BLASTX nr result
ID: Cornus23_contig00031723
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00031723
(794 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_013588986.1| PREDICTED: uncharacterized protein LOC106297... 73 1e-24
ref|XP_013658277.1| PREDICTED: uncharacterized protein LOC106363... 68 3e-24
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 63 1e-21
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 67 1e-21
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 67 1e-21
ref|XP_009139674.1| PREDICTED: putative ribonuclease H protein A... 72 5e-21
ref|XP_013671734.1| PREDICTED: uncharacterized protein LOC106376... 67 7e-21
ref|XP_009119465.1| PREDICTED: putative ribonuclease H protein A... 68 9e-21
ref|XP_009139312.1| PREDICTED: putative ribonuclease H protein A... 60 2e-20
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 67 3e-20
ref|XP_009129016.1| PREDICTED: putative ribonuclease H protein A... 67 3e-20
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali... 57 4e-20
ref|XP_009122912.1| PREDICTED: putative ribonuclease H protein A... 67 4e-20
ref|XP_009103574.1| PREDICTED: putative ribonuclease H protein A... 67 4e-20
ref|XP_009139889.1| PREDICTED: putative ribonuclease H protein A... 69 1e-19
ref|XP_013673949.1| PREDICTED: uncharacterized protein LOC106378... 67 4e-19
ref|XP_013700461.1| PREDICTED: uncharacterized protein LOC106404... 64 5e-19
ref|XP_011101577.1| PREDICTED: uncharacterized protein LOC105179... 67 6e-19
ref|XP_013639556.1| PREDICTED: uncharacterized protein LOC106344... 67 6e-19
ref|XP_010430851.1| PREDICTED: uncharacterized protein LOC104715... 63 8e-19
>ref|XP_013588986.1| PREDICTED: uncharacterized protein LOC106297253 [Brassica oleracea
var. oleracea]
Length = 1689
Score = 73.2 bits (178), Expect(3) = 1e-24
Identities = 38/118 (32%), Positives = 62/118 (52%)
Frame = +1
Query: 289 EGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIWK 468
EGGLG+ +L ++ + F+ + VW+F SLWVAW ++ + S W+ ++S S
Sbjct: 1331 EGGLGIRRLEEVQQVFELKRVWNFFSESGSLWVAWLRQNVFDGQSLWTVSTSSSFSSSVN 1390
Query: 469 NMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMNKFHLRMYRDMNLPKNALVAS 642
ML +K + H+ I DG + + D W L++ F R RD+ +P N V+S
Sbjct: 1391 RMLKLKPKLYDHMRCNIGDGKTASFWYDWWTDIGPLLSSFGPRGPRDLRIPVNYTVSS 1448
Score = 55.1 bits (131), Expect(3) = 1e-24
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +2
Query: 35 PLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIILNLEKKM*NFV 214
P +++VS KL+S +LSLAG++ LV VI +W SVF LP ++ +F+
Sbjct: 1248 PFLERVSSKLNSWTVKSLSLAGKITLVSSVIYGMVNFWSSVFSLPKIFYAKVDSMCASFL 1307
Query: 215 WGSFEHNRKLHCLKWDSVCRPHRE 286
W + + + W+++C+P E
Sbjct: 1308 WKNNTTSAAGARVSWENICKPKNE 1331
Score = 33.1 bits (74), Expect(3) = 1e-24
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
Frame = +2
Query: 671 PSASVG-DCYTWKRGGFAF------KQAWNVCRSQSQIAPWYKICW 787
P S G D + W+ G ++F K WNV R +S PW + W
Sbjct: 1478 PEESRGKDIFLWRSGDWSFSKRFSSKAIWNVLRQRSPAVPWCDLVW 1523
