BLASTX nr result

ID: Cornus23_contig00032032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00032032
         (390 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012479008.1| PREDICTED: mediator of RNA polymerase II tra...   136   7e-30
ref|XP_010271303.1| PREDICTED: mediator of RNA polymerase II tra...   134   3e-29
ref|XP_010271302.1| PREDICTED: mediator of RNA polymerase II tra...   134   3e-29
ref|XP_012479007.1| PREDICTED: mediator of RNA polymerase II tra...   131   2e-28
gb|KHG26882.1| Mediator of RNA polymerase II transcription subun...   131   2e-28
ref|XP_012072284.1| PREDICTED: mediator of RNA polymerase II tra...   130   3e-28
ref|XP_012072283.1| PREDICTED: mediator of RNA polymerase II tra...   130   3e-28
ref|XP_008221447.1| PREDICTED: mediator of RNA polymerase II tra...   129   9e-28
ref|XP_008221446.1| PREDICTED: mediator of RNA polymerase II tra...   129   9e-28
ref|XP_007225475.1| hypothetical protein PRUPE_ppa000154mg [Prun...   129   9e-28
ref|XP_009351538.1| PREDICTED: mediator of RNA polymerase II tra...   127   3e-27
gb|KDO64563.1| hypothetical protein CISIN_1g000338mg [Citrus sin...   127   3e-27
gb|KDO64558.1| hypothetical protein CISIN_1g000338mg [Citrus sin...   127   3e-27
gb|KDO64557.1| hypothetical protein CISIN_1g000338mg [Citrus sin...   127   3e-27
ref|XP_006469230.1| PREDICTED: mediator of RNA polymerase II tra...   127   3e-27
ref|XP_006448190.1| hypothetical protein CICLE_v10014030mg [Citr...   127   3e-27
emb|CDP00830.1| unnamed protein product [Coffea canephora]            126   6e-27
ref|XP_008366986.1| PREDICTED: mediator of RNA polymerase II tra...   126   6e-27
ref|XP_008360133.1| PREDICTED: mediator of RNA polymerase II tra...   126   6e-27
ref|XP_010110607.1| hypothetical protein L484_003995 [Morus nota...   126   7e-27

>ref|XP_012479008.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
           isoform X2 [Gossypium raimondii]
           gi|763763510|gb|KJB30764.1| hypothetical protein
           B456_005G158900 [Gossypium raimondii]
          Length = 1602

 Score =  136 bits (342), Expect = 7e-30
 Identities = 67/84 (79%), Positives = 73/84 (86%), Gaps = 6/84 (7%)
 Frame = -3

Query: 253 MDQTQRA------SRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTAL 92
           MDQTQR+      SRT+QFHPAR AI DLFNLYLGRN+RQK +DS+REPPNKTQKRV AL
Sbjct: 1   MDQTQRSVAAAANSRTYQFHPARAAITDLFNLYLGRNSRQKADDSVREPPNKTQKRVLAL 60

Query: 91  NRELPPRNEQFLLDFEQLQSQFAD 20
           NRELPPRNEQFLLDFEQLQ+QF D
Sbjct: 61  NRELPPRNEQFLLDFEQLQTQFGD 84


>ref|XP_010271303.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
           isoform X2 [Nelumbo nucifera]
          Length = 1602

 Score =  134 bits (337), Expect = 3e-29
 Identities = 63/78 (80%), Positives = 70/78 (89%)
 Frame = -3

Query: 253 MDQTQRASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPP 74
           MDQ QR  R +QFHPAR AIIDLFNLYLGR++RQK+E+ IREPPNKTQKRVTALNR+LPP
Sbjct: 1   MDQNQRTPRPYQFHPARTAIIDLFNLYLGRSSRQKSEEPIREPPNKTQKRVTALNRDLPP 60

Query: 73  RNEQFLLDFEQLQSQFAD 20
           RNEQF+LDFEQLQ QF D
Sbjct: 61  RNEQFILDFEQLQGQFPD 78


>ref|XP_010271302.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
           isoform X1 [Nelumbo nucifera]
          Length = 1614

 Score =  134 bits (337), Expect = 3e-29
 Identities = 63/78 (80%), Positives = 70/78 (89%)
 Frame = -3

Query: 253 MDQTQRASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPP 74
           MDQ QR  R +QFHPAR AIIDLFNLYLGR++RQK+E+ IREPPNKTQKRVTALNR+LPP
Sbjct: 1   MDQNQRTPRPYQFHPARTAIIDLFNLYLGRSSRQKSEEPIREPPNKTQKRVTALNRDLPP 60

