BLASTX nr result
ID: Cornus23_contig00032720
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cornus23_contig00032720 (393 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 62 1e-14 emb|CAN68285.1| hypothetical protein VITISV_017014 [Vitis vinifera] 45 6e-09 emb|CAN78912.1| hypothetical protein VITISV_004522 [Vitis vinifera] 45 1e-07 emb|CAN82574.1| hypothetical protein VITISV_034720 [Vitis vinifera] 44 4e-07 gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 60 5e-07 ref|XP_010273505.1| PREDICTED: retrovirus-related Pol polyprotei... 58 2e-06 emb|CAN81994.1| hypothetical protein VITISV_043102 [Vitis vinifera] 42 3e-06 emb|CAN60145.1| hypothetical protein VITISV_019412 [Vitis vinifera] 43 6e-06 emb|CAN63575.1| hypothetical protein VITISV_003796 [Vitis vinifera] 46 1e-05 >sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Includes: RecName: Full=Protease; Includes: RecName: Full=Reverse transcriptase; Includes: RecName: Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed protein product [Nicotiana tabacum] Length = 1328 Score = 62.4 bits (150), Expect(3) = 1e-14 Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%) Frame = +2 Query: 110 KRYVERVLEEFNMKNVKAIVMPLVGHSKLN-KLCPTNKEEKDAMTNISYSSS 262 ++Y+ERVLE FNMKN K + PL GH KL+ K+CPT EEK M + YSS+ Sbjct: 1063 EKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSA 1114 Score = 42.0 bits (97), Expect(3) = 1e-14 Identities = 17/33 (51%), Positives = 25/33 (75%) Frame = +3 Query: 6 FSRTSVDQCDYFRKFSDGNFIILLFYVDEEVVV 104 + +T D C YF++FS+ NFIILL YVD+ ++V Sbjct: 983 YLKTYSDPCVYFKRFSENNFIILLLYVDDMLIV 1015 Score = 21.2 bits (43), Expect(3) = 1e-14 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = +1 Query: 91 RKLWLSQE 114 RKLWLSQE Sbjct: 1056 RKLWLSQE 1063 >emb|CAN68285.1| hypothetical protein VITISV_017014 [Vitis vinifera] Length = 328 Score = 45.4 bits (106), Expect(3) = 6e-09 Identities = 19/34 (55%), Positives = 25/34 (73%) Frame = +3 Query: 3 GFSRTSVDQCDYFRKFSDGNFIILLFYVDEEVVV 104 G+ RT+ D C + KFSDG FIILL YVD+ ++V Sbjct: 18 GYDRTASDHCVFVNKFSDGEFIILLLYVDDMLIV 51 Score = 39.7 bits (91), Expect(3) = 6e-09 Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Frame = +2 Query: 116 YVERVLEEFNMKNVKAIVMPLVGHSKL-NKLCPTNKEEKDAMTNISYSS 259 Y+E+VL++FNM K + PL H KL +K ++++EK+ M + Y+S Sbjct: 101 YIEKVLDKFNMGKAKLVSSPLGSHLKLSSKQSLSSEKEKEEMRKVPYAS 149 Score = 21.2 bits (43), Expect(3) = 6e-09 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = +1 Query: 91 RKLWLSQE 114 RKLWLSQE Sbjct: 92 RKLWLSQE 99 >emb|CAN78912.1| hypothetical protein VITISV_004522 [Vitis vinifera] Length = 882 Score = 45.1 bits (105), Expect(2) = 1e-07 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%) Frame = +2 Query: 110 KRYVERVLEEFNMKNVKAIVMPLVGHSKL-NKLCPTNKEEKDAMTNISYSS 259 ++Y+E+VLE FNM K + PL H KL N+ P+ +EK+ M + Y+S Sbjct: 714 EQYIEKVLERFNMSKAKVVSSPLASHFKLNNRHNPSTDKEKEDMIKVLYAS 764 Score = 37.4 bits (85), Expect(2) = 1e-07 Identities = 16/38 (42%), Positives = 26/38 (68%) Frame = +3 Query: 3 GFSRTSVDQCDYFRKFSDGNFIILLFYVDEEVVVITRD 116 G+ +T+ D + +KFSD +F+ILL YVD+ ++V D Sbjct: 651 GYRKTTSDHYVFVQKFSDDDFVILLLYVDDILIVGRND 688 >emb|CAN82574.1| hypothetical protein VITISV_034720 [Vitis vinifera] Length = 1172 Score = 43.5 bits (101), Expect(2) = 4e-07 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Frame = +2 Query: 116 YVERVLEEFNMKNVKAIVMPLVGHSKLNK-LCPTNKEEKDAMTNISYSSS 262 YV++VL FNM K + PL H KL+K P +EE+D M+ + Y+S+ Sbjct: 961 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASA 1010 Score = 37.0 bits (84), Expect(2) = 4e-07 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = +3 Query: 3 GFSRTSVDQCDYFRKFSDGNFIILLFYVDEEVV 101 GF R D C YF+ F D ++IILL YVD+ ++ Sbjct: 892 GFKRXEADHCCYFKSF-DNSYIILLLYVDDMLI 923 >gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] Length = 687 Score = 60.5 bits (145), Expect = 5e-07 Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 1/51 (1%) Frame = +2 Query: 110 KRYVERVLEEFNMKNVKAIVMPLVGHSKLNK-LCPTNKEEKDAMTNISYSS 259 + Y+ERVLE FNMKN K + PL H KL+K CPT ++EK++M++I YSS Sbjct: 423 ENYIERVLERFNMKNAKPVNTPLAAHFKLSKRCCPTTEKEKESMSHIPYSS 473 >ref|XP_010273505.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Nelumbo nucifera] Length = 229 Score = 58.2 bits (139), Expect = 2e-06 Identities = 25/54 (46%), Positives = 38/54 (70%), Gaps = 1/54 (1%) Frame = +2 Query: 104 YHKRYVERVLEEFNMKNVKAIVMPLVGHSKLN-KLCPTNKEEKDAMTNISYSSS 262 + ++Y+E+VLE FNM N K + PL GH KLN K CPT++++K M + Y+S+ Sbjct: 84 FQEKYIEKVLERFNMSNAKPMTTPLAGHFKLNTKQCPTSEKDKAEMKKVPYASA 137 >emb|CAN81994.1| hypothetical protein VITISV_043102 [Vitis vinifera] Length = 575 Score = 42.4 bits (98), Expect(2) = 3e-06 Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +2 Query: 116 YVERVLEEFNMKNVKAIVMPLVGHSKLNK-LCPTNKEEKDAMTNISYSSS 262 Y ++VL FNM K I PL H KL+K P +EE+D M+ + Y+S+ Sbjct: 313 YAKKVLNRFNMNEAKPISTPLGSHFKLSKEQSPKTEEERDHMSKVPYASA 362 Score = 35.4 bits (80), Expect(2) = 3e-06 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 8/53 (15%) Frame = +3 Query: 3 GFSRTSVDQCDYFRKFSDGNFIILLFYVDEEV--------VVITRDMLNGCLK 137 GF R D C YF+ F + I+LL++ +++ + I RD NG LK Sbjct: 255 GFKRCEADHCCYFKSFDNSYIILLLYFAMKDLGAAKQILGMRIIRDKANGTLK 307 >emb|CAN60145.1| hypothetical protein VITISV_019412 [Vitis vinifera] Length = 1227 Score = 42.7 bits (99), Expect(2) = 6e-06 Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +2 Query: 116 YVERVLEEFNMKNVKAIVMPLVGHSKLNK-LCPTNKEEKDAMTNISYSSS 262 YV++VL FNM K + PL H KL+K P EE+D M+ + Y+S+ Sbjct: 965 YVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTXEERDHMSKVPYASA 1014 Score = 33.9 bits (76), Expect(2) = 6e-06 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +3 Query: 3 GFSRTSVDQCDYFRKFSDGNFIILLFYVDEEVV 101 GF R D C Y + F D ++IILL YVD+ ++ Sbjct: 899 GFKRCEXDHCCYXKSF-DNSYIILLLYVDDMLI 930 >emb|CAN63575.1| hypothetical protein VITISV_003796 [Vitis vinifera] Length = 1305 Score = 46.2 bits (108), Expect(2) = 1e-05 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%) Frame = +2 Query: 110 KRYVERVLEEFNMKNVKAIVMPLVGHSKLNKL-CPTNKEEKDAMTNISYSS 259 + Y+E++L+ FNM N K+ P+V K +K CP N +E++ M I YSS Sbjct: 922 RAYIEKILKRFNMHNCKSTKAPIVKGDKFSKAQCPQNDDEREXMRTIXYSS 972 Score = 29.6 bits (65), Expect(2) = 1e-05 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 8/49 (16%) Frame = +3 Query: 3 GFSRTSVDQCDYFRKFSDGNFIILLFYVDE--------EVVVITRDMLN 125 GF +VD+C Y R S ++I L+ YVD+ ++++ T+ ML+ Sbjct: 842 GFKENTVDRCIYLR-VSGSSYIFLVLYVDDILLASNDSDLLIETKHMLS 889