>ref|XP_013658277.1| PREDICTED: uncharacterized protein LOC106363011 [Brassica napus]
Length = 1558
Score = 68.2 bits (165), Expect(3) = 3e-24
Identities = 32/94 (34%), Positives = 51/94 (54%)
Frame = +2
Query: 5 TQGLKKGACAPLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIIL 184
T+ + + PL+DK+ +L S + +LS AGRL+L+ VI S +WCSVF LP +
Sbjct: 1114 TKSMTRTDYEPLIDKIRTRLLSWSSRSLSYAGRLQLINTVIVSITNFWCSVFRLPKRCLE 1173
Query: 185 NLEKKM*NFVWGSFEHNRKLHCLKWDSVCRPHRE 286
+E F+W ++ + W+ VC+P E
Sbjct: 1174 TIESMCSAFLWSGSPNSTTRAKVSWEDVCKPKNE 1207
Score = 60.5 bits (145), Expect(3) = 3e-24
Identities = 34/118 (28%), Positives = 54/118 (45%)
Frame = +1
Query: 289 EGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIWK 468
EGGLG+ + D R F L+W L + SLWVAW ++ +W +S S IW+
Sbjct: 1207 EGGLGIRCMADSSRVFALSLIWRLLTNSGSLWVAWTRRNLLRNRCFWDVSDKSSGSWIWR 1266
Query: 469 NMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMNKFHLRMYRDMNLPKNALVAS 642
+L ++ + EI +G + D W L++ + M + + A VAS
Sbjct: 1267 KLLKLRHQAATFLRSEIHNGKDTLFWFDNWLEMGQLIDVVGDSGTQIMGIQRYATVAS 1324
Score = 31.6 bits (70), Expect(3) = 3e-24
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 6/39 (15%)
Frame = +2
Query: 689 DCYTWKRGG------FAFKQAWNVCRSQSQIAPWYKICW 787
DC W+ G F+ K WN R Q W K+ W
Sbjct: 1361 DCLLWRHGENDYKAWFSSKNTWNQIRRQGNTVEWSKLIW 1399
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 63.2 bits (152), Expect(3) = 1e-21
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = +1
Query: 286 REGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSC-LQAASHSHI 462
+EGGLGL L + + +L+W L +DSLWV W + + S+WS + S I
Sbjct: 591 KEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWI 650
Query: 463 WKNMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMNKFHLRMYRDMNLPKNALVA 639
W+ +L +++ E+++G + + D W L+N R DM + ++ +A
Sbjct: 651 WRRLLKHREVAKSFCKIEVNNGVNTSFWFDNWSEKGPLINLTGARGAIDMGISRHMTLA 709
Score = 61.2 bits (147), Expect(3) = 1e-21
Identities = 29/95 (30%), Positives = 48/95 (50%)
Frame = +2
Query: 2 ITQGLKKGACAPLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASII 181
+T+ L +PL+D++ R++ LS AGRL L+ V+ S +W + F LP I
Sbjct: 498 VTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMNAFRLPRECI 557
Query: 182 LNLEKKM*NFVWGSFEHNRKLHCLKWDSVCRPHRE 286
+ + +W E N K + WD +C+P +E
Sbjct: 558 NEINRISSALLWSGPELNPKKAKVSWDEICKPKKE 592
Score = 26.6 bits (57), Expect(3) = 1e-21
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Frame = +2
Query: 668 HPSASVGDCYTWK------RGGFAFKQAWNVCRSQSQIAPWYKICW 787
H + + D W+ + F+ K WN R+ S W+K W
Sbjct: 738 HRNIELEDAILWRGKEDVFKARFSTKDTWNHIRTSSNQRAWHKGVW 783
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 67.4 bits (163), Expect(2) = 1e-21
Identities = 36/95 (37%), Positives = 53/95 (55%)
Frame = +2
Query: 2 ITQGLKKGACAPLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASII 181
+T+ + +PL+DKV K+SS +LS AGRL L+ VI S + +W S + LPA I
Sbjct: 919 LTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCI 978
Query: 182 LNLEKKM*NFVWGSFEHNRKLHCLKWDSVCRPHRE 286
