BLASTX nr result

ID: Cornus23_contig00032104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00032104
         (328 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010093466.1| putative leucine-rich repeat receptor-like s...    58   3e-06
ref|XP_010093467.1| hypothetical protein L484_017528 [Morus nota...    57   5e-06

>ref|XP_010093466.1| putative leucine-rich repeat receptor-like serine/threonine-protein
           kinase [Morus notabilis] gi|587864436|gb|EXB54090.1|
           putative leucine-rich repeat receptor-like
           serine/threonine-protein kinase [Morus notabilis]
          Length = 405

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = -3

Query: 233 NGMKPFGVKSKSKTVRAQAQSGQYHTMWWRGLLQFASK 120
           NGM+PFGV+ KSKTVR QAQSGQYHT W  G L   S+
Sbjct: 6   NGMRPFGVRPKSKTVRTQAQSGQYHTRWGCGSLHIVSE 43


>ref|XP_010093467.1| hypothetical protein L484_017528 [Morus notabilis]
           gi|587864437|gb|EXB54091.1| hypothetical protein
           L484_017528 [Morus notabilis]
          Length = 772

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = -2

Query: 324 CERYWANY-RLYNPILLGCE-REWTIYVGSISKWYEAFWGKIQEQNRASSGPKRTISYHV 151
           C   W N  RL +P   G E R W I   +  +W+E+FWG+ Q+QNRA SGPKRTISY V
Sbjct: 687 CTPTWYNIVRLTSP---GDEDRSWFIRNDTTYQWFESFWGETQKQNRAGSGPKRTISYQV 743

Query: 150 VEGAVT 133
               VT
Sbjct: 744 GVWVVT 749


Top