BLASTX nr result

ID: Cornus23_contig00031636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00031636
         (428 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KJB09782.1| hypothetical protein B456_001G165500 [Gossypium r...    85   2e-14
ref|XP_002535797.1| conserved hypothetical protein [Ricinus comm...    60   2e-10
ref|XP_002522075.1| conserved hypothetical protein [Ricinus comm...    48   1e-07
ref|XP_002535796.1| conserved hypothetical protein [Ricinus comm...    44   5e-07

>gb|KJB09782.1| hypothetical protein B456_001G165500 [Gossypium raimondii]
          Length = 732

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 62/140 (44%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
 Frame = +1

Query: 13  SNRFRAPLYLKEMVLDERIQISHYAVGWGESCSAKLGVQCSYGGTIDEIE*KGPSKKSEG 192
           S R R P YLK MVLDE IQI HYAVGWG SCSAKLGV                      
Sbjct: 201 SLRVRTPFYLKGMVLDETIQIPHYAVGWGGSCSAKLGVH--------------------- 239

Query: 193 VMKCS*AAKYQSRN---SIGAKGSVLHLLIVRESNSLSCHAFHSLA*VVLNHSFCLAFVL 363
             +   + +Y  +    S+  +  V   L+ R    LS   F S             FVL
Sbjct: 240 -RQVPVSQQYWRKRIGPSLADRSRVELALLPR----LSLTRFRS-------------FVL 281

Query: 364 HSLAITRRERSNQGAYYHIE 423
           HSLAITRRERSNQGAYYHIE
Sbjct: 282 HSLAITRRERSNQGAYYHIE 301


>ref|XP_002535797.1| conserved hypothetical protein [Ricinus communis]
           gi|223521923|gb|EEF26586.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 74

 Score = 60.1 bits (144), Expect(2) = 2e-10
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +3

Query: 201 MLVSRQVPVSQQYWRKRIGPSLADRSRVE 287
           +LVSRQVPVSQQYWRKRIGPSLADRSRVE
Sbjct: 2   LLVSRQVPVSQQYWRKRIGPSLADRSRVE 30



 Score = 32.0 bits (71), Expect(2) = 2e-10
 Identities = 18/28 (64%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +2

Query: 338 TLFVWHSFFTL-LLLPAGSAATKVHIII 418
           +LF++   F L  L PAGSAATKVHIII
Sbjct: 47  SLFLFGGSFVLHSLAPAGSAATKVHIII 74


>ref|XP_002522075.1| conserved hypothetical protein [Ricinus communis]
           gi|223538674|gb|EEF40275.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 207

 Score = 47.8 bits (112), Expect(2) = 1e-07
 Identities = 22/25 (88%), Positives = 22/25 (88%)
 Frame = +3

Query: 213 RQVPVSQQYWRKRIGPSLADRSRVE 287
           RQVPVSQQYW KRI PSL DRSRVE
Sbjct: 38  RQVPVSQQYWCKRISPSLVDRSRVE 62



 Score = 34.7 bits (78), Expect(2) = 1e-07
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +1

Query: 49  MVLDERIQISHYAVGWGES 105
           MVLDE IQI HY VGWG +
Sbjct: 1   MVLDETIQIPHYVVGWGSA 19


>ref|XP_002535796.1| conserved hypothetical protein [Ricinus communis]
           gi|223521922|gb|EEF26585.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 62

 Score = 44.3 bits (103), Expect(2) = 5e-07
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +3

Query: 126 SVFLWRNHRRNRIERAFKKERGSD 197
           SVFLWRNH R +IE+AFKKER SD
Sbjct: 36  SVFLWRNHTRKKIEKAFKKERESD 59



 Score = 36.2 bits (82), Expect(2) = 5e-07
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = +1

Query: 49  MVLDERIQISHYAVGWGES 105
           MVLDE IQI HYAVGWG +
Sbjct: 1   MVLDETIQIPHYAVGWGSA 19


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