BLASTX nr result

ID: Cornus23_contig00032176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00032176
         (522 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010652238.1| PREDICTED: bromodomain and WD repeat-contain...   115   1e-23
ref|XP_010087245.1| PH-interacting protein [Morus notabilis] gi|...    67   4e-09

>ref|XP_010652238.1| PREDICTED: bromodomain and WD repeat-containing protein 3 [Vitis
            vinifera] gi|731395647|ref|XP_010652239.1| PREDICTED:
            bromodomain and WD repeat-containing protein 3 [Vitis
            vinifera]
          Length = 1763

 Score =  115 bits (289), Expect = 1e-23
 Identities = 79/178 (44%), Positives = 100/178 (56%), Gaps = 5/178 (2%)
 Frame = -2

Query: 521  VKVRTSKQM*SEDLKTTDASTGFNGSFDGHYGNSNDVNDFVKPGIGYGDSFSCSEIQNHG 342
            VK R+SK+  S D   +DA TGF+ SFD H GN  D+N   KP  G G+S S SEIQNH 
Sbjct: 1086 VKARSSKRFRSGDFVASDACTGFDVSFDVHNGNGKDINGQTKPENGCGNS-SPSEIQNHA 1144

Query: 341  GKVLTEAYKNKEHFETGALADMDSARSEEFTPGCAVQSSLWKFSPLDDLQQTGSPSAASH 162
            G++L +  ++ E F TG     D   +E   PG A +SS ++   L D  Q    SA S 
Sbjct: 1145 GELLEKLGRDVEPFGTGLENKDDVKNNELAPPGEANKSSSFQGLSLLDDHQKIDASAISS 1204

Query: 161  HENLNKGYKDCSGSDMCRGYDLL-----VSTNLSHELKENSPPKPTKLRITSKKILQD 3
            + NLNK +K  SGSD  R  D L     V  N SH+LK N P    KLRI SK+I++D
Sbjct: 1205 NGNLNKQHKGWSGSDEFRDCDSLEMDETVGINHSHDLKGNPPANSLKLRIRSKRIVRD 1262


>ref|XP_010087245.1| PH-interacting protein [Morus notabilis] gi|587837855|gb|EXB28595.1|
            PH-interacting protein [Morus notabilis]
          Length = 1727

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 5/178 (2%)
 Frame = -2

Query: 521  VKVRTSKQM*SEDLKTTDASTGFNGSFDGHYGNSNDVNDFVKPGIGYGDSFSCSEIQNHG 342
            VK+RTS+   S D+   DAS+G + S D H    N VN+ V P    G   +   IQ HG
Sbjct: 1089 VKIRTSRHSRSGDILLLDASSGLDASADDHMEKRNSVNENVTPESMKGRPCASLSIQKHG 1148

Query: 341  GKVLTEAYKNKEHFETGALADMDSARSEEFTPGCAVQSSLWKFSPLDDLQQTGSPSAASH 162
               L    K++E FET A  ++++ +         V+SSL     ++D  + G  +AA+ 
Sbjct: 1149 SVSLC---KDEEQFETNASENLNTDKG-------LVESSL----VVEDKVKFG-VAAATF 1193

Query: 161  HENLNKGYKDCSG----SDMCRGYDLLVSTNLSHELKENSPPKPTKLRITSK-KILQD 3
            +ENL+KG +  S     +D          +N  HE +EN+P  PTK++I +K +IL D
Sbjct: 1194 NENLDKGCERPSTYDKYTDDASETSGFARSNHYHE-QENAPHNPTKIKIKTKTRILAD 1250


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