BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00031401
         (356 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005647319.1| photosystem I PsaO [Coccomyxa subellipsoidea...    47   2e-09
ref|XP_001700109.1| photosystem I subunit O [Chlamydomonas reinh...    48   2e-09
gb|ABA01097.1| chloroplast putative 16 kDa membrane protein [Chl...    48   4e-09
ref|XP_002950988.1| photosystem I reaction center subunit O [Vol...    45   7e-08

>ref|XP_005647319.1| photosystem I PsaO [Coccomyxa subellipsoidea C-169]
           gi|384249293|gb|EIE22775.1| photosystem I PsaO
           [Coccomyxa subellipsoidea C-169]
          Length = 142

 Score = 47.4 bits (111), Expect(2) = 2e-09
 Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = -3

Query: 231 AKLAASP-LRAQRSQRSVTRMAGGENYPANWIRTNPLVPVLGFVGWT 94
           A LA +P +R+    R+VT  AG E YP+NW+  +PLV VLGF+GWT
Sbjct: 27  APLAVAPRIRSAAPARNVTICAGQE-YPSNWLNKDPLVFVLGFLGWT 72



 Score = 41.2 bits (95), Expect(2) = 2e-09
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = -1

Query: 92  PTSIGVPVLGGNSLFQLFLASIGDNLAAFP 3
           P +IGV   GGNSLF  F  SIG+NLA FP
Sbjct: 74  PANIGVSAFGGNSLFGSFTQSIGENLARFP 103


>ref|XP_001700109.1| photosystem I subunit O [Chlamydomonas reinhardtii]
           gi|158272605|gb|EDO98403.1| photosystem I subunit O
           [Chlamydomonas reinhardtii]
          Length = 126

 Score = 47.8 bits (112), Expect(2) = 2e-09
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = -3

Query: 225 LAASPLRAQRSQRSVTRMAGGENYPANWIRTNPLVPVLGFVGWT 94
           LA+ P  + R    V   A  +++P +W++T+PLVPVLGF GWT
Sbjct: 13  LASRPRVSSRRSVVVRAEASNKSFPRDWVKTDPLVPVLGFAGWT 56



 Score = 40.8 bits (94), Expect(2) = 2e-09
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = -1

Query: 92  PTSIGVPVLGGNSLFQLFLASIGDNLAAFP 3
           P +IGV   GG SLF LF  SIG+NLA FP
Sbjct: 58  PANIGVSAFGGQSLFGLFTQSIGENLAHFP 87


>gb|ABA01097.1| chloroplast putative 16 kDa membrane protein [Chlamydomonas
           incerta]
          Length = 126

 Score = 47.8 bits (112), Expect(2) = 4e-09
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = -3

Query: 225 LAASPLRAQRSQRSVTRMAGGENYPANWIRTNPLVPVLGFVGWT 94
           LA+ P  + R    V   A  +++P +W++T+PLVPVLGF GWT
Sbjct: 13  LASRPRVSSRRSVVVRAEASNKSFPRDWVKTDPLVPVLGFAGWT 56



 Score = 39.7 bits (91), Expect(2) = 4e-09
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = -1

Query: 92  PTSIGVPVLGGNSLFQLFLASIGDNLAAFP 3
           P +IGV   GG SLF LF  SIG+NLA FP
Sbjct: 58  PANIGVSGFGGQSLFGLFTQSIGENLAHFP 87


>ref|XP_002950988.1| photosystem I reaction center subunit O [Volvox carteri f.
           nagariensis] gi|300263683|gb|EFJ47882.1| photosystem I
           reaction center subunit O [Volvox carteri f.
           nagariensis]
          Length = 126

 Score = 45.4 bits (106), Expect(2) = 7e-08
 Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 5/50 (10%)
 Frame = -3

Query: 228 KLAASPLRAQR---SQRSVTRMAGGEN--YPANWIRTNPLVPVLGFVGWT 94
           + +A P  AQR   S+R+V   A   N  +P +WI+++PLVPVLGF GWT
Sbjct: 7   RASALPTLAQRPRVSRRAVIVRAEASNKAFPRDWIKSDPLVPVLGFAGWT 56



 Score = 37.7 bits (86), Expect(2) = 7e-08
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = -1

Query: 92  PTSIGVPVLGGNSLFQLFLASIGDNLAAFP 3
           P++IGV   GG SLF LF  SIG+ LA FP
Sbjct: 58  PSNIGVSGFGGQSLFGLFTQSIGEQLAHFP 87