKEGGYGLIIPKDGKTEKLEPLEVQHDRE 295
>ref|XP_008460813.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis
melo]
Length = 310
Score = 77.0 bits (188), Expect = 5e-12
Identities = 34/71 (47%), Positives = 51/71 (71%)
Frame = -2
Query: 417 DEQELFPTDGPSDGPEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIYK 238
+E+E+F DG EIVRTKYF + P+T EA+E ++ + H F+ FR+++T E+ ++YK
Sbjct: 216 EEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYK 275
Query: 237 RQTHGYGLIIP 205
R+ GYGLIIP
Sbjct: 276 RKDGGYGLIIP 286
>ref|XP_004147328.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis
sativus]
Length = 310
Score = 77.0 bits (188), Expect = 5e-12
Identities = 34/71 (47%), Positives = 51/71 (71%)
Frame = -2
Query: 417 DEQELFPTDGPSDGPEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIYK 238
+E+E+F DG EIVRTKYF + P+T EA+E ++ + H F+ FR+++T E+ ++YK
Sbjct: 216 EEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYK 275
Query: 237 RQTHGYGLIIP 205
R+ GYGLIIP
Sbjct: 276 RKDGGYGLIIP 286
>gb|KRH64302.1| hypothetical protein GLYMA_04G228400 [Glycine max]
Length = 291
Score = 76.6 bits (187), Expect = 6e-12
Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Frame = -2
Query: 417 DEQELFPTDGPSDGPEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIYK 238
+++ L P + E+VRTKYF + P+T EA+E +E + H F+ FR+++T E+ ++YK
Sbjct: 197 EDEILSPQEEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVYK 256
Query: 237 RQTHGYGLIIPSNE---E*LVPFPTQPQLEST 151
R+ GYGLI+P + E L P +P +ES+
Sbjct: 257 RKEGGYGLIVPKGDGEAEKLEPVVLEPAIESS 288
>gb|KHN19563.1| 30S ribosomal protein 1, chloroplastic [Glycine soja]
Length = 291
Score = 76.6 bits (187), Expect = 6e-12
Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Frame = -2
Query: 417 DEQELFPTDGPSDGPEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIYK 238
+++ L P + E+VRTKYF + P+T EA+E +E + H F+ FR+++T E+ ++YK
Sbjct: 197 EDEILSPQEEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVYK 256
Query: 237 RQTHGYGLIIPSNE---E*LVPFPTQPQLEST 151
R+ GYGLI+P + E L P +P +ES+
Sbjct: 257 RKEGGYGLIVPKGDGEAETLEPVVLEPAIESS 288
>ref|NP_001241953.1| uncharacterized protein LOC100784915 [Glycine max]
gi|255634767|gb|ACU17745.1| unknown [Glycine max]
Length = 291
Score = 76.6 bits (187), Expect = 6e-12
Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Frame = -2
Query: 417 DEQELFPTDGPSDGPEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIYK 238
+++ L P + E+VRTKYF + P+T EA+E +E + H F+ FR+++T E+ ++YK
Sbjct: 197 EDEILSPQEEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVYK 256
Query: 237 RQTHGYGLIIPSNE---E*LVPFPTQPQLEST 151
R+ GYGLI+P + E L P +P +ES+
Sbjct: 257 RKEGGYGLIVPKGDGEAEKLEPVVLEPAIESS 288
>ref|XP_011003295.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Populus
euphratica]
Length = 305
Score = 76.3 bits (186), Expect = 8e-12
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Frame = -2
Query: 417 DEQELFPTDGPSDGPEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIYK 238
DE E+ + E+VRTKYF + P+T EA+E +E + H F+ FRD++T E+ +IYK
Sbjct: 211 DEDEVSQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINIIYK 270
