BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00033299
         (337 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010243933.1| PREDICTED: twinkle homolog protein, chloropl...    49   6e-10
ref|XP_008225676.1| PREDICTED: twinkle homolog protein, chloropl...    48   4e-09
ref|XP_011460420.1| PREDICTED: twinkle homolog protein, chloropl...    52   2e-08

>ref|XP_010243933.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
           [Nelumbo nucifera]
          Length = 769

 Score = 48.5 bits (114), Expect(2) = 6e-10
 Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
 Frame = -3

Query: 326 MLCPHRSPLQKLFNSKVLLGSKQFLKPTPFPALPTTPSS----PTHRLIFSNLPSKPISK 159
           +L PHR PL  L +S +L+GSK  L+  PF  +P + S      T+RL+FS  P KPIS 
Sbjct: 59  VLHPHR-PLHTLLSSNILMGSKNLLRSAPF-TIPISFSRLHHFHTYRLLFSTSPPKPISI 116

Query: 158 IHPLALRTS 132
            H L ++ S
Sbjct: 117 FHHLIVKKS 125



 Score = 41.6 bits (96), Expect(2) = 6e-10
 Identities = 18/38 (47%), Positives = 30/38 (78%)
 Frame = -1

Query: 115 PKEKGLDSVQIGAILRGKLEMLGINDDICKPGQYVHLL 2
           P+E+ +DS+++ A L+ +LEM+GI+   C+PGQY HL+
Sbjct: 144 PEEETIDSIRLNA-LKKRLEMIGIDCTSCRPGQYNHLI 180


>ref|XP_008225676.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
           [Prunus mume]
          Length = 698

 Score = 48.1 bits (113), Expect(2) = 4e-09
 Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
 Frame = -3

Query: 314 HRSPLQKLF----NSKVLLGSKQFLKPTPFPALPTTPSSP----THRLIFSNLPSKPISK 159
           HR PL+KL     ++ +L+G+ Q  K TP P  P TPS      +HRL+FS L  KP+SK
Sbjct: 6   HR-PLRKLSFLTSSAGLLMGTVQLFKSTPCPN-PLTPSQRHSFHSHRLVFSPLSPKPMSK 63

Query: 158 IHPLALRTSWIS 123
             PL LRT+  S
Sbjct: 64  TRPLCLRTNGYS 75



 Score = 39.3 bits (90), Expect(2) = 4e-09
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = -1

Query: 118 NPKEKGLDSVQIGAILRGKLEMLGINDDICKPGQYVHLL 2
           N +EK +D  Q+   L+ KLEMLGI+  IC PGQY HL+
Sbjct: 90  NAEEKRVDFNQLSR-LKLKLEMLGIDYGICMPGQYNHLI 127


>ref|XP_011460420.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
           isoform X1 [Fragaria vesca subsp. vesca]
          Length = 702

 Score = 51.6 bits (122), Expect(2) = 2e-08
 Identities = 33/72 (45%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
 Frame = -3

Query: 314 HRSPLQKLF----NSKVLLGSKQFLKPTPF----PALPTTPSSPTHRLIFSNLPSKPISK 159
           HR PL KL     ++ +L+ SKQ LK TPF    P  P T    +HRL+FS  P KP SK
Sbjct: 6   HR-PLHKLSALSSSTSLLMASKQLLKSTPFTNPSPPSPQTHLFHSHRLVFSAFPPKPTSK 64

Query: 158 IHPLALRTSWIS 123
             P  LRT+  S
Sbjct: 65  ARPFCLRTNGYS 76



 Score = 33.1 bits (74), Expect(2) = 2e-08
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = -1

Query: 73  LRGKLEMLGINDDICKPGQYVHLL 2
           L  KL+ +GI+D+IC+P QY HL+
Sbjct: 102 LTKKLKEIGIDDEICEPAQYGHLI 125