BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00031466
         (289 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP05596.1| unnamed protein product [Coffea canephora]            163   5e-38
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   159   1e-36
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana...   159   1e-36
ref|XP_009623376.1| PREDICTED: probable RNA-dependent RNA polyme...   157   3e-36
ref|XP_009781107.1| PREDICTED: probable RNA-dependent RNA polyme...   157   4e-36
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       156   5e-36
ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   155   8e-36
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   155   8e-36
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]       155   1e-35
gb|ABO93004.1| putative RNA-dependent RNA-polymerase, partial [S...   155   1e-35
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   155   1e-35
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   155   1e-35
gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum de...   155   1e-35
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...   155   1e-35
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...   155   1e-35
gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tu...   155   1e-35
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola...   155   1e-35
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola...   155   1e-35
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu...   153   4e-35
gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solan...   153   4e-35

>emb|CDP05596.1| unnamed protein product [Coffea canephora]
          Length = 1112

 Score =  163 bits (412), Expect = 5e-38
 Identities = 75/95 (78%), Positives = 82/95 (86%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           FRLVDPQRI I YIEHALE LY LKECCYEP++WL  QY KY K  QLPK P +TLD GL
Sbjct: 294 FRLVDPQRIKIRYIEHALENLYMLKECCYEPVQWLKEQYDKYDKLRQLPKSPTLTLDDGL 353

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRVQ+TPCKVYFCGPEVN+SNRVLRN+SED+D
Sbjct: 354 VYVRRVQVTPCKVYFCGPEVNVSNRVLRNFSEDLD 388


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
           gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
           [Nicotiana glutinosa]
          Length = 1117

 Score =  159 bits (401), Expect = 1e-36
 Identities = 74/95 (77%), Positives = 83/95 (87%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           F+LVDP+R +I  IEHALEKLY LKECCY+P+RWL  QY +YLK  QLPK P+ITLD GL
Sbjct: 296 FQLVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSPSITLDDGL 355

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 356 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 390


>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
          Length = 1044

 Score =  159 bits (401), Expect = 1e-36
 Identities = 74/95 (77%), Positives = 83/95 (87%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           F+LVDP+R +I  IEHALEKLY LKECCY+P+RWL  QY +YLK  QLPK P+ITLD GL
Sbjct: 294 FQLVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKHRQLPKSPSITLDDGL 353

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 354 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 388


>ref|XP_009623376.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
           tomentosiformis] gi|697138603|ref|XP_009623378.1|
           PREDICTED: probable RNA-dependent RNA polymerase 1
           [Nicotiana tomentosiformis]
           gi|697138605|ref|XP_009623379.1| PREDICTED: probable
           RNA-dependent RNA polymerase 1 [Nicotiana
           tomentosiformis] gi|697138607|ref|XP_009623380.1|
           PREDICTED: probable RNA-dependent RNA polymerase 1
           [Nicotiana tomentosiformis]
          Length = 1116

 Score =  157 bits (397), Expect = 3e-36
 Identities = 73/95 (76%), Positives = 83/95 (87%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           F+LVDP+R +I  IEHALEKLY LKECCY+P+RWL  QY +YLK  QLPK P+ITLD GL
Sbjct: 295 FQLVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPSITLDDGL 354

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDI+
Sbjct: 355 VYVRRVVVTPCKVYFCGPEVNVSNRVLRNYSEDIN 389


>ref|XP_009781107.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
           sylvestris] gi|698458664|ref|XP_009781108.1| PREDICTED:
           probable RNA-dependent RNA polymerase 1 [Nicotiana
           sylvestris] gi|698458668|ref|XP_009781109.1| PREDICTED:
           probable RNA-dependent RNA polymerase 1 [Nicotiana
           sylvestris]
          Length = 1116

 Score =  157 bits (396), Expect = 4e-36
 Identities = 73/95 (76%), Positives = 82/95 (86%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           F+LVDP+R +I  IEHALEKLY LKECCY+P+RWL  QY +YL   QLPK P+ITLD GL
Sbjct: 295 FQLVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLNRRQLPKSPSITLDDGL 354

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 355 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 389


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  156 bits (395), Expect = 5e-36
 Identities = 73/95 (76%), Positives = 82/95 (86%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           F+LVDP+R +I  IEHALEKLY LKECCY+P+RWL  QY +YLK  QLPK P ITLD GL
Sbjct: 295 FQLVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPPITLDDGL 354

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDI+
Sbjct: 355 VYVRRVVVTPCKVYFCGPEVNVSNRVLRNYSEDIN 389


>ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Jatropha curcas]
          Length = 1096

 Score =  155 bits (393), Expect = 8e-36
 Identities = 70/95 (73%), Positives = 86/95 (90%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           ++LVDP R++I  IEHALEKL++LKECCYEP RWL+ QY KYLKS  LP+ P+I+LD+GL
Sbjct: 328 YKLVDPSRMNIDCIEHALEKLFHLKECCYEPSRWLDEQYRKYLKSKYLPRSPSISLDSGL 387

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRVQITPCKVYFCGPEVN+SNRV+R+YS+DI+
Sbjct: 388 VYVRRVQITPCKVYFCGPEVNVSNRVIRHYSKDIN 422