+EK F+W E N K + W S+C+ +E
Sbjct: 979 KEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQE 1013
Score = 63.5 bits (153), Expect(2) = 1e-21
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +1
Query: 286 REGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAAS-HSHI 462
+EGGLG+ LL+ + +L+W + + SLWV W S+WS +S S +
Sbjct: 1012 QEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWM 1071
Query: 463 WKNMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMNKFHLRMYRDMNLPKNALVAS 642
WK +L +D+ EI G S + D W L++ + R DM +P A VA+
Sbjct: 1072 WKKLLNYRDVAKSMCKVEIKSGSSTSFWYDNWSQLRQLVDVTNARRTIDMGIPLAATVAT 1131
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 67.4 bits (163), Expect(2) = 1e-21
Identities = 36/95 (37%), Positives = 53/95 (55%)
Frame = +2
Query: 2 ITQGLKKGACAPLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASII 181
+T+ + +PL+DKV K+SS +LS AGRL L+ VI S + +W S + LPA I
Sbjct: 350 LTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCI 409
Query: 182 LNLEKKM*NFVWGSFEHNRKLHCLKWDSVCRPHRE 286
+EK F+W E N K + W S+C+ +E
Sbjct: 410 KEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQE 444
Score = 63.5 bits (153), Expect(2) = 1e-21
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +1
Query: 286 REGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAAS-HSHI 462
+EGGLG+ LL+ + +L+W + + SLWV W S+WS +S S +
Sbjct: 443 QEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWM 502
Query: 463 WKNMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMNKFHLRMYRDMNLPKNALVAS 642
WK +L +D+ EI G S + D W L++ + R DM +P A VA+
Sbjct: 503 WKKLLKYRDVAKSMCKVEIKSGSSTSFWYDNWSQLGQLVDVTNARRTIDMGIPLAATVAT 562
>ref|XP_009139674.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 499
Score = 72.4 bits (176), Expect(2) = 5e-21
Identities = 32/90 (35%), Positives = 49/90 (54%)
Frame = +1
Query: 289 EGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIWK 468
EGGLG+ KL D +AF +L+W DSLWV+W + + S+W + S IW+
Sbjct: 147 EGGLGVRKLRDSSKAFALKLIWRLFTQPDSLWVSWVRHYLLKYHSFWDVRDDSKGSWIWR 206
Query: 469 NMLTMKDIMLRHINFEISDGCSIKLFTDPW 558
+L ++DI ++ +I DG S + D W
Sbjct: 207 KLLKLRDIAYHYLRVDIRDGRSCHFWFDDW 236
Score = 56.6 bits (135), Expect(2) = 5e-21
Identities = 30/94 (31%), Positives = 46/94 (48%)
Frame = +2
Query: 5 TQGLKKGACAPLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIIL 184
T+ L PL++K+ ++ + LS AGRL+L++ VISS +W S F LPA +
Sbjct: 54 TKALTPHDYEPLIEKIRGRMLCWSNKALSFAGRLQLIQSVISSTVNFWSSAFILPAKCLD 113
Query: 185 NLEKKM*NFVWGSFEHNRKLHCLKWDSVCRPHRE 286
+E F+W + W+ VC P E
Sbjct: 114 TIESMCSAFLWSGSPTQTHKAKVSWEEVCYPKEE 147
>ref|XP_013671734.1| PREDICTED: uncharacterized protein LOC106376215 [Brassica napus]
Length = 389
Score = 67.0 bits (162), Expect(2) = 7e-21
Identities = 30/90 (33%), Positives = 46/90 (51%)
Frame = +1
Query: 289 EGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIWK 468
EGGLG+ +L D +R F L+W F DSLWV+W Q S+W + + S IW+
Sbjct: 100 EGGLGIRRLQDTVRVFAHSLIWQFFNMSDSLWVSWVQHYLLHHISFWDVREETTGSWIWR 159