Query: 73  RNEQFLLDFEQLQSQFAD 20
           RNEQF+LDFEQLQ QF D
Sbjct: 61  RNEQFILDFEQLQGQFPD 78


>ref|XP_012479007.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
           isoform X1 [Gossypium raimondii]
           gi|763763509|gb|KJB30763.1| hypothetical protein
           B456_005G158900 [Gossypium raimondii]
          Length = 1603

 Score =  131 bits (330), Expect = 2e-28
 Identities = 67/85 (78%), Positives = 73/85 (85%), Gaps = 7/85 (8%)
 Frame = -3

Query: 253 MDQTQRA------SRTFQFHPARPAIIDLFNLYLG-RNARQKTEDSIREPPNKTQKRVTA 95
           MDQTQR+      SRT+QFHPAR AI DLFNLYLG RN+RQK +DS+REPPNKTQKRV A
Sbjct: 1   MDQTQRSVAAAANSRTYQFHPARAAITDLFNLYLGVRNSRQKADDSVREPPNKTQKRVLA 60

Query: 94  LNRELPPRNEQFLLDFEQLQSQFAD 20
           LNRELPPRNEQFLLDFEQLQ+QF D
Sbjct: 61  LNRELPPRNEQFLLDFEQLQTQFGD 85


>gb|KHG26882.1| Mediator of RNA polymerase II transcription subunit 23 [Gossypium
           arboreum] gi|728847665|gb|KHG27108.1| Mediator of RNA
           polymerase II transcription subunit 23 [Gossypium
           arboreum]
          Length = 1578

 Score =  131 bits (330), Expect = 2e-28
 Identities = 67/85 (78%), Positives = 73/85 (85%), Gaps = 7/85 (8%)
 Frame = -3

Query: 253 MDQTQRA------SRTFQFHPARPAIIDLFNLYLG-RNARQKTEDSIREPPNKTQKRVTA 95
           MDQTQR+      SRT+QFHPAR AI DLFNLYLG RN+RQK +DS+REPPNKTQKRV A
Sbjct: 1   MDQTQRSVAAAANSRTYQFHPARAAITDLFNLYLGVRNSRQKADDSVREPPNKTQKRVLA 60

Query: 94  LNRELPPRNEQFLLDFEQLQSQFAD 20
           LNRELPPRNEQFLLDFEQLQ+QF D
Sbjct: 61  LNRELPPRNEQFLLDFEQLQTQFGD 85


>ref|XP_012072284.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
           isoform X2 [Jatropha curcas]
          Length = 1609

 Score =  130 bits (328), Expect = 3e-28
 Identities = 66/85 (77%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
 Frame = -3

Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
           MDQ+QR       ASR +QFHPAR AIIDLFN+YLGR++RQK +DS REPPNKTQKRV A
Sbjct: 1   MDQSQRSIASAAAASRGYQFHPARAAIIDLFNVYLGRSSRQKADDSTREPPNKTQKRVLA 60

Query: 94  LNRELPPRNEQFLLDFEQLQSQFAD 20
           LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61  LNRELPPRNEQFLLDFEQLQSQFPD 85


>ref|XP_012072283.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
           isoform X1 [Jatropha curcas]
          Length = 1630

 Score =  130 bits (328), Expect = 3e-28
 Identities = 66/85 (77%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
 Frame = -3

Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
           MDQ+QR       ASR +QFHPAR AIIDLFN+YLGR++RQK +DS REPPNKTQKRV A
Sbjct: 1   MDQSQRSIASAAAASRGYQFHPARAAIIDLFNVYLGRSSRQKADDSTREPPNKTQKRVLA 60

Query: 94  LNRELPPRNEQFLLDFEQLQSQFAD 20
           LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61  LNRELPPRNEQFLLDFEQLQSQFPD 85


>ref|XP_008221447.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
           isoform X2 [Prunus mume]
          Length = 1577

 Score =  129 bits (324), Expect = 9e-28
 Identities = 64/85 (75%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
 Frame = -3

Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
           MDQ QR       ASR +QFHPAR AI++LF+LYLGR++RQK EDS+REPPNK+QKRV A
Sbjct: 1   MDQNQRSSSSSASASRAYQFHPARAAIVNLFDLYLGRSSRQKPEDSVREPPNKSQKRVVA 60