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
           gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
           [Solanum lycopersicum]
          Length = 1114

 Score =  155 bits (393), Expect = 8e-36
 Identities = 72/95 (75%), Positives = 81/95 (85%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           FRLVDP+R ++  IEHALEKLY +KECCY+P+RWL  QY  YLK  Q PK P+ITLD GL
Sbjct: 295 FRLVDPRRRNVACIEHALEKLYYIKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGL 354

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 355 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 389


>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
          Length = 479

 Score =  155 bits (391), Expect = 1e-35
 Identities = 73/95 (76%), Positives = 82/95 (86%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           F+LVDP+R +I  IEHALEKLY LKECCY+P+RWL  QY +YLK  QLPK P+ITLD GL
Sbjct: 295 FQLVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSPSITLDDGL 354

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYF GPEVN+SNRVLRNYSEDID
Sbjct: 355 VYVRRVVVTPCKVYFSGPEVNVSNRVLRNYSEDID 389


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase, partial [Solanum tuberosum]
          Length = 841

 Score =  155 bits (391), Expect = 1e-35
 Identities = 73/95 (76%), Positives = 80/95 (84%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           FRLVDPQR ++  IE ALEKLY LKECCY+P+RWL  QY  YLK  Q PK P+ITLD GL
Sbjct: 295 FRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGL 354

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 355 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 389


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  155 bits (391), Expect = 1e-35
 Identities = 73/95 (76%), Positives = 80/95 (84%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           FRLVDPQR ++  IE ALEKLY LKECCY+P+RWL  QY  YLK  Q PK P+ITLD GL
Sbjct: 295 FRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGL 354

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 355 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 389


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  155 bits (391), Expect = 1e-35
 Identities = 73/95 (76%), Positives = 80/95 (84%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           FRLVDPQR ++  IE ALEKLY LKECCY+P+RWL  QY  YLK  Q PK P+ITLD GL
Sbjct: 294 FRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGL 353

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 354 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 388


>gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1021

 Score =  155 bits (391), Expect = 1e-35
 Identities = 73/95 (76%), Positives = 80/95 (84%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           FRLVDPQR ++  IE ALEKLY LKECCY+P+RWL  QY  YLK  Q PK P+ITLD GL
Sbjct: 143 FRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGL 202

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 203 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 237


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score =  155 bits (391), Expect = 1e-35
 Identities = 73/95 (76%), Positives = 80/95 (84%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           FRLVDPQR ++  IE ALEKLY LKECCY+P+RWL  QY  YLK  Q PK P+ITLD GL
Sbjct: 287 FRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGL 346

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 347 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 381


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score =  155 bits (391), Expect = 1e-35
 Identities = 73/95 (76%), Positives = 80/95 (84%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           FRLVDPQR ++  IE ALEKLY LKECCY+P+RWL  QY  YLK  Q PK P+ITLD GL
Sbjct: 261 FRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGL 320

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 321 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 355


>gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tuberosum]
          Length = 1050

 Score =  155 bits (391), Expect = 1e-35
 Identities = 73/95 (76%), Positives = 80/95 (84%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           FRLVDPQR ++  IE ALEKLY LKECCY+P+RWL  QY  YLK  Q PK P+ITLD GL
Sbjct: 143 FRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGL 202

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 203 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 237


>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  155 bits (391), Expect = 1e-35
 Identities = 73/95 (76%), Positives = 80/95 (84%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           FRLVDPQR ++  IE ALEKLY LKECCY+P+RWL  QY  YLK  Q PK P+ITLD GL
Sbjct: 143 FRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGL 202

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 203 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 237


>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  155 bits (391), Expect = 1e-35
 Identities = 73/95 (76%), Positives = 80/95 (84%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           FRLVDPQR ++  IE ALEKLY LKECCY+P+RWL  QY  YLK  Q PK P+ITLD GL
Sbjct: 143 FRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGL 202

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 203 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 237


>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 935

 Score =  153 bits (387), Expect = 4e-35
 Identities = 72/95 (75%), Positives = 79/95 (83%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           FRLVDPQR ++  IE ALEKLY LKECCY+P+RWL  QY  Y K  Q PK P+ITLD GL
Sbjct: 295 FRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYFKGRQPPKSPSITLDDGL 354

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 355 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 389


>gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solanum demissum]
          Length = 1137

 Score =  153 bits (387), Expect = 4e-35
 Identities = 72/95 (75%), Positives = 79/95 (83%)
 Frame = -3

Query: 287 FRLVDPQRIDIHYIEHALEKLYNLKECCYEPLRWLNAQYGKYLKSGQLPKPPAITLDAGL 108
           FRLVDPQR ++  IE ALEKLY LKECCY+P+RWL  QY  Y K  Q PK P+ITLD GL
Sbjct: 331 FRLVDPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYFKGRQPPKSPSITLDDGL 390

Query: 107 VYVRRVQITPCKVYFCGPEVNMSNRVLRNYSEDID 3
           VYVRRV +TPCKVYFCGPEVN+SNRVLRNYSEDID
Sbjct: 391 VYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDID 425