BLASTX nr result
ID: Cornus23_contig00032032
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00032032
(390 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012479008.1| PREDICTED: mediator of RNA polymerase II tra... 136 7e-30
ref|XP_010271303.1| PREDICTED: mediator of RNA polymerase II tra... 134 3e-29
ref|XP_010271302.1| PREDICTED: mediator of RNA polymerase II tra... 134 3e-29
ref|XP_012479007.1| PREDICTED: mediator of RNA polymerase II tra... 131 2e-28
gb|KHG26882.1| Mediator of RNA polymerase II transcription subun... 131 2e-28
ref|XP_012072284.1| PREDICTED: mediator of RNA polymerase II tra... 130 3e-28
ref|XP_012072283.1| PREDICTED: mediator of RNA polymerase II tra... 130 3e-28
ref|XP_008221447.1| PREDICTED: mediator of RNA polymerase II tra... 129 9e-28
ref|XP_008221446.1| PREDICTED: mediator of RNA polymerase II tra... 129 9e-28
ref|XP_007225475.1| hypothetical protein PRUPE_ppa000154mg [Prun... 129 9e-28
ref|XP_009351538.1| PREDICTED: mediator of RNA polymerase II tra... 127 3e-27
gb|KDO64563.1| hypothetical protein CISIN_1g000338mg [Citrus sin... 127 3e-27
gb|KDO64558.1| hypothetical protein CISIN_1g000338mg [Citrus sin... 127 3e-27
gb|KDO64557.1| hypothetical protein CISIN_1g000338mg [Citrus sin... 127 3e-27
ref|XP_006469230.1| PREDICTED: mediator of RNA polymerase II tra... 127 3e-27
ref|XP_006448190.1| hypothetical protein CICLE_v10014030mg [Citr... 127 3e-27
emb|CDP00830.1| unnamed protein product [Coffea canephora] 126 6e-27
ref|XP_008366986.1| PREDICTED: mediator of RNA polymerase II tra... 126 6e-27
ref|XP_008360133.1| PREDICTED: mediator of RNA polymerase II tra... 126 6e-27
ref|XP_010110607.1| hypothetical protein L484_003995 [Morus nota... 126 7e-27
>ref|XP_012479008.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X2 [Gossypium raimondii]
gi|763763510|gb|KJB30764.1| hypothetical protein
B456_005G158900 [Gossypium raimondii]
Length = 1602
Score = 136 bits (342), Expect = 7e-30
Identities = 67/84 (79%), Positives = 73/84 (86%), Gaps = 6/84 (7%)
Frame = -3
Query: 253 MDQTQRA------SRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTAL 92
MDQTQR+ SRT+QFHPAR AI DLFNLYLGRN+RQK +DS+REPPNKTQKRV AL
Sbjct: 1 MDQTQRSVAAAANSRTYQFHPARAAITDLFNLYLGRNSRQKADDSVREPPNKTQKRVLAL 60
Query: 91 NRELPPRNEQFLLDFEQLQSQFAD 20
NRELPPRNEQFLLDFEQLQ+QF D
Sbjct: 61 NRELPPRNEQFLLDFEQLQTQFGD 84
>ref|XP_010271303.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X2 [Nelumbo nucifera]
Length = 1602
Score = 134 bits (337), Expect = 3e-29
Identities = 63/78 (80%), Positives = 70/78 (89%)
Frame = -3
Query: 253 MDQTQRASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPP 74
MDQ QR R +QFHPAR AIIDLFNLYLGR++RQK+E+ IREPPNKTQKRVTALNR+LPP
Sbjct: 1 MDQNQRTPRPYQFHPARTAIIDLFNLYLGRSSRQKSEEPIREPPNKTQKRVTALNRDLPP 60
Query: 73 RNEQFLLDFEQLQSQFAD 20
RNEQF+LDFEQLQ QF D
Sbjct: 61 RNEQFILDFEQLQGQFPD 78
>ref|XP_010271302.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X1 [Nelumbo nucifera]
Length = 1614
Score = 134 bits (337), Expect = 3e-29
Identities = 63/78 (80%), Positives = 70/78 (89%)
Frame = -3
Query: 253 MDQTQRASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPP 74