Query: 469 NMLTMKDIMLRHINFEISDGCSIKLFTDPW 558
+L + + + I E+ +G + D W
Sbjct: 160 KLLKLCPLAYQFIRVEVGNGEKAFFWHDDW 189
Score = 61.6 bits (148), Expect(2) = 7e-21
Identities = 31/94 (32%), Positives = 47/94 (50%)
Frame = +2
Query: 5 TQGLKKGACAPLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIIL 184
T+ L K P +DK+ ++ S +LS AGR +L+ VISS +W S F LP + +
Sbjct: 7 TKALSKEDYEPFIDKIRTRMLSWTNKSLSYAGRSQLLNSVISSIVSFWSSAFILPMACLD 66
Query: 185 NLEKKM*NFVWGSFEHNRKLHCLKWDSVCRPHRE 286
+E F+W H +KW+ +C P E
Sbjct: 67 TIESLCSAFIWAGDPHQTHKAKVKWEDLCYPKSE 100
>ref|XP_009119465.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 444
Score = 67.8 bits (164), Expect(2) = 9e-21
Identities = 26/91 (28%), Positives = 48/91 (52%)
Frame = +1
Query: 286 REGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIW 465
+EGGLG+ + D+ + F +L+W L SLWV W +K S+W S +W
Sbjct: 90 KEGGLGIRSIADVSKVFSLKLIWRLLSESHSLWVDWMKKYILRNESFWDVRDTGLGSWVW 149
Query: 466 KNMLTMKDIMLRHINFEISDGCSIKLFTDPW 558
+ +L ++ + ++ E+ +G + + +TD W
Sbjct: 150 RKLLKLRHLAKEFVHIEVHNGQTARFWTDLW 180
Score = 60.5 bits (145), Expect(2) = 9e-21
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +2
Query: 35 PLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIILNLEKKM*NFV 214
PL+ K+ + S LS AGRL L+K VI+S +WCS F LP + + +++ F+
Sbjct: 8 PLLSKIKGRFQSWTSKTLSFAGRLMLIKSVIASTTNFWCSAFCLPKACMEDIDSLCSAFL 67
Query: 215 WGSFEHNRKLHCLKWDSVCRPHRE 286
W ++ + W VC+P +E
Sbjct: 68 WSGSPNDSSKAKVSWTEVCKPFKE 91
>ref|XP_009139312.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 505
Score = 60.1 bits (144), Expect(3) = 2e-20
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Frame = +1
Query: 289 EGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQ-AASHSHIW 465
EG LGL L D+ R +L W L ++ SLWV W K SYWS + +A S +W
Sbjct: 201 EGVLGLKNLSDVNRVTCLKLTWRILSARSSLWVKWIWKYLIRKGSYWSVNERSALGSWMW 260
Query: 466 KNMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMNKFHLRMYRDMNLPKNALV 636
K +L ++ + + E+ G S + D W L++ R ++ +P N+ V
Sbjct: 261 KKLLKLRPLARQMWRKEVKSGASTSFWFDRWSPLGNLIDLTEGRGTMELGIPINSSV 317
Score = 54.7 bits (130), Expect(3) = 2e-20
Identities = 29/94 (30%), Positives = 49/94 (52%)
Frame = +2
Query: 32 APLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIILNLEKKM*NF 211
+PL+ ++ +SS +LS AGRL+L+ V+ S + +W S F LP I + F
Sbjct: 117 SPLISRIRNMISSWTARHLSFAGRLQLIGSVLYSISNFWMSAFRLPKKCIQEINSICSAF 176
Query: 212 VWGSFEHNRKLHCLKWDSVCRPHREEKVVLGFVN 313
+W + + + W VC+P +++ VLG N
Sbjct: 177 LWSGSVLSTQKAKIAWVDVCKP--KDEGVLGLKN 208
Score = 32.0 bits (71), Expect(3) = 2e-20
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
Frame = +2
Query: 683 VGDCYTWKRG------GFAFKQAWNVCRSQSQIAPWYKICW 787
+ D WKR GF+ Q WN+ R S WYK W
Sbjct: 352 IEDICLWKRENGEYREGFSSSQTWNIIRVHSPNVSWYKGVW 392
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 67.4 bits (163), Expect(2) = 3e-20
Identities = 35/95 (36%), Positives = 52/95 (54%)
Frame = +2
Query: 2 ITQGLKKGACAPLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASII 181