Query: 237 RQTHGYGLIIPSNE---E*LVPFPTQPQLE 157
R++ GYGLIIP E L P +P E
Sbjct: 271 RKSGGYGLIIPKGNGEAERLEPLVVEPARE 300
>ref|XP_010048505.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Eucalyptus
grandis] gi|629124652|gb|KCW89077.1| hypothetical
protein EUGRSUZ_A01406 [Eucalyptus grandis]
Length = 318
Score = 75.1 bits (183), Expect = 2e-11
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Frame = -2
Query: 417 DEQELFPTDGPSDGPEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIYK 238
D+ E P D EI+RTKYF + P+T EA+E +E + H F+ FR+++T E+ ++YK
Sbjct: 224 DDVEDVPQQEDEDYDEIIRTKYFEMPPLTVAEAIEQLENVDHDFYGFRNEETGEINILYK 283
Query: 237 RQTHGYGLIIPSNE---E*LVPFPTQPQLE 157
R+ GYGLI+P + + L P +P E
Sbjct: 284 RKAGGYGLIVPKGDGKAQKLEPVVVEPAKE 313
>gb|EPS59457.1| hypothetical protein M569_15350, partial [Genlisea aurea]
Length = 216
Score = 74.7 bits (182), Expect = 2e-11
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = -2
Query: 429 DSSTDEQE---LFPTDGPSDGPEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTN 259
DS DE+E L + +IVRTKYF + P+T EAVE +E + H F+ FR+++T
Sbjct: 133 DSDADEEEAVELLDEEDDDVQEDIVRTKYFEMAPLTVSEAVEQMENVDHDFYGFRNEETG 192
Query: 258 EVQVIYKRQTHGYGLIIPSNEE 193
E+ +IY+R+ GYG+IIP E+
Sbjct: 193 EINIIYRREAGGYGIIIPKQEK 214
>ref|XP_013660994.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-binding factor PSRP1,
chloroplastic [Brassica napus]
Length = 310
Score = 74.3 bits (181), Expect = 3e-11
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = -2
Query: 432 IDSSTDEQELFPTDGPSDG--PEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTN 259
++ + D E P G D EIVRTKYF + P+T EAVE +E + H F+ F++++T
Sbjct: 209 VEDAEDVSESIPGGGEEDDLIKEIVRTKYFEMPPLTVSEAVEQLELVAHDFYGFQNEETG 268
Query: 258 EVQVIYKRQTHGYGLIIPSNE 196
E+ ++YKR+ GYGLIIP +
Sbjct: 269 EINIVYKRREGGYGLIIPKKD 289
>emb|CDY19830.1| BnaA09g04830D [Brassica napus]
Length = 304
Score = 74.3 bits (181), Expect = 3e-11
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = -2
Query: 432 IDSSTDEQELFPTDGPSDG--PEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTN 259
++ + D E P G D EIVRTKYF + P+T EAVE +E + H F+ F++++T
Sbjct: 203 VEDAEDVSESIPGGGEEDDLIKEIVRTKYFEMPPLTVSEAVEQLELVAHDFYGFQNEETG 262
Query: 258 EVQVIYKRQTHGYGLIIPSNE 196
E+ ++YKR+ GYGLIIP +
Sbjct: 263 EINIVYKRREGGYGLIIPKKD 283
>ref|XP_001758609.1| predicted protein [Physcomitrella patens]
gi|162690219|gb|EDQ76587.1| predicted protein
[Physcomitrella patens]
Length = 221
Score = 74.3 bits (181), Expect = 3e-11
Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = -2
Query: 387 PSDGP-EIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIYKRQTHGYGLI 211
P D P EIVRTKYF + PM P EA+E + +GH F+ FR+ ++ E+ ++YKR GYG+I
Sbjct: 144 PDDLPDEIVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINILYKRTHGGYGII 203
Query: 210 IPSNEE 193
+P NEE
Sbjct: 204 VPRNEE 209
>ref|XP_008347268.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like [Malus
domestica]
Length = 214
Score = 73.9 bits (180), Expect = 4e-11
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = -2
Query: 417 DEQELFPTDGPSDG-PEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIY 241