MDQ QR R +QFHPAR AIIDLFNLYLGR++RQK+E+ IREPPNKTQKRVTALNR+LPP
Sbjct: 1 MDQNQRTPRPYQFHPARTAIIDLFNLYLGRSSRQKSEEPIREPPNKTQKRVTALNRDLPP 60
Query: 73 RNEQFLLDFEQLQSQFAD 20
RNEQF+LDFEQLQ QF D
Sbjct: 61 RNEQFILDFEQLQGQFPD 78
>ref|XP_012479007.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X1 [Gossypium raimondii]
gi|763763509|gb|KJB30763.1| hypothetical protein
B456_005G158900 [Gossypium raimondii]
Length = 1603
Score = 131 bits (330), Expect = 2e-28
Identities = 67/85 (78%), Positives = 73/85 (85%), Gaps = 7/85 (8%)
Frame = -3
Query: 253 MDQTQRA------SRTFQFHPARPAIIDLFNLYLG-RNARQKTEDSIREPPNKTQKRVTA 95
MDQTQR+ SRT+QFHPAR AI DLFNLYLG RN+RQK +DS+REPPNKTQKRV A
Sbjct: 1 MDQTQRSVAAAANSRTYQFHPARAAITDLFNLYLGVRNSRQKADDSVREPPNKTQKRVLA 60
Query: 94 LNRELPPRNEQFLLDFEQLQSQFAD 20
LNRELPPRNEQFLLDFEQLQ+QF D
Sbjct: 61 LNRELPPRNEQFLLDFEQLQTQFGD 85
>gb|KHG26882.1| Mediator of RNA polymerase II transcription subunit 23 [Gossypium
arboreum] gi|728847665|gb|KHG27108.1| Mediator of RNA
polymerase II transcription subunit 23 [Gossypium
arboreum]
Length = 1578
Score = 131 bits (330), Expect = 2e-28
Identities = 67/85 (78%), Positives = 73/85 (85%), Gaps = 7/85 (8%)
Frame = -3
Query: 253 MDQTQRA------SRTFQFHPARPAIIDLFNLYLG-RNARQKTEDSIREPPNKTQKRVTA 95
MDQTQR+ SRT+QFHPAR AI DLFNLYLG RN+RQK +DS+REPPNKTQKRV A
Sbjct: 1 MDQTQRSVAAAANSRTYQFHPARAAITDLFNLYLGVRNSRQKADDSVREPPNKTQKRVLA 60
Query: 94 LNRELPPRNEQFLLDFEQLQSQFAD 20
LNRELPPRNEQFLLDFEQLQ+QF D
Sbjct: 61 LNRELPPRNEQFLLDFEQLQTQFGD 85
>ref|XP_012072284.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X2 [Jatropha curcas]
Length = 1609
Score = 130 bits (328), Expect = 3e-28
Identities = 66/85 (77%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
Frame = -3
Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
MDQ+QR ASR +QFHPAR AIIDLFN+YLGR++RQK +DS REPPNKTQKRV A
Sbjct: 1 MDQSQRSIASAAAASRGYQFHPARAAIIDLFNVYLGRSSRQKADDSTREPPNKTQKRVLA 60
Query: 94 LNRELPPRNEQFLLDFEQLQSQFAD 20
LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61 LNRELPPRNEQFLLDFEQLQSQFPD 85
>ref|XP_012072283.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X1 [Jatropha curcas]
Length = 1630
Score = 130 bits (328), Expect = 3e-28
Identities = 66/85 (77%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
Frame = -3
Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
MDQ+QR ASR +QFHPAR AIIDLFN+YLGR++RQK +DS REPPNKTQKRV A
Sbjct: 1 MDQSQRSIASAAAASRGYQFHPARAAIIDLFNVYLGRSSRQKADDSTREPPNKTQKRVLA 60
Query: 94 LNRELPPRNEQFLLDFEQLQSQFAD 20
LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61 LNRELPPRNEQFLLDFEQLQSQFPD 85
>ref|XP_008221447.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X2 [Prunus mume]
Length = 1577
Score = 129 bits (324), Expect = 9e-28
Identities = 64/85 (75%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
Frame = -3
Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
MDQ QR ASR +QFHPAR AI++LF+LYLGR++RQK EDS+REPPNK+QKRV A
Sbjct: 1 MDQNQRSSSSSASASRAYQFHPARAAIVNLFDLYLGRSSRQKPEDSVREPPNKSQKRVVA 60
Query: 94 LNRELPPRNEQFLLDFEQLQSQFAD 20
LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61 LNRELPPRNEQFLLDFEQLQSQFPD 85
>ref|XP_008221446.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform X1 [Prunus mume]