Query: 94  LNRELPPRNEQFLLDFEQLQSQFAD 20
           LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61  LNRELPPRNEQFLLDFEQLQSQFPD 85


>ref|XP_008221446.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
           isoform X1 [Prunus mume]
          Length = 1603

 Score =  129 bits (324), Expect = 9e-28
 Identities = 64/85 (75%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
 Frame = -3

Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
           MDQ QR       ASR +QFHPAR AI++LF+LYLGR++RQK EDS+REPPNK+QKRV A
Sbjct: 1   MDQNQRSSSSSASASRAYQFHPARAAIVNLFDLYLGRSSRQKPEDSVREPPNKSQKRVVA 60

Query: 94  LNRELPPRNEQFLLDFEQLQSQFAD 20
           LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61  LNRELPPRNEQFLLDFEQLQSQFPD 85


>ref|XP_007225475.1| hypothetical protein PRUPE_ppa000154mg [Prunus persica]
           gi|462422411|gb|EMJ26674.1| hypothetical protein
           PRUPE_ppa000154mg [Prunus persica]
          Length = 1605

 Score =  129 bits (324), Expect = 9e-28
 Identities = 64/85 (75%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
 Frame = -3

Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
           MDQ QR       ASR +QFHPAR AI++LF+LYLGR++RQK EDS+REPPNK+QKRV A
Sbjct: 1   MDQNQRSSSSSASASRAYQFHPARAAIVNLFDLYLGRSSRQKPEDSVREPPNKSQKRVVA 60

Query: 94  LNRELPPRNEQFLLDFEQLQSQFAD 20
           LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61  LNRELPPRNEQFLLDFEQLQSQFPD 85


>ref|XP_009351538.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
           [Pyrus x bretschneideri]
          Length = 1598

 Score =  127 bits (320), Expect = 3e-27
 Identities = 63/85 (74%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
 Frame = -3

Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
           MDQ QR       ASR +QFHPAR AI++LF+LYLGR++RQK +DS+REPPNK+QKRV A
Sbjct: 1   MDQNQRPSSSASAASRAYQFHPARAAIVNLFDLYLGRSSRQKPDDSVREPPNKSQKRVLA 60

Query: 94  LNRELPPRNEQFLLDFEQLQSQFAD 20
           LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61  LNRELPPRNEQFLLDFEQLQSQFPD 85


>gb|KDO64563.1| hypothetical protein CISIN_1g000338mg [Citrus sinensis]
          Length = 1450

 Score =  127 bits (320), Expect = 3e-27
 Identities = 60/72 (83%), Positives = 67/72 (93%)
 Frame = -3

Query: 235 ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPPRNEQFL 56
           +SR +QFHPAR AIIDLFNLYLGR++RQK +DSIR+PPNKTQKRV ALNRELPPRNEQFL
Sbjct: 20  SSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKRVLALNRELPPRNEQFL 79

Query: 55  LDFEQLQSQFAD 20
           +DFEQLQSQF D
Sbjct: 80  IDFEQLQSQFPD 91


>gb|KDO64558.1| hypothetical protein CISIN_1g000338mg [Citrus sinensis]
          Length = 1611

 Score =  127 bits (320), Expect = 3e-27
 Identities = 60/72 (83%), Positives = 67/72 (93%)
 Frame = -3

Query: 235 ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPPRNEQFL 56
           +SR +QFHPAR AIIDLFNLYLGR++RQK +DSIR+PPNKTQKRV ALNRELPPRNEQFL
Sbjct: 20  SSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKRVLALNRELPPRNEQFL 79

Query: 55  LDFEQLQSQFAD 20
           +DFEQLQSQF D
Sbjct: 80  IDFEQLQSQFPD 91


>gb|KDO64557.1| hypothetical protein CISIN_1g000338mg [Citrus sinensis]
          Length = 1563

 Score =  127 bits (320), Expect = 3e-27
 Identities = 60/72 (83%), Positives = 67/72 (93%)
 Frame = -3

Query: 235 ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPPRNEQFL 56
           +SR +QFHPAR AIIDLFNLYLGR++RQK +DSIR+PPNKTQKRV ALNRELPPRNEQFL
Sbjct: 20  SSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKRVLALNRELPPRNEQFL 79

Query: 55  LDFEQLQSQFAD 20
           +DFEQLQSQF D
Sbjct: 80  IDFEQLQSQFPD 91


>ref|XP_006469230.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           23-like isoform X4 [Citrus sinensis]
          Length = 1611