+T+ + +PL++ V K+SS +LS AGRL L+ VI S A +W S + LPA I
Sbjct: 1074 LTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCI 1133
Query: 182 LNLEKKM*NFVWGSFEHNRKLHCLKWDSVCRPHRE 286
+EK F+W N K + W S+C+P +E
Sbjct: 1134 REIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKE 1168
Score = 58.9 bits (141), Expect(2) = 3e-20
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +1
Query: 286 REGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAAS-HSHI 462
+EGGLG+ L + + +L+W L ++ SLWV W ++WS + +S S +
Sbjct: 1167 KEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANERSSLGSWM 1226
Query: 463 WKNMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMNKFHLRMYRDMNLP 621
WK +L +++ E+ +G S + D W H L++ R D+ +P
Sbjct: 1227 WKKLLKYRELAKSMHKVEVRNGSSTSFWYDHWSHLGRLLDITGTRRVIDLGIP 1279
>ref|XP_009129016.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 515
Score = 67.4 bits (163), Expect(2) = 3e-20
Identities = 31/84 (36%), Positives = 46/84 (54%)
Frame = +2
Query: 35 PLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIILNLEKKM*NFV 214
PL+DK+ +L S + +LS GRL+L+ VI S +WCSVF LP + +E+ F+
Sbjct: 81 PLIDKIRTRLLSWSSKSLSYEGRLQLINFVIMSITNFWCSVFKLPERCLEEIERMCSGFL 140
Query: 215 WGSFEHNRKLHCLKWDSVCRPHRE 286
W + + WD VC+P E
Sbjct: 141 WSGTPTSNTQAKVAWDDVCKPKSE 164
Score = 58.9 bits (141), Expect(2) = 3e-20
Identities = 32/118 (27%), Positives = 55/118 (46%)
Frame = +1
Query: 289 EGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIWK 468
EGGLG+ +L D R F L+W L + SLWVAW + +W + S IW+
Sbjct: 164 EGGLGIRRLADSSRVFALSLIWRLLTNSGSLWVAWTRANLLRRCCFWDVSDRYAGSWIWR 223
Query: 469 NMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMNKFHLRMYRDMNLPKNALVAS 642
+L ++ + + EI + + + D W + L++ R + + + A VA+
Sbjct: 224 KLLKLRGQAMAFLRSEIVNSNNTLFWFDNWLNMGRLLDVAGDSGRRTLGITRYATVAN 281
>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 57.4 bits (137), Expect(3) = 4e-20
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +1
Query: 289 EGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAAS-HSHIW 465
EGGLGL L + +L+W + DSLWV W Q + +W+ + S S +W
Sbjct: 201 EGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVFFWAVRENTSLGSWMW 260
Query: 466 KNMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMNKFHLRMYRDMNLPKNALV 636
+ +L +DI EI++G + D W L+ R D+ + K+A V
Sbjct: 261 RKILKFRDIARTLCKVEINNGAQTSFWYDDWSDLGRLIESAGDRGAIDLGINKHATV 317
Score = 55.8 bits (133), Expect(3) = 4e-20
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +2
Query: 35 PLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIILNLEKKM*NFV 214
PL+D + +K+ S + LS GRL L+ ++ S +W F LP I ++K ++
Sbjct: 118 PLIDHIKQKICSWSARFLSYTGRLNLISSILWSICNFWMGAFRLPRDCIREIDKMCSAYL 177
Query: 215 WGSFEHNRKLHCLKWDSVCRPHRE 286
W E N + W VC+P E
Sbjct: 178 WSGGELNTSKAKIAWAFVCKPKEE 201
Score = 32.7 bits (73), Expect(3) = 4e-20
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
Frame = +2
Query: 656 NWNVHPSASVGDCYTWK------RGGFAFKQAWNVCRSQSQIAPWYKICW 787
+WN A DC WK R F+ K WN R+ S WYK W