+E+E P + D E+VRTKYF + P+T EAV+ +E + H F+ FR+++T E+ VIY
Sbjct: 119 EEEEAVPQEQEEDFIDEVVRTKYFDMPPLTVAEAVDQLENVDHDFYAFRNEETGEINVIY 178
Query: 240 KRQTHGYGLIIP 205
KR+ GYGLIIP
Sbjct: 179 KREEGGYGLIIP 190
>ref|XP_008376813.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Malus
domestica]
Length = 293
Score = 73.9 bits (180), Expect = 4e-11
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = -2
Query: 417 DEQELFPTDGPSDG-PEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIY 241
+E+E P + D E+VRTKYF + P+T EAV+ +E + H F+ FR+++T E+ VIY
Sbjct: 198 EEEEAVPQEQEEDFIDEVVRTKYFDMPPLTVAEAVDQLENVDHDFYAFRNEETGEINVIY 257
Query: 240 KRQTHGYGLIIP 205
KR+ GYGLIIP
Sbjct: 258 KREEGGYGLIIP 269
>ref|WP_015170648.1| ribosome-associated inhibitor A/sigma 54 modulation protein
[Geitlerinema sp. PCC 7407] gi|427983936|gb|AFY65080.1|
SSU ribosomal protein S30P,sigma 54 modulation protein
[Geitlerinema sp. PCC 7407]
Length = 215
Score = 73.9 bits (180), Expect = 4e-11
Identities = 34/78 (43%), Positives = 49/78 (62%)
Frame = -2
Query: 429 DSSTDEQELFPTDGPSDGPEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQ 250
D+S +L P PE++RTKYF + PMT EA+E +E + H F++FR+ +T E+
Sbjct: 115 DASFSVPDLIGDRAPELPPEVIRTKYFAMPPMTVEEALEQLELVDHDFYMFRNAETGEIN 174
Query: 249 VIYKRQTHGYGLIIPSNE 196
VIY+R GYGL+ P E
Sbjct: 175 VIYERNHGGYGLLQPHGE 192
>ref|XP_003526761.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Glycine
max] gi|947105244|gb|KRH53627.1| hypothetical protein
GLYMA_06G136500 [Glycine max]
Length = 291
Score = 73.9 bits (180), Expect = 4e-11
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Frame = -2
Query: 417 DEQELFPTDGPSDGPEIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIYK 238
+++ L P + E+VRTKYF + P+T EA+E +E + H F+ FR+++T E+ ++YK
Sbjct: 197 EDEILSPREEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVYK 256
Query: 237 RQTHGYGLIIPSNE---E*LVPFPTQPQLEST 151
R+ GYGLIIP + E L +P +ES+
Sbjct: 257 RKEGGYGLIIPKGDGEAEKLESVVLEPAIESS 288
>ref|XP_002321945.2| hypothetical protein POPTR_0015s00430g [Populus trichocarpa]
gi|118488335|gb|ABK95986.1| unknown [Populus
trichocarpa] gi|550321660|gb|EEF06072.2| hypothetical
protein POPTR_0015s00430g [Populus trichocarpa]
Length = 306
Score = 73.9 bits (180), Expect = 4e-11
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = -2
Query: 372 EIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIYKRQTHGYGLIIPSNE- 196
E+VRTKYF + P+T EA+E +E + H F+ FRD++T E+ +IYKR+ GYGLIIP
Sbjct: 227 EVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINIIYKRKAGGYGLIIPKGNG 286
Query: 195 --E*LVPFPTQPQLE 157
E L P +P E
Sbjct: 287 EAERLEPLVVEPARE 301
>ref|XP_010519569.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Tarenaya
hassleriana]
Length = 314
Score = 73.6 bits (179), Expect = 5e-11
Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
Frame = -2
Query: 372 EIVRTKYFMLDPMTPREAVELVEQLGHPFFLFRDKDTNEVQVIYKRQTHGYGLIIPSNE- 196
EIVRTK+F + P+T EA+E +E + H F+ FR+++T E+ ++YKR+ GYGLIIP +
Sbjct: 235 EIVRTKFFEMPPLTVAEAIEQLELVDHDFYGFRNEETGEINIVYKRKEGGYGLIIPKEDG 294
Query: 195 --E*LVPFPTQPQLEST 151
E + P T+P ES+
Sbjct: 295 KAEKVEPLATEPVKESS 311