Length = 1603
Score = 129 bits (324), Expect = 9e-28
Identities = 64/85 (75%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
Frame = -3
Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
MDQ QR ASR +QFHPAR AI++LF+LYLGR++RQK EDS+REPPNK+QKRV A
Sbjct: 1 MDQNQRSSSSSASASRAYQFHPARAAIVNLFDLYLGRSSRQKPEDSVREPPNKSQKRVVA 60
Query: 94 LNRELPPRNEQFLLDFEQLQSQFAD 20
LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61 LNRELPPRNEQFLLDFEQLQSQFPD 85
>ref|XP_007225475.1| hypothetical protein PRUPE_ppa000154mg [Prunus persica]
gi|462422411|gb|EMJ26674.1| hypothetical protein
PRUPE_ppa000154mg [Prunus persica]
Length = 1605
Score = 129 bits (324), Expect = 9e-28
Identities = 64/85 (75%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
Frame = -3
Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
MDQ QR ASR +QFHPAR AI++LF+LYLGR++RQK EDS+REPPNK+QKRV A
Sbjct: 1 MDQNQRSSSSSASASRAYQFHPARAAIVNLFDLYLGRSSRQKPEDSVREPPNKSQKRVVA 60
Query: 94 LNRELPPRNEQFLLDFEQLQSQFAD 20
LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61 LNRELPPRNEQFLLDFEQLQSQFPD 85
>ref|XP_009351538.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Pyrus x bretschneideri]
Length = 1598
Score = 127 bits (320), Expect = 3e-27
Identities = 63/85 (74%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
Frame = -3
Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
MDQ QR ASR +QFHPAR AI++LF+LYLGR++RQK +DS+REPPNK+QKRV A
Sbjct: 1 MDQNQRPSSSASAASRAYQFHPARAAIVNLFDLYLGRSSRQKPDDSVREPPNKSQKRVLA 60
Query: 94 LNRELPPRNEQFLLDFEQLQSQFAD 20
LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61 LNRELPPRNEQFLLDFEQLQSQFPD 85
>gb|KDO64563.1| hypothetical protein CISIN_1g000338mg [Citrus sinensis]
Length = 1450
Score = 127 bits (320), Expect = 3e-27
Identities = 60/72 (83%), Positives = 67/72 (93%)
Frame = -3
Query: 235 ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPPRNEQFL 56
+SR +QFHPAR AIIDLFNLYLGR++RQK +DSIR+PPNKTQKRV ALNRELPPRNEQFL
Sbjct: 20 SSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKRVLALNRELPPRNEQFL 79
Query: 55 LDFEQLQSQFAD 20
+DFEQLQSQF D
Sbjct: 80 IDFEQLQSQFPD 91
>gb|KDO64558.1| hypothetical protein CISIN_1g000338mg [Citrus sinensis]
Length = 1611
Score = 127 bits (320), Expect = 3e-27
Identities = 60/72 (83%), Positives = 67/72 (93%)
Frame = -3
Query: 235 ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPPRNEQFL 56
+SR +QFHPAR AIIDLFNLYLGR++RQK +DSIR+PPNKTQKRV ALNRELPPRNEQFL
Sbjct: 20 SSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKRVLALNRELPPRNEQFL 79
Query: 55 LDFEQLQSQFAD 20
+DFEQLQSQF D
Sbjct: 80 IDFEQLQSQFPD 91
>gb|KDO64557.1| hypothetical protein CISIN_1g000338mg [Citrus sinensis]
Length = 1563
Score = 127 bits (320), Expect = 3e-27
Identities = 60/72 (83%), Positives = 67/72 (93%)
Frame = -3
Query: 235 ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPPRNEQFL 56
+SR +QFHPAR AIIDLFNLYLGR++RQK +DSIR+PPNKTQKRV ALNRELPPRNEQFL
Sbjct: 20 SSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKRVLALNRELPPRNEQFL 79
Query: 55 LDFEQLQSQFAD 20
+DFEQLQSQF D
Sbjct: 80 IDFEQLQSQFPD 91
>ref|XP_006469230.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like isoform X4 [Citrus sinensis]
