BLASTX nr result

ID: Cornus23_contig00032430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00032430
         (362 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CEO96512.1| hypothetical protein PBRA_005121, partial [Plasm...    77   5e-12

>emb|CEO96512.1| hypothetical protein PBRA_005121, partial [Plasmodiophora
           brassicae]
          Length = 793

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
 Frame = -2

Query: 358 LFAAIASGEIADFPKHMSVXXXXXXXXXXXXXXESVLDTVMHSHEYRNALVFCEGKLKEC 179
           LF AI++GEI +FPK++ V               SV DTV+ SH +R  L+     +K  
Sbjct: 184 LFNAISAGEIREFPKYLHVHHMKELEHNPAADAVSVFDTVLCSHPFRRVLLAMIPHVKSL 243

Query: 178 IEKE--TDETKLKALKDNLNYVMQQKATVHGDHEVALKNAVGMLRVLGFDEIGEKAPLSS 5
           IE E      +L  LK+NL Y+ +Q  TV G +    +    MLRVLGFD++GE+A LSS
Sbjct: 244 IEAENGVKSERLDNLKENLAYLEKQFQTVDGGN--GEERVKSMLRVLGFDDVGERATLSS 301

Query: 4   L 2
           L
Sbjct: 302 L 302


Top