Sbjct: 344 SWNSRNQAE--DCALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVW 391
>ref|XP_009122912.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 660
Score = 66.6 bits (161), Expect(2) = 4e-20
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +2
Query: 35 PLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIILNLEKKM*NFV 214
PL+DKV +++SS +LS AGRL+L++ VI S +W +VF LP + LE+ F+
Sbjct: 211 PLLDKVRQRISSWTARHLSFAGRLQLLQSVIYSIINFWAAVFPLPQGCLEELERMCNAFL 270
Query: 215 WGSFEHNRKLHCLKWDSVCRP 277
W ++ K + WDSVC P
Sbjct: 271 WSGAPNSAKGAKVSWDSVCTP 291
Score = 59.3 bits (142), Expect(2) = 4e-20
Identities = 28/97 (28%), Positives = 46/97 (47%)
Frame = +1
Query: 292 GGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIWKN 471
GGLGL +L+ + + +L+W DSLWVAW + E +W A S IW+N
Sbjct: 295 GGLGLKRLVGLNELYGVKLIWKLFEGSDSLWVAWIKSHLMEGKMFWVSDFANKGSWIWRN 354
Query: 472 MLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMN 582
++ +++ I + G + D W H L++
Sbjct: 355 LMKLRETARPFILCNVLSGEEASFWHDNWTHNGDLLS 391
>ref|XP_009103574.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 658
Score = 66.6 bits (161), Expect(2) = 4e-20
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +2
Query: 35 PLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIILNLEKKM*NFV 214
PL+DKV +++SS +LS AGRL+L++ VI S +W +VF LP + LE+ F+
Sbjct: 243 PLLDKVRQRISSWTARHLSFAGRLQLLQSVIYSIINFWAAVFPLPQGCLEELERMCNAFL 302
Query: 215 WGSFEHNRKLHCLKWDSVCRP 277
W ++ K + WDSVC P
Sbjct: 303 WSGAPNSAKGAKVSWDSVCTP 323
Score = 59.3 bits (142), Expect(2) = 4e-20
Identities = 28/97 (28%), Positives = 46/97 (47%)
Frame = +1
Query: 292 GGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIWKN 471
GGLGL +L+ + + +L+W DSLWVAW + E +W A S IW+N
Sbjct: 327 GGLGLKRLVGLNELYGVKLIWKLFEGSDSLWVAWIKSHLMEGKMFWVSDFANKGSWIWRN 386
Query: 472 MLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMN 582
++ +++ I + G + D W H L++
Sbjct: 387 LMKLRETARPFILCNVLSGEEASFWHDNWTHNGDLLS 423
>ref|XP_009139889.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 502
Score = 68.6 bits (166), Expect(2) = 1e-19
Identities = 30/98 (30%), Positives = 48/98 (48%)
Frame = +1
Query: 289 EGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIWK 468
EGGLG+ K D +AF +L+W SLWV+W + S+W + S IW+
Sbjct: 150 EGGLGVRKFRDTAKAFALKLIWRLFTQPSSLWVSWVNHYLLKYNSFWDVRDESKGSWIWR 209
Query: 469 NMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMN 582
+L ++D+ + +I DG + + D W L+N
Sbjct: 210 KLLKLRDLAYEFLRVDIKDGKTCYFWFDDWLGKGRLIN 247
Score = 55.8 bits (133), Expect(2) = 1e-19
Identities = 27/84 (32%), Positives = 43/84 (51%)
Frame = +2
Query: 35 PLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIILNLEKKM*NFV 214
PL+DK+ ++ + LS AGRL+L++ VI+S +W S F LPA + +E F+
Sbjct: 67 PLIDKIRSRMLCWSNRALSFAGRLQLIQSVITSMVNFWSSAFILPAKCLDTIESMCSAFL 126
Query: 215 WGSFEHNRKLHCLKWDSVCRPHRE 286
W + W+ +C P E
Sbjct: 127 WSGSPTQTHKAKVSWEDLCAPKDE 150
>ref|XP_013673949.1| PREDICTED: uncharacterized protein LOC106378351 [Brassica napus]