Length = 1611
Score = 127 bits (320), Expect = 3e-27
Identities = 60/72 (83%), Positives = 67/72 (93%)
Frame = -3
Query: 235 ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPPRNEQFL 56
+SR +QFHPAR AIIDLFNLYLGR++RQK +DSIR+PPNKTQKRV ALNRELPPRNEQFL
Sbjct: 20 SSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKRVLALNRELPPRNEQFL 79
Query: 55 LDFEQLQSQFAD 20
+DFEQLQSQF D
Sbjct: 80 IDFEQLQSQFPD 91
>ref|XP_006448190.1| hypothetical protein CICLE_v10014030mg [Citrus clementina]
gi|557550801|gb|ESR61430.1| hypothetical protein
CICLE_v10014030mg [Citrus clementina]
Length = 1611
Score = 127 bits (320), Expect = 3e-27
Identities = 60/72 (83%), Positives = 67/72 (93%)
Frame = -3
Query: 235 ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRELPPRNEQFL 56
+SR +QFHPAR AIIDLFNLYLGR++RQK +DSIR+PPNKTQKRV ALNRELPPRNEQFL
Sbjct: 20 SSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKRVLALNRELPPRNEQFL 79
Query: 55 LDFEQLQSQFAD 20
+DFEQLQSQF D
Sbjct: 80 IDFEQLQSQFPD 91
>emb|CDP00830.1| unnamed protein product [Coffea canephora]
Length = 1649
Score = 126 bits (317), Expect = 6e-27
Identities = 61/83 (73%), Positives = 69/83 (83%)
Frame = -3
Query: 268 NPSQ*MDQTQRASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALN 89
NPS T SR QFHPARPAI+DLFNLYLGR A+QK+++S REPPNKTQKR++ALN
Sbjct: 47 NPSS--SSTSATSRALQFHPARPAILDLFNLYLGRTAQQKSDESAREPPNKTQKRISALN 104
Query: 88 RELPPRNEQFLLDFEQLQSQFAD 20
R+LPPRNEQFLLDFEQL SQF D
Sbjct: 105 RDLPPRNEQFLLDFEQLLSQFQD 127
>ref|XP_008366986.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Malus domestica]
Length = 1602
Score = 126 bits (317), Expect = 6e-27
Identities = 63/85 (74%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
Frame = -3
Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
MDQ QR ASR +QFHPAR AI++LF+LYLGR++RQK++DSIREPPNK+QKRV A
Sbjct: 1 MDQNQRPSSSASAASRAYQFHPARAAIVNLFDLYLGRSSRQKSDDSIREPPNKSQKRVLA 60
Query: 94 LNRELPPRNEQFLLDFEQLQSQFAD 20
LNRELPPRNEQFLLDFEQLQSQ D
Sbjct: 61 LNRELPPRNEQFLLDFEQLQSQLPD 85
>ref|XP_008360133.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Malus domestica]
Length = 881
Score = 126 bits (317), Expect = 6e-27
Identities = 62/85 (72%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
Frame = -3
Query: 253 MDQTQR-------ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTA 95
MDQ QR A+R +QFHPAR AI++LF+LYLGR++RQK +DS+REPPNK+QKRV A
Sbjct: 1 MDQNQRPSSSASAATRAYQFHPARAAIVNLFDLYLGRSSRQKPDDSVREPPNKSQKRVLA 60
Query: 94 LNRELPPRNEQFLLDFEQLQSQFAD 20
LNRELPPRNEQFLLDFEQLQSQF D
Sbjct: 61 LNRELPPRNEQFLLDFEQLQSQFPD 85
>ref|XP_010110607.1| hypothetical protein L484_003995 [Morus notabilis]
gi|587940387|gb|EXC26998.1| hypothetical protein
L484_003995 [Morus notabilis]
Length = 1545
Score = 126 bits (316), Expect = 7e-27
Identities = 61/81 (75%), Positives = 71/81 (87%), Gaps = 3/81 (3%)
Frame = -3
Query: 253 MDQTQR---ASRTFQFHPARPAIIDLFNLYLGRNARQKTEDSIREPPNKTQKRVTALNRE 83
MDQ QR ASR +QFHP R AII+LF+LYLGR++RQK +D+ REPPNKTQKRV ALNRE
Sbjct: 1 MDQNQRPSSASRAYQFHPGRAAIINLFDLYLGRSSRQKPDDATREPPNKTQKRVIALNRE 60
Query: 82 LPPRNEQFLLDFEQLQSQFAD 20
LPPRNEQFL+DFEQ+QSQF+D
Sbjct: 61 LPPRNEQFLIDFEQIQSQFSD 81