 Score =  127 bits (320), Expect = 3e-27
 Identities = 60/72 (83%), Positives = 67/72 (93%)
 Frame = -3

Query: 235 ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPPRNEQFL 56
           +SR +QFHPAR AIIDLFNLYLGR++RQK +DSIR+PPNKTQKRV ALNRELPPRNEQFL
Sbjct: 20  SSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKRVLALNRELPPRNEQFL 79

Query: 55  LDFEQLQSQFAD 20
           +DFEQLQSQF D
Sbjct: 80  IDFEQLQSQFPD 91


>ref|XP_006448190.1| hypothetical protein CICLE_v10014030mg [Citrus clementina]
           gi|557550801|gb|ESR61430.1| hypothetical protein
           CICLE_v10014030mg [Citrus clementina]
          Length = 1611

 Score =  127 bits (320), Expect = 3e-27
 Identities = 60/72 (83%), Positives = 67/72 (93%)
 Frame = -3

Query: 235 ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPPRNEQFL 56
           +SR +QFHPAR AIIDLFNLYLGR++RQK +DSIR+PPNKTQKRV ALNRELPPRNEQFL
Sbjct: 20  SSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKRVLALNRELPPRNEQFL 79

Query: 55  LDFEQLQSQFAD 20
           +DFEQLQSQF D
Sbjct: 80  IDFEQLQSQFPD 91


>emb|CDP00830.1| unnamed protein product [Coffea canephora]
          Length = 1649

 Score =  126 bits (317), Expect = 6e-27
 Identities = 61/83 (73%), Positives = 69/83 (83%)
 Frame = -3

Query: 268 NPSQ*MDQTQRASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALN 89
           NPS     T   SR  QFHPARPAI+DLFNLYLGR A+QK+++S REPPNKTQKR++ALN
Sbjct: 47  NPSS--SSTSATSRALQFHPARPAILDLFNLYLGRTAQQKSDESAREPPNKTQKRISALN 104

Query: 88  RELPPRNEQFLLDFEQLQSQFAD 20
           R+LPPRNEQFLLDFEQL SQF D
Sbjct: 105 RDLPPRNEQFLLDFEQLLSQFQD 127


>ref|XP_008366986.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           23-like [Malus domestica]
          Length = 1602

 Score =  126 bits (317), Expect = 6e-27
 Identities = 63/85 (74%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
 Frame = -3

Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
           MDQ QR       ASR +QFHPAR AI++LF+LYLGR++RQK++DSIREPPNK+QKRV A
Sbjct: 1   MDQNQRPSSSASAASRAYQFHPARAAIVNLFDLYLGRSSRQKSDDSIREPPNKSQKRVLA 60

Query: 94  LNRELPPRNEQFLLDFEQLQSQFAD 20
           LNRELPPRNEQFLLDFEQLQSQ  D
Sbjct: 61  LNRELPPRNEQFLLDFEQLQSQLPD 85


>ref|XP_008360133.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           23-like [Malus domestica]
          Length = 881

 Score =  126 bits (317), Expect = 6e-27
 Identities = 62/85 (72%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
 Frame = -3

Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
           MDQ QR       A+R +QFHPAR AI++LF+LYLGR++RQK +DS+REPPNK+QKRV A
Sbjct: 1   MDQNQRPSSSASAATRAYQFHPARAAIVNLFDLYLGRSSRQKPDDSVREPPNKSQKRVLA 60

Query: 94  LNRELPPRNEQFLLDFEQLQSQFAD 20
           LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61  LNRELPPRNEQFLLDFEQLQSQFPD 85


>ref|XP_010110607.1| hypothetical protein L484_003995 [Morus notabilis]
           gi|587940387|gb|EXC26998.1| hypothetical protein
           L484_003995 [Morus notabilis]
          Length = 1545

 Score =  126 bits (316), Expect = 7e-27
 Identities = 61/81 (75%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
 Frame = -3

Query: 253 MDQTQR---ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRE 83
           MDQ QR   ASR +QFHP R AII+LF+LYLGR++RQK +D+ REPPNKTQKRV ALNRE
Sbjct: 1   MDQNQRPSSASRAYQFHPGRAAIINLFDLYLGRSSRQKPDDATREPPNKTQKRVIALNRE 60

Query: 82  LPPRNEQFLLDFEQLQSQFAD 20
           LPPRNEQFL+DFEQ+QSQF+D
Sbjct: 61  LPPRNEQFLIDFEQIQSQFSD 81


Top