Length = 1669
Score = 67.4 bits (163), Expect(3) = 4e-19
Identities = 34/118 (28%), Positives = 57/118 (48%)
Frame = +1
Query: 286 REGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIW 465
+EGGLGL +L + + F + VW+F SLWVAW YW+ + S
Sbjct: 1311 KEGGLGLRRLEEFQQVFNLKRVWNFFSGSGSLWVAWLHSNVFSRRCYWTTADSQRLSPTV 1370
Query: 466 KNMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMNKFHLRMYRDMNLPKNALVA 639
++M+ +K+ + + I DG + + D W H L+ F R R++ + ++VA
Sbjct: 1371 RSMIRIKETVAEFLRCSIGDGRAASFWYDYWTHMGPLIEGFGQRGPRELRITLESVVA 1428
Score = 48.9 bits (115), Expect(3) = 4e-19
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +2
Query: 35 PLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIILNLEKKM*NFV 214
P +++++ K+ S NLS AG++ +V VI +W SVF LP ++ F+
Sbjct: 1229 PFLERITSKMHSWTVKNLSFAGKVRMVASVIYGMVNFWSSVFALPKRFYEKVDSLCGAFL 1288
Query: 215 WGSFEHNRKLHCLKWDSVCRPHRE 286
W + + + W +C+P +E
Sbjct: 1289 WKNRTSSAAGTRVSWSDICKPKKE 1312
Score = 26.2 bits (56), Expect(3) = 4e-19
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 6/39 (15%)
Frame = +2
Query: 689 DCYTWKRGG------FAFKQAWNVCRSQSQIAPWYKICW 787
D + W+ G F+ K W+ R + WY + W
Sbjct: 1466 DRFLWRNGAGHFVPKFSTKATWHSIRETAPTVEWYSMVW 1504
>ref|XP_013700461.1| PREDICTED: uncharacterized protein LOC106404277 [Brassica napus]
Length = 1050
Score = 63.2 bits (152), Expect(2) = 5e-19
Identities = 26/90 (28%), Positives = 48/90 (53%)
Frame = +1
Query: 289 EGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIWK 468
EGGLG+ ++ D+ F +L+W + SLWV W ++ S+W A S +WK
Sbjct: 643 EGGLGIRRIKDVSAVFDLKLIWCLFNNSTSLWVQWVKQTILRGESFWDARVGAVGSWVWK 702
Query: 469 NMLTMKDIMLRHINFEISDGCSIKLFTDPW 558
+L ++ + + + E+ +G ++ +TD W
Sbjct: 703 KLLQLRPLAKQFLCMEVRNGKTVGFWTDIW 732
Score = 59.3 bits (142), Expect(2) = 5e-19
Identities = 29/94 (30%), Positives = 46/94 (48%)
Frame = +2
Query: 5 TQGLKKGACAPLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIIL 184
T+ + + PL+ K+ + S L+ AGRL+L+ VI+S +WCS F LP I
Sbjct: 550 TKTMSRSDYEPLIAKIRARFLSWTSKALAFAGRLQLINSVIASITNFWCSAFSLPQGCID 609
Query: 185 NLEKKM*NFVWGSFEHNRKLHCLKWDSVCRPHRE 286
+E F+W + + W+ VC+P E
Sbjct: 610 EIESMCSAFLWSGSPNISSKSKVAWEEVCKPKDE 643
Score = 63.9 bits (154), Expect(2) = 1e-11
Identities = 30/117 (25%), Positives = 58/117 (49%)
Frame = +1
Query: 289 EGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIWK 468
EGGLG+ ++ D+ F +L+W + LWV W ++ S+W A S +WK
Sbjct: 754 EGGLGIRRIKDVSVVFDLKLIWRLFNNSSFLWVQWVKQTILRGESFWDARVGAVGSWVWK 813
Query: 469 NMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMNKFHLRMYRDMNLPKNALVA 639
+L ++ + + + E+ +G ++ +TD W L+ R + + + +NA +A
Sbjct: 814 KLLQLRPLAKQFLCMEVRNGKTVGFWTDIWLPIGRLIEVIGERGTQKLGIVRNAKIA 870
Score = 33.5 bits (75), Expect(2) = 1e-11
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +2
Query: 680 SVGDCYTWKRGG------FAFKQAWNVCRSQSQIAPWYKICW 787
+V D WKRG F+ + WN+ R Q+ PW K+ W
Sbjct: 905 NVDDGVKWKRGDVEYGSEFSAYRTWNMVRGQNTKVPWAKLIW 946
>ref|XP_011101577.1| PREDICTED: uncharacterized protein LOC105179637 [Sesamum indicum]
Length = 1189
Score = 67.4 bits (163), Expect(2) = 6e-19
Identities = 32/95 (33%), Positives = 53/95 (55%)
Frame = +2
Query: 2 ITQGLKKGACAPLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASII 181
I+ L C PL+ K+ +++ GL LS AGR++++K V+ + A YW S F LP +I
Sbjct: 877 ISSRLSIADCQPLLSKIDTRINGWEGLALSYAGRVQIIKSVLVAMAVYWASAFILPKGVI 936
Query: 182 LNLEKKM*NFVWGSFEHNRKLHCLKWDSVCRPHRE 286
++EK++ F+W N + W +C+P E
Sbjct: 937 KDIEKRLRAFLWRG-TGNSGYPKVAWKEICKPKEE 970
Score = 54.7 bits (130), Expect(2) = 6e-19
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +1
Query: 289 EGGLGLCKLLDIIRAFKCRLVWDFL-ISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIW 465
EGGLGL + + RA C+ + + + + S+WV W + S W+ L+ W
Sbjct: 970 EGGLGLKDMGTLNRALMCKKLCEVIRCDRTSIWVEWLRHGRLRDDSIWTILENRGPWG-W 1028
Query: 466 KNMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMNKFHL 594
+ ML ++ + + + I DG L+ DPW H L+++F L
Sbjct: 1029 RKMLRLRGWLRSVVEYRIGDGSDFFLWKDPWHHLGPLLDRFSL 1071
>ref|XP_013639556.1| PREDICTED: uncharacterized protein LOC106344792 [Brassica oleracea
var. oleracea]
Length = 1119
Score = 67.4 bits (163), Expect(2) = 6e-19
Identities = 27/90 (30%), Positives = 50/90 (55%)
Frame = +1
Query: 289 EGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCLQAASHSHIWK 468
EGGLG+ ++ D+ F +L+W S +SLWVAW ++ + S+W ++ S +W+
Sbjct: 762 EGGLGIRRVKDVDTVFSLKLIWRLFQSSNSLWVAWVKRYLLKQASFWDVRDTSAGSWVWR 821
Query: 469 NMLTMKDIMLRHINFEISDGCSIKLFTDPW 558
+L ++ + + EI +G +K + D W
Sbjct: 822 KLLKLRPLAKTFLRMEIRNGRRVKFWFDLW 851
Score = 54.7 bits (130), Expect(2) = 6e-19
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 35 PLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIILNLEKKM*NFV 214
PL+ ++ + S L+ AGRL+L+K VI+S +WC+ F LP I +E F+
Sbjct: 679 PLLTRIRDRFLSWTSSALAYAGRLQLIKSVIASITNFWCAAFCLPQGCIDEIESMCSAFL 738
Query: 215 WGSFEHNRKLHCLKWDSVCRPHRE 286
W + + W+ VC P E
Sbjct: 739 WSGSPNVTSKAKVSWEDVCCPKEE 762
>ref|XP_010430851.1| PREDICTED: uncharacterized protein LOC104715105 [Camelina sativa]
Length = 988
Score = 63.2 bits (152), Expect(2) = 8e-19
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Frame = +1
Query: 265 CLSSSQGREGGLGLCKLLDIIRAFKCRLVWDFLISKDSLWVAWFQKKYTEITSYWSCL-Q 441
CL S EGGLGL L + +L+W + +K SLWV W + S+WS
Sbjct: 678 CLPKS---EGGLGLRSLCEANNVSVLKLIWRIISAKGSLWVNWIHRYLIRSGSFWSEKDN 734
Query: 442 AASHSHIWKNMLTMKDIMLRHINFEISDGCSIKLFTDPWCHGDTLMNKFHLRMYRDMNLP 621
S S IWK +L KD+ + E+ +G S + D W L K R M +P
Sbjct: 735 TVSGSWIWKKLLKYKDLAKQFHRIEVYNGESTSFWFDDWSSLGRLYEKVGDRGCLSMGIP 794
Query: 622 KNALVA 639
++ VA
Sbjct: 795 ISSTVA 800
Score = 58.5 bits (140), Expect(2) = 8e-19
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +2
Query: 35 PLVDKVSRKLSSRNGLNLSLAGRLELVKIVISSYAYYWCSVFHLPASIILNLEKKM*NFV 214
PL++ + K++S LS AGRL+L++ VI S +W S + LP + I +++ F+
Sbjct: 600 PLLENIRSKINSWTARTLSFAGRLQLLRSVIFSITNFWISAYRLPKACIHEIDQLCSAFL 659
Query: 215 WGSFEHNRKLHCLKWDSVCRPHRE 286
W S N K L W VC P E
Sbjct: 660 WSSPTLNAKKIKLTWTEVCLPKSE 683